RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 STK32BQ9NY57 414 aa6.21□□□□□ -1.42
YBX3-205ENST00000536107 EEA1Q15075 1411 aa6.21□□□□□ -1.42
YBX3-205ENST00000536107 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.2□□□□□ -1.42
YBX3-205ENST00000536107 DYNC1LI2O43237 492 aaPredicted RBP6.2□□□□□ -1.42
YBX3-205ENST00000536107 ECM1Q16610 540 aa6.2□□□□□ -1.42
YBX3-205ENST00000536107 KRT28Q7Z3Y7 464 aa6.2□□□□□ -1.42
YBX3-205ENST00000536107 ZKSCAN3Q9BRR0 538 aa6.2□□□□□ -1.42
YBX3-205ENST00000536107 BHLHE41Q9C0J9 482 aaPredicted RBP6.2□□□□□ -1.42
YBX3-205ENST00000536107 JAG2Q9Y219 1238 aa6.2□□□□□ -1.42
YBX3-205ENST00000536107 SPATA31A5Q5VU36 1347 aa6.2□□□□□ -1.42
YBX3-205ENST00000536107 SPATA31A3Q5VYP0 1347 aa6.2□□□□□ -1.42
YBX3-205ENST00000536107 SPATA31A7Q8IWB4 1347 aa6.2□□□□□ -1.42
YBX3-205ENST00000536107 PRMT3O60678 531 aa6.19□□□□□ -1.42
YBX3-205ENST00000536107 ASPAP45381 313 aa6.19□□□□□ -1.42
YBX3-205ENST00000536107 KCNMB1Q16558 191 aa6.19□□□□□ -1.42
YBX3-205ENST00000536107 SLC23A3Q6PIS1 610 aa6.19□□□□□ -1.42
YBX3-205ENST00000536107 AMIGO3Q86WK7 504 aa6.19□□□□□ -1.42
YBX3-205ENST00000536107 CHRDQ9H2X0 955 aa6.19□□□□□ -1.42
YBX3-205ENST00000536107 MKNK2Q9HBH9 465 aa6.19□□□□□ -1.42
YBX3-205ENST00000536107 CRIM1Q9NZV1 1036 aa6.19□□□□□ -1.42
YBX3-205ENST00000536107 USP35Q9P2H5 1018 aa6.19□□□□□ -1.42
YBX3-205ENST00000536107 ADGRL2O95490 1459 aa6.19□□□□□ -1.42
YBX3-205ENST00000536107 ACIN1Q9UKV3 1341 aaKnown RBP6.19□□□□□ -1.42
YBX3-205ENST00000536107 CHD4Q14839 1912 aa6.19□□□□□ -1.42
YBX3-205ENST00000536107 METP08581 1390 aa6.18□□□□□ -1.42
YBX3-205ENST00000536107 KIF15Q9NS87 1388 aa6.18□□□□□ -1.42
YBX3-205ENST00000536107 EIF2AK4Q9P2K8 1649 aaKnown RBP6.18□□□□□ -1.42
YBX3-205ENST00000536107 MYOM1P52179 1685 aa6.18□□□□□ -1.42
YBX3-205ENST00000536107 PXDNQ92626 1479 aa6.18□□□□□ -1.42
YBX3-205ENST00000536107 CD96P40200 585 aa6.18□□□□□ -1.42
YBX3-205ENST00000536107 HTRA3P83110 453 aa6.18□□□□□ -1.42
YBX3-205ENST00000536107 NAA30Q147X3 362 aaPredicted RBP6.18□□□□□ -1.42
YBX3-205ENST00000536107 IFI16Q16666 785 aaKnown RBP6.18□□□□□ -1.42
YBX3-205ENST00000536107 ZNF326Q5BKZ1 582 aaKnown RBP6.18□□□□□ -1.42
YBX3-205ENST00000536107 CAPN12Q6ZSI9 719 aa6.18□□□□□ -1.42
YBX3-205ENST00000536107 ZFYVE1Q9HBF4 777 aa6.18□□□□□ -1.42
YBX3-205ENST00000536107 DAGLAQ9Y4D2 1042 aa6.18□□□□□ -1.42
YBX3-205ENST00000536107 SHANK3Q9BYB0 1731 aa6.18□□□□□ -1.42
YBX3-205ENST00000536107 DUOX2Q9NRD8 1548 aa6.17□□□□□ -1.42
YBX3-205ENST00000536107 CYP11A1P05108 521 aa6.17□□□□□ -1.42
YBX3-205ENST00000536107 POLD1P28340 1107 aa6.17□□□□□ -1.42
YBX3-205ENST00000536107 AOC3Q16853 763 aa6.17□□□□□ -1.42
YBX3-205ENST00000536107 AKAP4Q5JQC9 854 aa6.17□□□□□ -1.42
YBX3-205ENST00000536107 ANGEL2Q5VTE6 544 aaKnown RBP6.17□□□□□ -1.42
YBX3-205ENST00000536107 SYDE1Q6ZW31 735 aaPredicted RBP6.17□□□□□ -1.42
YBX3-205ENST00000536107 JMYQ8N9B5 988 aa6.17□□□□□ -1.42
YBX3-205ENST00000536107 FAM181AQ8N9Y4 354 aa6.17□□□□□ -1.42
YBX3-205ENST00000536107 ASAP3Q8TDY4 903 aa6.17□□□□□ -1.42
YBX3-205ENST00000536107 AP4E1Q9UPM8 1137 aa6.17□□□□□ -1.42
YBX3-205ENST00000536107 TNS1Q9HBL0 1735 aaKnown RBP6.16□□□□□ -1.42
YBX3-205ENST00000536107 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.16□□□□□ -1.42
YBX3-205ENST00000536107 CTSBP07858 339 aa6.16□□□□□ -1.42
YBX3-205ENST00000536107 HSPA1AP0DMV8 641 aaKnown RBP6.16□□□□□ -1.42
YBX3-205ENST00000536107 HSPA1BP0DMV9 641 aaKnown RBP6.16□□□□□ -1.42
YBX3-205ENST00000536107 EDN3P14138 238 aa6.16□□□□□ -1.42
YBX3-205ENST00000536107 MAOBP27338 520 aa6.16□□□□□ -1.42
YBX3-205ENST00000536107 SLC15A2Q16348 729 aa6.16□□□□□ -1.42
YBX3-205ENST00000536107 HRASLS5Q96KN8 279 aa6.16□□□□□ -1.42
YBX3-205ENST00000536107 CALR3Q96L12 384 aaKnown RBP6.16□□□□□ -1.42
YBX3-205ENST00000536107 MKNK1Q9BUB5 465 aa6.16□□□□□ -1.42
YBX3-205ENST00000536107 RAD18Q9NS91 495 aa6.16□□□□□ -1.42
YBX3-205ENST00000536107 NOVA2Q9UNW9 492 aaKnown RBP6.16□□□□□ -1.42
YBX3-205ENST00000536107 TMEM131LA2VDJ0 1609 aa6.16□□□□□ -1.42
YBX3-205ENST00000536107 USP32Q8NFA0 1604 aa6.16□□□□□ -1.42
YBX3-205ENST00000536107 MAP3K5Q99683 1374 aa6.16□□□□□ -1.42
YBX3-205ENST00000536107 MARF1Q9Y4F3 1742 aaKnown RBP6.16□□□□□ -1.42
YBX3-205ENST00000536107 LAMC1P11047 1609 aa6.15□□□□□ -1.42
YBX3-205ENST00000536107 PLSCR1O15162 318 aa6.15□□□□□ -1.42
YBX3-205ENST00000536107 TOMM70O94826 608 aa6.15□□□□□ -1.42
YBX3-205ENST00000536107 KRT1P04264 644 aa6.15□□□□□ -1.42
YBX3-205ENST00000536107 CTSWP56202 376 aa6.15□□□□□ -1.42
YBX3-205ENST00000536107 EVA1CP58658 441 aa6.15□□□□□ -1.42
YBX3-205ENST00000536107 POU4F3Q15319 338 aa6.15□□□□□ -1.42
YBX3-205ENST00000536107 NLGN2Q8NFZ4 835 aa6.15□□□□□ -1.42
YBX3-205ENST00000536107 LIN37Q96GY3 246 aaPredicted RBP6.15□□□□□ -1.42
YBX3-205ENST00000536107 CXXC1Q9P0U4 656 aaPredicted RBP6.15□□□□□ -1.42
YBX3-205ENST00000536107 NUP188Q5SRE5 1749 aa6.15□□□□□ -1.42
YBX3-205ENST00000536107 ABCC5O15440 1437 aa6.15□□□□□ -1.43
YBX3-205ENST00000536107 ERBINQ96RT1 1412 aa6.15□□□□□ -1.43
YBX3-205ENST00000536107 ARHGEF5Q12774 1597 aa6.14□□□□□ -1.43
YBX3-205ENST00000536107 PTPN23Q9H3S7 1636 aa6.14□□□□□ -1.43
YBX3-205ENST00000536107 TMEM265A0A087WTH1 108 aa6.14□□□□□ -1.43
YBX3-205ENST00000536107 INHBBP09529 407 aa6.14□□□□□ -1.43
YBX3-205ENST00000536107 FAM87AP0C7U9 286 aa6.14□□□□□ -1.43
YBX3-205ENST00000536107 C1QTNF9P0C862 333 aa6.14□□□□□ -1.43
YBX3-205ENST00000536107 C16orf71Q8IYS4 520 aaPredicted RBP6.14□□□□□ -1.43
YBX3-205ENST00000536107 LGR6Q9HBX8 967 aa6.14□□□□□ -1.43
YBX3-205ENST00000536107 U3KQE9 123 aa6.14□□□□□ -1.43
YBX3-205ENST00000536107 SPATA31A1Q5TZJ5 1347 aa6.14□□□□□ -1.43
YBX3-205ENST00000536107 SYNGAP1Q96PV0 1343 aa6.14□□□□□ -1.43
YBX3-205ENST00000536107 CCDC144AA2RUR9 1427 aa6.14□□□□□ -1.43
YBX3-205ENST00000536107 CEP162Q5TB80 1403 aa6.14□□□□□ -1.43
YBX3-205ENST00000536107 GOLGB1Q14789 3259 aaKnown RBP6.13□□□□□ -1.43
YBX3-205ENST00000536107 PCSK2P16519 638 aa6.13□□□□□ -1.43
YBX3-205ENST00000536107 RFX1P22670 979 aa6.13□□□□□ -1.43
YBX3-205ENST00000536107 ATCAYQ86WG3 371 aa6.13□□□□□ -1.43
YBX3-205ENST00000536107 GGNBP2Q9H3C7 697 aa6.13□□□□□ -1.43
YBX3-205ENST00000536107 PRDM11Q9NQV5 511 aa6.13□□□□□ -1.43
YBX3-205ENST00000536107 ROBO2Q9HCK4 1378 aa6.13□□□□□ -1.43
YBX3-205ENST00000536107 RREB1Q92766 1687 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms