RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 CHADLQ6NUI6 762 aa12.03□□□□□ -0.48
RTN3-208ENST00000537981 GRAMD1CQ8IYS0 662 aa12.03□□□□□ -0.48
RTN3-208ENST00000537981 STK11IPQ8N1F8 1099 aa12.03□□□□□ -0.48
RTN3-208ENST00000537981 RASSF8Q8NHQ8 419 aa12.03□□□□□ -0.48
RTN3-208ENST00000537981 ATP6V0A4Q9HBG4 840 aa12.03□□□□□ -0.48
RTN3-208ENST00000537981 SEC31BQ9NQW1 1179 aa12.03□□□□□ -0.48
RTN3-208ENST00000537981 ECHDC1Q9NTX5 307 aa12.03□□□□□ -0.48
RTN3-208ENST00000537981 PCDHA5Q9Y5H7 936 aa12.03□□□□□ -0.48
RTN3-208ENST00000537981 STK24Q9Y6E0 443 aa12.03□□□□□ -0.48
RTN3-208ENST00000537981 MAP3K5Q99683 1374 aa12.02□□□□□ -0.48
RTN3-208ENST00000537981 MYH13Q9UKX3 1938 aa12.02□□□□□ -0.48
RTN3-208ENST00000537981 AKR1B15C9JRZ8 316 aaPredicted RBP12.02□□□□□ -0.48
RTN3-208ENST00000537981 CYP21A2P08686 494 aa12.02□□□□□ -0.48
RTN3-208ENST00000537981 CASP14P31944 242 aa12.02□□□□□ -0.48
RTN3-208ENST00000537981 PIP4K2BP78356 416 aa12.02□□□□□ -0.48
RTN3-208ENST00000537981 SLC7A5Q01650 507 aa12.02□□□□□ -0.48
RTN3-208ENST00000537981 PPARAQ07869 468 aa12.02□□□□□ -0.48
RTN3-208ENST00000537981 MYO1EQ12965 1108 aa12.02□□□□□ -0.48
RTN3-208ENST00000537981 CCNI2Q6ZMN8 369 aaPredicted RBP12.02□□□□□ -0.48
RTN3-208ENST00000537981 RASGRP2Q7LDG7 609 aa12.02□□□□□ -0.48
RTN3-208ENST00000537981 HDGFL2Q7Z4V5 671 aaPredicted RBP12.02□□□□□ -0.48
RTN3-208ENST00000537981 NSMCE1Q8WV22 266 aa12.02□□□□□ -0.48
RTN3-208ENST00000537981 CCDC114Q96M63 670 aa12.02□□□□□ -0.48
RTN3-208ENST00000537981 SLF1Q9BQI6 1058 aa12.02□□□□□ -0.48
RTN3-208ENST00000537981 NUP58Q9BVL2 599 aa12.02□□□□□ -0.48
RTN3-208ENST00000537981 L3MBTL1Q9Y468 752 aa12.02□□□□□ -0.48
RTN3-208ENST00000537981 LGR5O75473 907 aa12.02□□□□□ -0.49
RTN3-208ENST00000537981 EZRP15311 586 aaKnown RBP12.02□□□□□ -0.49
RTN3-208ENST00000537981 ZNF18P17022 549 aa12.02□□□□□ -0.49
RTN3-208ENST00000537981 SHC4Q6S5L8 630 aa12.02□□□□□ -0.49
RTN3-208ENST00000537981 B4GALNT4Q76KP1 1039 aa12.02□□□□□ -0.49
RTN3-208ENST00000537981 BZW1Q7L1Q6 419 aaKnown RBP12.02□□□□□ -0.49
RTN3-208ENST00000537981 DMGDHQ9UI17 866 aaKnown RBP12.02□□□□□ -0.49
RTN3-208ENST00000537981 GUCA1BQ9UMX6 200 aa12.02□□□□□ -0.49
RTN3-208ENST00000537981 CARMIL3Q8ND23 1372 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 MED23Q9ULK4 1368 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 TMCO5BA8MYB1 307 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 TAF5LO75529 589 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 RWDD2BP57060 319 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 QPCTQ16769 361 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 CCDC181Q5TID7 509 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 AACSQ86V21 672 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 FSD1Q9BTV5 496 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 CDK19Q9BWU1 502 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 ALDH8A1Q9H2A2 487 aaPredicted RBP12.01□□□□□ -0.49
RTN3-208ENST00000537981 BSDC1Q9NW68 430 aaPredicted RBP12.01□□□□□ -0.49
RTN3-208ENST00000537981 SMARCAL1Q9NZC9 954 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 FAM208AQ9UK61 1670 aaKnown RBP12.01□□□□□ -0.49
RTN3-208ENST00000537981 ATXN2Q99700 1313 aaKnown RBP12.01□□□□□ -0.49
RTN3-208ENST00000537981 SALL1Q9NSC2 1324 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 PECAM1P16284 738 aaPredicted RBP12.01□□□□□ -0.49
RTN3-208ENST00000537981 SYKP43405 635 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 CDR1P51861 262 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 TRAPPC11Q7Z392 1133 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 OR8K1Q8NGG5 319 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 MYCBPAPQ8TBZ2 947 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 AENQ8WTP8 325 aaKnown RBP12.01□□□□□ -0.49
RTN3-208ENST00000537981 CCT8L2Q96SF2 557 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 STK31Q9BXU1 1019 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 NUCKS1Q9H1E3 243 aaKnown RBP12.01□□□□□ -0.49
RTN3-208ENST00000537981 KLHL42Q9P2K6 505 aa12.01□□□□□ -0.49
RTN3-208ENST00000537981 REXO2Q9Y3B8 237 aaKnown RBP12.01□□□□□ -0.49
RTN3-208ENST00000537981 USP42Q9H9J4 1324 aaKnown RBP12.01□□□□□ -0.49
RTN3-208ENST00000537981 NR1I3Q14994 352 aa12□□□□□ -0.49
RTN3-208ENST00000537981 SLC9C2Q5TAH2 1124 aa12□□□□□ -0.49
RTN3-208ENST00000537981 VTI1AQ96AJ9 217 aa12□□□□□ -0.49
RTN3-208ENST00000537981 LMCD1Q9NZU5 365 aa12□□□□□ -0.49
RTN3-208ENST00000537981 EID1Q9Y6B2 187 aa12□□□□□ -0.49
RTN3-208ENST00000537981 TMEM2Q9UHN6 1383 aa12□□□□□ -0.49
RTN3-208ENST00000537981 IPO7O95373 1038 aaKnown RBP12□□□□□ -0.49
RTN3-208ENST00000537981 SKOR1P84550 965 aa12□□□□□ -0.49
RTN3-208ENST00000537981 C6orf89Q6UWU4 347 aa12□□□□□ -0.49
RTN3-208ENST00000537981 MAEAQ7L5Y9 396 aa12□□□□□ -0.49
RTN3-208ENST00000537981 APTXQ7Z2E3 356 aaKnown RBP12□□□□□ -0.49
RTN3-208ENST00000537981 TRIM74Q86UV6 250 aa12□□□□□ -0.49
RTN3-208ENST00000537981 TRIM73Q86UV7 250 aa12□□□□□ -0.49
RTN3-208ENST00000537981 SAAL1Q96ER3 474 aa12□□□□□ -0.49
RTN3-208ENST00000537981 ZNF570Q96NI8 536 aa12□□□□□ -0.49
RTN3-208ENST00000537981 GYPCP04921 128 aa11.99□□□□□ -0.49
RTN3-208ENST00000537981 AMPHP49418 695 aa11.99□□□□□ -0.49
RTN3-208ENST00000537981 ICA1Q05084 483 aa11.99□□□□□ -0.49
RTN3-208ENST00000537981 MIS18BP1Q6P0N0 1132 aa11.99□□□□□ -0.49
RTN3-208ENST00000537981 NLRP14Q86W24 1093 aa11.99□□□□□ -0.49
RTN3-208ENST00000537981 MAB21L3Q8N8X9 362 aa11.99□□□□□ -0.49
RTN3-208ENST00000537981 EAF2Q96CJ1 260 aaPredicted RBP11.99□□□□□ -0.49
RTN3-208ENST00000537981 EPN3Q9H201 632 aa11.99□□□□□ -0.49
RTN3-208ENST00000537981 EHD2Q9NZN4 543 aa11.99□□□□□ -0.49
RTN3-208ENST00000537981 STRCQ7RTU9 1775 aa11.99□□□□□ -0.49
RTN3-208ENST00000537981 KIF4AO95239 1232 aa11.99□□□□□ -0.49
RTN3-208ENST00000537981 ANXA1P04083 346 aa11.99□□□□□ -0.49
RTN3-208ENST00000537981 STX17P56962 302 aa11.99□□□□□ -0.49
RTN3-208ENST00000537981 EIF4A2Q14240 407 aaKnown RBP11.99□□□□□ -0.49
RTN3-208ENST00000537981 PTGISQ16647 500 aa11.99□□□□□ -0.49
RTN3-208ENST00000537981 AIFM3Q96NN9 605 aa11.99□□□□□ -0.49
RTN3-208ENST00000537981 ZIM3Q96PE6 472 aa11.99□□□□□ -0.49
RTN3-208ENST00000537981 CHP1Q99653 195 aa11.99□□□□□ -0.49
RTN3-208ENST00000537981 PPANQ9NQ55 473 aaKnown RBP11.99□□□□□ -0.49
RTN3-208ENST00000537981 BIN2Q9UBW5 565 aaPredicted RBP11.99□□□□□ -0.49
RTN3-208ENST00000537981 ZNF335Q9H4Z2 1342 aaPredicted RBP11.99□□□□□ -0.49
RTN3-208ENST00000537981 UBR1Q8IWV7 1749 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms