RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 NMT2O60551 498 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 KRT2P35908 639 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 CCDC186Q7Z3E2 898 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 DGKHQ86XP1 1220 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 SRBD1Q8N5C6 995 aaKnown RBP10.7□□□□□ -0.7
UBE3B-207ENST00000537063 NRBP1Q9UHY1 535 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 BECN2A8MW95 431 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 BBOX1O75936 387 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 USP17L8P0C7I0 530 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 CCDC144BQ3MJ40 725 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 HSD3B7Q9H2F3 369 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 CD209Q9NNX6 404 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 IL17RBQ9NRM6 502 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 VPS54Q9P1Q0 977 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.7□□□□□ -0.7
UBE3B-207ENST00000537063 NPHP1O15259 732 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 LONRF3Q496Y0 759 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 CCDC82Q8N4S0 544 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 FAM163AQ96GL9 167 aaPredicted RBP10.7□□□□□ -0.7
UBE3B-207ENST00000537063 MCM9Q9NXL9 1143 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 GAKO14976 1311 aa10.7□□□□□ -0.7
UBE3B-207ENST00000537063 LDHCP07864 332 aa10.69□□□□□ -0.7
UBE3B-207ENST00000537063 AKAP17AQ02040 695 aaKnown RBP10.69□□□□□ -0.7
UBE3B-207ENST00000537063 GRIN1Q05586 938 aa10.69□□□□□ -0.7
UBE3B-207ENST00000537063 PFKFB3Q16875 520 aaPredicted RBP10.69□□□□□ -0.7
UBE3B-207ENST00000537063 CCDC178Q5BJE1 867 aa10.69□□□□□ -0.7
UBE3B-207ENST00000537063 EARS2Q5JPH6 523 aaKnown RBP10.69□□□□□ -0.7
UBE3B-207ENST00000537063 FAM47AQ5JRC9 791 aa10.69□□□□□ -0.7
UBE3B-207ENST00000537063 TMC4Q7Z404 712 aa10.69□□□□□ -0.7
UBE3B-207ENST00000537063 JAG2Q9Y219 1238 aa10.69□□□□□ -0.7
UBE3B-207ENST00000537063 V9GY48 417 aaPredicted RBP10.69□□□□□ -0.7
UBE3B-207ENST00000537063 GPR75-ASB3A0A0A6YYF3 556 aa10.69□□□□□ -0.7
UBE3B-207ENST00000537063 BAG3O95817 575 aa10.69□□□□□ -0.7
UBE3B-207ENST00000537063 BMP15O95972 392 aa10.69□□□□□ -0.7
UBE3B-207ENST00000537063 CTCFLQ8NI51 663 aaPredicted RBP10.69□□□□□ -0.7
UBE3B-207ENST00000537063 GGA1Q9UJY5 639 aa10.69□□□□□ -0.7
UBE3B-207ENST00000537063 R3HCC1Q9Y3T6 440 aaKnown RBP10.69□□□□□ -0.7
UBE3B-207ENST00000537063 C10orf71Q711Q0 1435 aa10.69□□□□□ -0.7
UBE3B-207ENST00000537063 NEMFO60524 1076 aa10.69□□□□□ -0.7
UBE3B-207ENST00000537063 UFL1O94874 794 aa10.69□□□□□ -0.7
UBE3B-207ENST00000537063 SARSP49591 514 aaKnown RBP10.69□□□□□ -0.7
UBE3B-207ENST00000537063 DIXDC1Q155Q3 683 aa10.69□□□□□ -0.7
UBE3B-207ENST00000537063 C17orf53Q8N3J3 647 aaPredicted RBP10.69□□□□□ -0.7
UBE3B-207ENST00000537063 SPATA20Q8TB22 786 aa10.69□□□□□ -0.7
UBE3B-207ENST00000537063 OSBPL5Q9H0X9 879 aaPredicted RBP10.69□□□□□ -0.7
UBE3B-207ENST00000537063 CABP5Q9NP86 173 aa10.69□□□□□ -0.7
UBE3B-207ENST00000537063 FAM205AQ6ZU69 1335 aa10.68□□□□□ -0.7
UBE3B-207ENST00000537063 MYO1BO43795 1136 aa10.68□□□□□ -0.7
UBE3B-207ENST00000537063 SCG2P13521 617 aa10.68□□□□□ -0.7
UBE3B-207ENST00000537063 HMGB2P26583 209 aaKnown RBP10.68□□□□□ -0.7
UBE3B-207ENST00000537063 PNOCQ13519 176 aa10.68□□□□□ -0.7
UBE3B-207ENST00000537063 GRM4Q14833 912 aa10.68□□□□□ -0.7
UBE3B-207ENST00000537063 FOXP4Q8IVH2 680 aaPredicted RBP10.68□□□□□ -0.7
UBE3B-207ENST00000537063 ANO8Q9HCE9 1232 aaPredicted RBP10.68□□□□□ -0.7
UBE3B-207ENST00000537063 SH3GLB2Q9NR46 395 aa10.68□□□□□ -0.7
UBE3B-207ENST00000537063 GREB1LQ9C091 1923 aaPredicted RBP10.68□□□□□ -0.7
UBE3B-207ENST00000537063 FAM205CA6NFA0 338 aa10.68□□□□□ -0.7
UBE3B-207ENST00000537063 TRIM75PA6NK02 468 aa10.68□□□□□ -0.7
UBE3B-207ENST00000537063 TSPY2A6NKD2 308 aa10.68□□□□□ -0.7
UBE3B-207ENST00000537063 ACTN4O43707 911 aaKnown RBP10.68□□□□□ -0.7
UBE3B-207ENST00000537063 TBC1D16Q8TBP0 767 aa10.68□□□□□ -0.7
UBE3B-207ENST00000537063 CACTINQ8WUQ7 758 aaKnown RBP10.68□□□□□ -0.7
UBE3B-207ENST00000537063 GPR101Q96P66 508 aaPredicted RBP10.68□□□□□ -0.7
UBE3B-207ENST00000537063 FAM13BQ9NYF5 915 aa10.68□□□□□ -0.7
UBE3B-207ENST00000537063 SMTNL1A8MU46 457 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 KIF5BP33176 963 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 USP5P45974 858 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 TRAPPC10P48553 1259 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 NOVP48745 357 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 ZRSR1Q15695 479 aaKnown RBP10.67□□□□□ -0.7
UBE3B-207ENST00000537063 FAM177A1Q8N128 213 aaPredicted RBP10.67□□□□□ -0.7
UBE3B-207ENST00000537063 QTRT2Q9H974 415 aaKnown RBP10.67□□□□□ -0.7
UBE3B-207ENST00000537063 KCND1Q9NSA2 647 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 IMPACTQ9P2X3 320 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 POLLQ9UGP5 575 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 PLIN4Q96Q06 1357 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 LRMPQ12912 555 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 KRT27Q7Z3Y8 459 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 LRRC8AQ8IWT6 810 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 PROM2Q8N271 834 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 FERMT2Q96AC1 680 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 PRIMPOLQ96LW4 560 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 BRMS1Q9HCU9 246 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 TNS1Q9HBL0 1735 aaKnown RBP10.67□□□□□ -0.7
UBE3B-207ENST00000537063 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.67□□□□□ -0.7
UBE3B-207ENST00000537063 RASA1P20936 1047 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 BMP6P22004 513 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 RHBDL3P58872 404 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 TFAP4Q01664 338 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 C16orf86Q6ZW13 317 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 DRC7Q8IY82 874 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 CNNM3Q8NE01 707 aa10.67□□□□□ -0.7
UBE3B-207ENST00000537063 MYH8P13535 1937 aa10.66□□□□□ -0.7
UBE3B-207ENST00000537063 BIN1O00499 593 aa10.66□□□□□ -0.7
UBE3B-207ENST00000537063 WNT7AO00755 349 aa10.66□□□□□ -0.7
UBE3B-207ENST00000537063 ATP2C1P98194 919 aaPredicted RBP10.66□□□□□ -0.7
UBE3B-207ENST00000537063 TBC1D22AQ8WUA7 517 aa10.66□□□□□ -0.7
UBE3B-207ENST00000537063 DYNLL2Q96FJ2 89 aa10.66□□□□□ -0.7
UBE3B-207ENST00000537063 CSRNP2Q9H175 543 aa10.66□□□□□ -0.7
UBE3B-207ENST00000537063 MAD2L2Q9UI95 211 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms