RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 PRAMEF18Q5VWM3 479 aa8.91□□□□□ -0.98
CPSF7-216ENST00000536548 NBPF10Q6P3W6 841 aaKnown RBP8.91□□□□□ -0.98
CPSF7-216ENST00000536548 DPP8Q6V1X1 898 aaPredicted RBP8.91□□□□□ -0.98
CPSF7-216ENST00000536548 ZNF589Q86UQ0 364 aaPredicted RBP8.91□□□□□ -0.98
CPSF7-216ENST00000536548 FBXL16Q8N461 479 aa8.91□□□□□ -0.98
CPSF7-216ENST00000536548 DPF2Q92785 391 aa8.91□□□□□ -0.98
CPSF7-216ENST00000536548 TUBB2BQ9BVA1 445 aa8.91□□□□□ -0.98
CPSF7-216ENST00000536548 TMEM106CQ9BVX2 250 aa8.91□□□□□ -0.98
CPSF7-216ENST00000536548 UBXN6Q9BZV1 441 aa8.91□□□□□ -0.98
CPSF7-216ENST00000536548 BICC1Q9H694 974 aaKnown RBP8.91□□□□□ -0.98
CPSF7-216ENST00000536548 ARFGAP3Q9NP61 516 aa8.91□□□□□ -0.98
CPSF7-216ENST00000536548 COPRSQ9NQ92 184 aa8.91□□□□□ -0.98
CPSF7-216ENST00000536548 PCDHA7Q9UN72 937 aa8.91□□□□□ -0.98
CPSF7-216ENST00000536548 TAF1P21675 1872 aa8.91□□□□□ -0.98
CPSF7-216ENST00000536548 NUP98P52948 1817 aa8.91□□□□□ -0.98
CPSF7-216ENST00000536548 SPTLC2O15270 562 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 IVLP07476 585 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 CYP21A2P08686 494 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 TOP1P11387 765 aaKnown RBP8.9□□□□□ -0.98
CPSF7-216ENST00000536548 CMA1P23946 247 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 GPTP24298 496 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 EXOSC10Q01780 885 aaKnown RBP8.9□□□□□ -0.98
CPSF7-216ENST00000536548 MYL5Q02045 173 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 BRD3Q15059 726 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 KIF4BQ2VIQ3 1234 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 ANGEL2Q5VTE6 544 aaKnown RBP8.9□□□□□ -0.98
CPSF7-216ENST00000536548 SYNE3Q6ZMZ3 975 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 MSL3Q8N5Y2 521 aaKnown RBP8.9□□□□□ -0.98
CPSF7-216ENST00000536548 GOLGA6L1Q8N7Z2 621 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 LINC00301Q8NCQ3 95 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 SUPT20HQ8NEM7 779 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 GOLGA5Q8TBA6 731 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 CD99L2Q8TCZ2 262 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 RABGGTAQ92696 567 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 DPF3Q92784 378 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 GOLGA1Q92805 767 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 EXOC4Q96A65 974 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 HAUS7Q99871 368 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 CFHR5Q9BXR6 569 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 TMX4Q9H1E5 349 aaPredicted RBP8.9□□□□□ -0.98
CPSF7-216ENST00000536548 DBNDD1Q9H9R9 158 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 EFCC1Q9HA90 598 aa8.9□□□□□ -0.98
CPSF7-216ENST00000536548 TLR7Q9NYK1 1049 aaKnown RBP8.9□□□□□ -0.98
CPSF7-216ENST00000536548 HOOK1Q9UJC3 728 aaKnown RBP8.9□□□□□ -0.98
CPSF7-216ENST00000536548 ZNF609O15014 1411 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 EIF3JO75822 258 aaKnown RBP8.89□□□□□ -0.99
CPSF7-216ENST00000536548 CTDNEP1O95476 244 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 SERPINC1P01008 464 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 TUBBP07437 444 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 OAS2P29728 719 aaKnown RBP8.89□□□□□ -0.99
CPSF7-216ENST00000536548 UBASH3AP57075 661 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 PDE4CQ08493 712 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 APOBRQ0VD83 1088 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 DPCR1Q3MIW9 517 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 TNNI3KQ59H18 835 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 GORABQ5T7V8 394 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 CC2D1AQ6P1N0 951 aaPredicted RBP8.89□□□□□ -0.99
CPSF7-216ENST00000536548 VSTM4Q8IW00 320 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 IQUBQ8NA54 791 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 KBTBD3Q8NAB2 608 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 ZNF333Q96JL9 665 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 C8orf76Q96K31 380 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 CARD6Q9BX69 1037 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 NYXQ9GZU5 481 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 RASSF4Q9H2L5 321 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 TMX1Q9H3N1 280 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 FEZ2Q9UHY8 353 aaPredicted RBP8.89□□□□□ -0.99
CPSF7-216ENST00000536548 DACH1Q9UI36 760 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 NAP1L2Q9ULW6 460 aaPredicted RBP8.89□□□□□ -0.99
CPSF7-216ENST00000536548 TAF6LQ9Y6J9 622 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 FPGT-TNNI3KV9GXZ4 949 aa8.89□□□□□ -0.99
CPSF7-216ENST00000536548 MYH15Q9Y2K3 1946 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 UBN2Q6ZU65 1347 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 DUOX1Q9NRD9 1551 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 A0A1B0GVL5 298 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 CCDC151A5D8V7 595 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 POLR3GO15318 223 aaPredicted RBP8.88□□□□□ -0.99
CPSF7-216ENST00000536548 ERLIN1O75477 346 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 ZNF202O95125 648 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 PDIA3P30101 505 aaKnown RBP8.88□□□□□ -0.99
CPSF7-216ENST00000536548 TNNT3P45378 269 aaPredicted RBP8.88□□□□□ -0.99
CPSF7-216ENST00000536548 NDUFA8P51970 172 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 FKBP1BP68106 108 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 PPP2R3AQ06190 1150 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 RAD51AP2Q09MP3 1159 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 SCARF1Q14162 830 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 SMC1AQ14683 1233 aaKnown RBP8.88□□□□□ -0.99
CPSF7-216ENST00000536548 NCAPHQ15003 741 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 CWF19L2Q2TBE0 894 aaKnown RBP8.88□□□□□ -0.99
CPSF7-216ENST00000536548 SLC4A8Q2Y0W8 1093 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 CFAP100Q494V2 611 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 SUSD4Q5VX71 490 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 TRIM65Q6PJ69 517 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 LEKR1Q6ZMV7 388 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 Q7L0L9 218 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 RIC3Q7Z5B4 369 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 REXO1L1PQ8IX06 675 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 ELOA2Q8IYF1 753 aaPredicted RBP8.88□□□□□ -0.99
CPSF7-216ENST00000536548 GBP3Q9H0R5 595 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 SIL1Q9H173 461 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms