RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 EVI5O60447 810 aa23.86■■□□□ 1.41
TNFRSF1B-204ENST00000536782 PLCD1P51178 756 aa23.86■■□□□ 1.41
TNFRSF1B-204ENST00000536782 TRIM32Q13049 653 aa23.86■■□□□ 1.41
TNFRSF1B-204ENST00000536782 Q3C1V9 767 aa23.86■■□□□ 1.41
TNFRSF1B-204ENST00000536782 PAWRQ96IZ0 340 aaKnown RBP23.86■■□□□ 1.41
TNFRSF1B-204ENST00000536782 DNAJC2Q99543 621 aaKnown RBP23.86■■□□□ 1.41
TNFRSF1B-204ENST00000536782 USP17L15C9J2P7 530 aa23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 USP17L13C9JLJ4 530 aa23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 USP17L11C9JVI0 530 aa23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 USP17L18D6R9N7 530 aa23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 USP17L22D6RA61 530 aa23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 USP17L17D6RBQ6 530 aa23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 USP17L19D6RCP7 530 aa23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 USP17L20D6RJB6 530 aa23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 GOLIM4O00461 696 aa23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 XRCC5P13010 732 aaKnown RBP23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 SHMT1P34896 483 aa23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 USP17L24Q0WX57 530 aa23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 NECAB2Q7Z6G3 386 aa23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 SIRT2Q8IXJ6 389 aa23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 ANKLE1Q8NAG6 615 aa23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 KIAA1683Q9H0B3 1180 aa23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 BCL11AQ9H165 835 aa23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 CHMP4BQ9H444 224 aaKnown RBP23.85■■□□□ 1.41
TNFRSF1B-204ENST00000536782 ZNF532Q9HCE3 1301 aa23.84■■□□□ 1.41
TNFRSF1B-204ENST00000536782 RAB11FIP3O75154 756 aa23.84■■□□□ 1.41
TNFRSF1B-204ENST00000536782 GPR142Q7Z601 462 aa23.84■■□□□ 1.41
TNFRSF1B-204ENST00000536782 TRMT44Q8IYL2 757 aaKnown RBP23.84■■□□□ 1.41
TNFRSF1B-204ENST00000536782 PORCNQ9H237 461 aa23.84■■□□□ 1.41
TNFRSF1B-204ENST00000536782 MCM9Q9NXL9 1143 aa23.84■■□□□ 1.41
TNFRSF1B-204ENST00000536782 POTEEQ6S8J3 1075 aa23.83■■□□□ 1.41
TNFRSF1B-204ENST00000536782 PLEKHH3Q7Z736 793 aa23.83■■□□□ 1.41
TNFRSF1B-204ENST00000536782 ACER1Q8TDN7 264 aa23.83■■□□□ 1.41
TNFRSF1B-204ENST00000536782 DIS3LQ8TF46 1054 aaKnown RBP23.83■■□□□ 1.41
TNFRSF1B-204ENST00000536782 RABGAP1Q9Y3P9 1069 aa23.83■■□□□ 1.41
TNFRSF1B-204ENST00000536782 PRKAR2AP13861 404 aaKnown RBP23.82■■□□□ 1.4
TNFRSF1B-204ENST00000536782 RGS2P41220 211 aa23.82■■□□□ 1.4
TNFRSF1B-204ENST00000536782 GABPAQ06546 454 aa23.82■■□□□ 1.4
TNFRSF1B-204ENST00000536782 MAP3K21Q5TCX8 1036 aa23.82■■□□□ 1.4
TNFRSF1B-204ENST00000536782 CATSPERGQ6ZRH7 1159 aa23.82■■□□□ 1.4
TNFRSF1B-204ENST00000536782 USP6NLQ92738 828 aa23.82■■□□□ 1.4
TNFRSF1B-204ENST00000536782 CWC22Q9HCG8 908 aaKnown RBP23.82■■□□□ 1.4
TNFRSF1B-204ENST00000536782 DDX60LQ5H9U9 1706 aaKnown RBP23.81■■□□□ 1.4
TNFRSF1B-204ENST00000536782 TCRBV5S4A2TA0A5A2 114 aa23.81■■□□□ 1.4
TNFRSF1B-204ENST00000536782 ZKSCAN1P17029 563 aaPredicted RBP23.81■■□□□ 1.4
TNFRSF1B-204ENST00000536782 VCAM1P19320 739 aa23.81■■□□□ 1.4
TNFRSF1B-204ENST00000536782 CCNA1P78396 465 aa23.81■■□□□ 1.4
TNFRSF1B-204ENST00000536782 MORN1Q5T089 497 aa23.81■■□□□ 1.4
TNFRSF1B-204ENST00000536782 CNMDO75829 334 aa23.8■■□□□ 1.4
TNFRSF1B-204ENST00000536782 GUCY1A2P33402 732 aa23.8■■□□□ 1.4
TNFRSF1B-204ENST00000536782 LCORLQ8N3X6 602 aa23.8■■□□□ 1.4
TNFRSF1B-204ENST00000536782 SDR42E1Q8WUS8 393 aa23.8■■□□□ 1.4
TNFRSF1B-204ENST00000536782 NBPF3Q9H094 633 aa23.8■■□□□ 1.4
TNFRSF1B-204ENST00000536782 DCP1AQ9NPI6 582 aaPredicted RBP23.8■■□□□ 1.4
TNFRSF1B-204ENST00000536782 MPHOSPH10O00566 681 aaKnown RBP23.79■■□□□ 1.4
TNFRSF1B-204ENST00000536782 GLRX3O76003 335 aaKnown RBP23.79■■□□□ 1.4
TNFRSF1B-204ENST00000536782 MNX1P50219 401 aaPredicted RBP23.79■■□□□ 1.4
TNFRSF1B-204ENST00000536782 SEPT2Q15019 361 aa23.79■■□□□ 1.4
TNFRSF1B-204ENST00000536782 LBX2Q6XYB7 198 aa23.79■■□□□ 1.4
TNFRSF1B-204ENST00000536782 EDC3Q96F86 508 aaKnown RBP23.79■■□□□ 1.4
TNFRSF1B-204ENST00000536782 APBA2Q99767 749 aa23.79■■□□□ 1.4
TNFRSF1B-204ENST00000536782 BOLA2Q9H3K6 86 aa23.79■■□□□ 1.4
TNFRSF1B-204ENST00000536782 PAG1Q9NWQ8 432 aa23.79■■□□□ 1.4
TNFRSF1B-204ENST00000536782 RCAN3Q9UKA8 241 aa23.79■■□□□ 1.4
TNFRSF1B-204ENST00000536782 OGDHLQ9ULD0 1010 aa23.79■■□□□ 1.4
TNFRSF1B-204ENST00000536782 NAV1Q8NEY1 1877 aa23.79■■□□□ 1.4
TNFRSF1B-204ENST00000536782 CACNB2Q08289 660 aaPredicted RBP23.78■■□□□ 1.4
TNFRSF1B-204ENST00000536782 RPAP3Q9H6T3 665 aaPredicted RBP23.78■■□□□ 1.4
TNFRSF1B-204ENST00000536782 ARMT1Q9H993 441 aa23.78■■□□□ 1.4
TNFRSF1B-204ENST00000536782 ATP5JP18859 108 aa23.77■■□□□ 1.4
TNFRSF1B-204ENST00000536782 EVX2Q03828 476 aa23.77■■□□□ 1.4
TNFRSF1B-204ENST00000536782 MAP2K5Q13163 448 aa23.77■■□□□ 1.4
TNFRSF1B-204ENST00000536782 CCL14Q16627 93 aa23.77■■□□□ 1.4
TNFRSF1B-204ENST00000536782 WDR78Q5VTH9 848 aa23.77■■□□□ 1.4
TNFRSF1B-204ENST00000536782 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.77■■□□□ 1.4
TNFRSF1B-204ENST00000536782 C11orf49Q9H6J7 331 aa23.77■■□□□ 1.4
TNFRSF1B-204ENST00000536782 FRMPD3Q5JV73 1810 aa23.77■■□□□ 1.4
TNFRSF1B-204ENST00000536782 COL6A3P12111 3177 aa23.77■■□□□ 1.39
TNFRSF1B-204ENST00000536782 DNAH12Q6ZR08 3092 aa23.76■■□□□ 1.39
TNFRSF1B-204ENST00000536782 ADD2P35612 726 aa23.76■■□□□ 1.39
TNFRSF1B-204ENST00000536782 SWAP70Q9UH65 585 aa23.76■■□□□ 1.39
TNFRSF1B-204ENST00000536782 SPDYE16A6NNV3 312 aaPredicted RBP23.75■■□□□ 1.39
TNFRSF1B-204ENST00000536782 MBD4O95243 580 aa23.75■■□□□ 1.39
TNFRSF1B-204ENST00000536782 CYP2D6P10635 497 aa23.75■■□□□ 1.39
TNFRSF1B-204ENST00000536782 TMEM179Q6ZVK1 233 aa23.75■■□□□ 1.39
TNFRSF1B-204ENST00000536782 HAUS7Q99871 368 aa23.75■■□□□ 1.39
TNFRSF1B-204ENST00000536782 ATP8A2Q9NTI2 1148 aa23.75■■□□□ 1.39
TNFRSF1B-204ENST00000536782 BTBD7Q9P203 1132 aa23.75■■□□□ 1.39
TNFRSF1B-204ENST00000536782 IVNS1ABPQ9Y6Y0 642 aa23.75■■□□□ 1.39
TNFRSF1B-204ENST00000536782 A0A1W2PPC1 479 aa23.74■■□□□ 1.39
TNFRSF1B-204ENST00000536782 A0A1W2PRG0 241 aa23.74■■□□□ 1.39
TNFRSF1B-204ENST00000536782 SLC15A5A6NIM6 579 aa23.74■■□□□ 1.39
TNFRSF1B-204ENST00000536782 PRKAB2O43741 272 aa23.74■■□□□ 1.39
TNFRSF1B-204ENST00000536782 PTPREP23469 700 aa23.74■■□□□ 1.39
TNFRSF1B-204ENST00000536782 CCND3P30281 292 aaPredicted RBP23.74■■□□□ 1.39
TNFRSF1B-204ENST00000536782 C7orf61Q8IZ16 206 aa23.74■■□□□ 1.39
TNFRSF1B-204ENST00000536782 SLC44A5Q8NCS7 719 aa23.74■■□□□ 1.39
TNFRSF1B-204ENST00000536782 COG2Q14746 738 aa23.73■■□□□ 1.39
TNFRSF1B-204ENST00000536782 SLFNL1Q499Z3 407 aa23.73■■□□□ 1.39
TNFRSF1B-204ENST00000536782 DYNLL2Q96FJ2 89 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms