RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 NAPBQ9H115 298 aa17.2■□□□□ 0.34
MSRB3-206ENST00000535664 CABP5Q9NP86 173 aa17.2■□□□□ 0.34
MSRB3-206ENST00000535664 CASP8AP2Q9UKL3 1982 aa17.2■□□□□ 0.34
MSRB3-206ENST00000535664 TRIM75PA6NK02 468 aa17.19■□□□□ 0.34
MSRB3-206ENST00000535664 FAM196BA6NMK8 535 aa17.19■□□□□ 0.34
MSRB3-206ENST00000535664 ZKSCAN1P17029 563 aaPredicted RBP17.19■□□□□ 0.34
MSRB3-206ENST00000535664 TDO2P48775 406 aa17.19■□□□□ 0.34
MSRB3-206ENST00000535664 SPP2Q13103 211 aa17.19■□□□□ 0.34
MSRB3-206ENST00000535664 COL9A3Q14050 684 aaPredicted RBP17.19■□□□□ 0.34
MSRB3-206ENST00000535664 RABEP1Q15276 862 aa17.19■□□□□ 0.34
MSRB3-206ENST00000535664 IMMTQ16891 758 aaKnown RBP17.19■□□□□ 0.34
MSRB3-206ENST00000535664 CERKLQ49MI3 558 aaPredicted RBP17.19■□□□□ 0.34
MSRB3-206ENST00000535664 SBK1Q52WX2 424 aa17.19■□□□□ 0.34
MSRB3-206ENST00000535664 SH3D19Q5HYK7 790 aa17.19■□□□□ 0.34
MSRB3-206ENST00000535664 FBXO46Q6PJ61 603 aaPredicted RBP17.19■□□□□ 0.34
MSRB3-206ENST00000535664 TBC1D10CQ8IV04 446 aa17.19■□□□□ 0.34
MSRB3-206ENST00000535664 TM6SF1Q9BZW5 370 aa17.19■□□□□ 0.34
MSRB3-206ENST00000535664 R3HDMLQ9H3Y0 253 aa17.19■□□□□ 0.34
MSRB3-206ENST00000535664 AGTPBP1Q9UPW5 1226 aa17.19■□□□□ 0.34
MSRB3-206ENST00000535664 TACC3Q9Y6A5 838 aa17.19■□□□□ 0.34
MSRB3-206ENST00000535664 HAND2P61296 217 aa17.18■□□□□ 0.34
MSRB3-206ENST00000535664 MOGSQ13724 837 aa17.18■□□□□ 0.34
MSRB3-206ENST00000535664 CTR9Q6PD62 1173 aa17.18■□□□□ 0.34
MSRB3-206ENST00000535664 TMOD4Q9NZQ9 345 aa17.18■□□□□ 0.34
MSRB3-206ENST00000535664 ANAPC4Q9UJX5 808 aa17.18■□□□□ 0.34
MSRB3-206ENST00000535664 DOCK1Q14185 1865 aa17.18■□□□□ 0.34
MSRB3-206ENST00000535664 ROBO3Q96MS0 1386 aa17.17■□□□□ 0.34
MSRB3-206ENST00000535664 E7EWF7 191 aa17.17■□□□□ 0.34
MSRB3-206ENST00000535664 SMIM22K7EJ46 135 aa17.17■□□□□ 0.34
MSRB3-206ENST00000535664 ZNF213O14771 459 aa17.17■□□□□ 0.34
MSRB3-206ENST00000535664 PRMT2P55345 433 aa17.17■□□□□ 0.34
MSRB3-206ENST00000535664 EVX2Q03828 476 aa17.17■□□□□ 0.34
MSRB3-206ENST00000535664 PPARAQ07869 468 aa17.17■□□□□ 0.34
MSRB3-206ENST00000535664 ABCB5Q2M3G0 1257 aa17.17■□□□□ 0.34
MSRB3-206ENST00000535664 GPAT2Q6NUI2 795 aa17.17■□□□□ 0.34
MSRB3-206ENST00000535664 GADL1Q6ZQY3 521 aa17.17■□□□□ 0.34
MSRB3-206ENST00000535664 CCDC17Q96LX7 622 aa17.17■□□□□ 0.34
MSRB3-206ENST00000535664 DNAJC18Q9H819 358 aa17.17■□□□□ 0.34
MSRB3-206ENST00000535664 EFCC1Q9HA90 598 aa17.17■□□□□ 0.34
MSRB3-206ENST00000535664 ZSWIM6Q9HCJ5 1215 aa17.17■□□□□ 0.34
MSRB3-206ENST00000535664 ARPP21Q9UBL0 812 aaPredicted RBP17.17■□□□□ 0.34
MSRB3-206ENST00000535664 ZBTB21Q9ULJ3 1066 aa17.17■□□□□ 0.34
MSRB3-206ENST00000535664 CYP2D7A0A087X1C5 515 aa17.16■□□□□ 0.34
MSRB3-206ENST00000535664 USP17L10C9JJH3 530 aa17.16■□□□□ 0.34
MSRB3-206ENST00000535664 USP17L12C9JPN9 530 aa17.16■□□□□ 0.34
MSRB3-206ENST00000535664 USP17L21D6R901 530 aa17.16■□□□□ 0.34
MSRB3-206ENST00000535664 CYP2D6P10635 497 aa17.16■□□□□ 0.34
MSRB3-206ENST00000535664 OSBPP22059 807 aa17.16■□□□□ 0.34
MSRB3-206ENST00000535664 HOXD10P28358 340 aa17.16■□□□□ 0.34
MSRB3-206ENST00000535664 PLCD1P51178 756 aa17.16■□□□□ 0.34
MSRB3-206ENST00000535664 USP14P54578 494 aa17.16■□□□□ 0.34
MSRB3-206ENST00000535664 BACE1P56817 501 aa17.16■□□□□ 0.34
MSRB3-206ENST00000535664 GABPAQ06546 454 aa17.16■□□□□ 0.34
MSRB3-206ENST00000535664 KRT32Q14532 448 aa17.16■□□□□ 0.34
MSRB3-206ENST00000535664 C17orf99Q6UX52 265 aa17.16■□□□□ 0.34
MSRB3-206ENST00000535664 JAKMIP1Q96N16 626 aaKnown RBP17.16■□□□□ 0.34
MSRB3-206ENST00000535664 ZNF287Q9HBT7 754 aa17.16■□□□□ 0.34
MSRB3-206ENST00000535664 TRIM17Q9Y577 477 aa17.16■□□□□ 0.34
MSRB3-206ENST00000535664 SIPA1L1O43166 1804 aa17.15■□□□□ 0.34
MSRB3-206ENST00000535664 SLURP2P0DP57 97 aa17.15■□□□□ 0.34
MSRB3-206ENST00000535664 GCLCP48506 637 aaPredicted RBP17.15■□□□□ 0.34
MSRB3-206ENST00000535664 C12orf60Q5U649 245 aa17.15■□□□□ 0.34
MSRB3-206ENST00000535664 SMCR8Q8TEV9 937 aaPredicted RBP17.15■□□□□ 0.34
MSRB3-206ENST00000535664 MYH1P12882 1939 aa17.15■□□□□ 0.34
MSRB3-206ENST00000535664 CCDC85CA6NKD9 419 aa17.14■□□□□ 0.33
MSRB3-206ENST00000535664 CD2BP2O95400 341 aaKnown RBP17.14■□□□□ 0.33
MSRB3-206ENST00000535664 GH2P01242 217 aa17.14■□□□□ 0.33
MSRB3-206ENST00000535664 FGRP09769 529 aa17.14■□□□□ 0.33
MSRB3-206ENST00000535664 CASTP20810 708 aaKnown RBP17.14■□□□□ 0.33
MSRB3-206ENST00000535664 ANP32AP39687 249 aaKnown RBP17.14■□□□□ 0.33
MSRB3-206ENST00000535664 LACTBP83111 547 aaPredicted RBP17.14■□□□□ 0.33
MSRB3-206ENST00000535664 CTDSPL2Q05D32 466 aa17.14■□□□□ 0.33
MSRB3-206ENST00000535664 RRP1BQ14684 758 aaKnown RBP17.14■□□□□ 0.33
MSRB3-206ENST00000535664 USP17L2Q6R6M4 530 aa17.14■□□□□ 0.33
MSRB3-206ENST00000535664 OTOP1Q7RTM1 612 aa17.14■□□□□ 0.33
MSRB3-206ENST00000535664 NKX2-3Q8TAU0 364 aa17.14■□□□□ 0.33
MSRB3-206ENST00000535664 STAG1Q8WVM7 1258 aa17.14■□□□□ 0.33
MSRB3-206ENST00000535664 TTC14Q96N46 770 aa17.14■□□□□ 0.33
MSRB3-206ENST00000535664 UPF3BQ9BZI7 483 aaKnown RBP17.14■□□□□ 0.33
MSRB3-206ENST00000535664 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.14■□□□□ 0.33
MSRB3-206ENST00000535664 NEDD4P46934 1319 aa17.14■□□□□ 0.33
MSRB3-206ENST00000535664 GDF11O95390 407 aa17.13■□□□□ 0.33
MSRB3-206ENST00000535664 CPA1P15085 419 aa17.13■□□□□ 0.33
MSRB3-206ENST00000535664 PSMA5P28066 241 aa17.13■□□□□ 0.33
MSRB3-206ENST00000535664 HOXA7P31268 230 aaPredicted RBP17.13■□□□□ 0.33
MSRB3-206ENST00000535664 SHMT1P34896 483 aa17.13■□□□□ 0.33
MSRB3-206ENST00000535664 HMGCS2P54868 508 aa17.13■□□□□ 0.33
MSRB3-206ENST00000535664 AKNAD1Q5T1N1 836 aa17.13■□□□□ 0.33
MSRB3-206ENST00000535664 TMEM179Q6ZVK1 233 aa17.13■□□□□ 0.33
MSRB3-206ENST00000535664 MB21D2Q8IYB1 491 aaPredicted RBP17.13■□□□□ 0.33
MSRB3-206ENST00000535664 CD99L2Q8TCZ2 262 aa17.13■□□□□ 0.33
MSRB3-206ENST00000535664 GTF3C2Q8WUA4 911 aaPredicted RBP17.13■□□□□ 0.33
MSRB3-206ENST00000535664 SNX21Q969T3 373 aa17.13■□□□□ 0.33
MSRB3-206ENST00000535664 NEK1Q96PY6 1258 aa17.13■□□□□ 0.33
MSRB3-206ENST00000535664 MINDY4BA8MYZ0 360 aa17.12■□□□□ 0.33
MSRB3-206ENST00000535664 CAPN15O75808 1086 aa17.12■□□□□ 0.33
MSRB3-206ENST00000535664 RPS6KB1P23443 525 aa17.12■□□□□ 0.33
MSRB3-206ENST00000535664 MTMR2Q13614 643 aa17.12■□□□□ 0.33
MSRB3-206ENST00000535664 RAB3GAP1Q15042 981 aa17.12■□□□□ 0.33
MSRB3-206ENST00000535664 SLC4A8Q2Y0W8 1093 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms