RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 TBC1D10BQ4KMP7 808 aaPredicted RBP14.03□□□□□ -0.16
SPG11-203ENST00000535302 IFT74Q96LB3 600 aa14.03□□□□□ -0.16
SPG11-203ENST00000535302 RILPQ96NA2 401 aa14.03□□□□□ -0.16
SPG11-203ENST00000535302 GIPC1O14908 333 aa14.03□□□□□ -0.16
SPG11-203ENST00000535302 TPH2Q8IWU9 490 aa14.03□□□□□ -0.16
SPG11-203ENST00000535302 NUF2Q9BZD4 464 aa14.03□□□□□ -0.16
SPG11-203ENST00000535302 SH2D4AQ9H788 454 aa14.03□□□□□ -0.16
SPG11-203ENST00000535302 ABCF3Q9NUQ8 709 aa14.03□□□□□ -0.16
SPG11-203ENST00000535302 MTUS1Q9ULD2 1270 aa14.03□□□□□ -0.16
SPG11-203ENST00000535302 LACTBP83111 547 aaPredicted RBP14.03□□□□□ -0.16
SPG11-203ENST00000535302 SDR42E1Q8WUS8 393 aa14.03□□□□□ -0.16
SPG11-203ENST00000535302 LRWD1Q9UFC0 647 aa14.03□□□□□ -0.16
SPG11-203ENST00000535302 GYG1P46976 350 aa14.02□□□□□ -0.16
SPG11-203ENST00000535302 VAV2P52735 878 aa14.02□□□□□ -0.16
SPG11-203ENST00000535302 CALCRLQ16602 461 aa14.02□□□□□ -0.16
SPG11-203ENST00000535302 HERC4Q5GLZ8 1057 aaPredicted RBP14.02□□□□□ -0.16
SPG11-203ENST00000535302 NUP153P49790 1475 aaKnown RBP14.02□□□□□ -0.16
SPG11-203ENST00000535302 EVCP57679 992 aa14.02□□□□□ -0.16
SPG11-203ENST00000535302 FANCCQ00597 558 aa14.02□□□□□ -0.16
SPG11-203ENST00000535302 CNNM4Q6P4Q7 775 aa14.02□□□□□ -0.16
SPG11-203ENST00000535302 MRPL44Q9H9J2 332 aaKnown RBP14.02□□□□□ -0.16
SPG11-203ENST00000535302 ANKRD42Q8N9B4 389 aa14.02□□□□□ -0.16
SPG11-203ENST00000535302 ZNF496Q96IT1 587 aaPredicted RBP14.02□□□□□ -0.16
SPG11-203ENST00000535302 UTP11Q9Y3A2 253 aaKnown RBP14.02□□□□□ -0.16
SPG11-203ENST00000535302 PAK1Q13153 545 aa14.02□□□□□ -0.17
SPG11-203ENST00000535302 CNGA4Q8IV77 575 aa14.02□□□□□ -0.17
SPG11-203ENST00000535302 METTL13Q8N6R0 699 aa14.02□□□□□ -0.17
SPG11-203ENST00000535302 USP21Q9UK80 565 aa14.02□□□□□ -0.17
SPG11-203ENST00000535302 ITSN2Q9NZM3 1697 aa14.02□□□□□ -0.17
SPG11-203ENST00000535302 FAM47CQ5HY64 1035 aa14.02□□□□□ -0.17
SPG11-203ENST00000535302 KIFAP3Q92845 792 aa14.02□□□□□ -0.17
SPG11-203ENST00000535302 CBX8Q9HC52 389 aa14.02□□□□□ -0.17
SPG11-203ENST00000535302 USP40Q9NVE5 1235 aa14.02□□□□□ -0.17
SPG11-203ENST00000535302 TNNC1P63316 161 aa14.02□□□□□ -0.17
SPG11-203ENST00000535302 GCKRQ14397 625 aa14.02□□□□□ -0.17
SPG11-203ENST00000535302 RILPL1Q5EBL4 403 aa14.02□□□□□ -0.17
SPG11-203ENST00000535302 SESTD1Q86VW0 696 aa14.02□□□□□ -0.17
SPG11-203ENST00000535302 KIAA1524Q8TCG1 905 aa14.02□□□□□ -0.17
SPG11-203ENST00000535302 SKA2Q8WVK7 121 aaPredicted RBP14.02□□□□□ -0.17
SPG11-203ENST00000535302 TMEM87BQ96K49 555 aa14.02□□□□□ -0.17
SPG11-203ENST00000535302 KRT40Q6A162 431 aa14.01□□□□□ -0.17
SPG11-203ENST00000535302 CHMP6Q96FZ7 201 aa14.01□□□□□ -0.17
SPG11-203ENST00000535302 ASIC3Q9UHC3 531 aa14.01□□□□□ -0.17
SPG11-203ENST00000535302 PARP10Q53GL7 1025 aa14.01□□□□□ -0.17
SPG11-203ENST00000535302 GBP6Q6ZN66 633 aa14.01□□□□□ -0.17
SPG11-203ENST00000535302 PRPF31Q8WWY3 499 aaKnown RBP14.01□□□□□ -0.17
SPG11-203ENST00000535302 MED10Q9BTT4 135 aa14.01□□□□□ -0.17
SPG11-203ENST00000535302 TSGA10Q9BZW7 698 aa14.01□□□□□ -0.17
SPG11-203ENST00000535302 IVNS1ABPQ9Y6Y0 642 aa14.01□□□□□ -0.17
SPG11-203ENST00000535302 UHRF1BP1Q6BDS2 1440 aa14.01□□□□□ -0.17
SPG11-203ENST00000535302 NELFBQ8WX92 580 aa14.01□□□□□ -0.17
SPG11-203ENST00000535302 LPIN2Q92539 896 aa14.01□□□□□ -0.17
SPG11-203ENST00000535302 ZFYVE9O95405 1425 aa14.01□□□□□ -0.17
SPG11-203ENST00000535302 TEX14Q8IWB6 1497 aa14.01□□□□□ -0.17
SPG11-203ENST00000535302 ZNF202O95125 648 aa14.01□□□□□ -0.17
SPG11-203ENST00000535302 CABP7Q86V35 215 aa14.01□□□□□ -0.17
SPG11-203ENST00000535302 METTL14Q9HCE5 456 aaKnown RBP14.01□□□□□ -0.17
SPG11-203ENST00000535302 PPIP5K2O43314 1243 aa14.01□□□□□ -0.17
SPG11-203ENST00000535302 ALDH3A1P30838 453 aa14.01□□□□□ -0.17
SPG11-203ENST00000535302 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.01□□□□□ -0.17
SPG11-203ENST00000535302 VGLL3A8MV65 326 aa14□□□□□ -0.17
SPG11-203ENST00000535302 CASP2P42575 452 aa14□□□□□ -0.17
SPG11-203ENST00000535302 FAM182BQ5T319 152 aa14□□□□□ -0.17
SPG11-203ENST00000535302 LRRC47Q8N1G4 583 aaKnown RBP14□□□□□ -0.17
SPG11-203ENST00000535302 BCS1LQ9Y276 419 aa14□□□□□ -0.17
SPG11-203ENST00000535302 E7EWF7 191 aa14□□□□□ -0.17
SPG11-203ENST00000535302 SLC4A1P02730 911 aa14□□□□□ -0.17
SPG11-203ENST00000535302 VPS41P49754 854 aa14□□□□□ -0.17
SPG11-203ENST00000535302 BCAMP50895 628 aa14□□□□□ -0.17
SPG11-203ENST00000535302 TMTC4Q5T4D3 741 aa14□□□□□ -0.17
SPG11-203ENST00000535302 TRIM68Q6AZZ1 485 aa14□□□□□ -0.17
SPG11-203ENST00000535302 SCYL2Q6P3W7 929 aa14□□□□□ -0.17
SPG11-203ENST00000535302 UHMK1Q8TAS1 419 aaKnown RBP14□□□□□ -0.17
SPG11-203ENST00000535302 ZBED4O75132 1171 aa14□□□□□ -0.17
SPG11-203ENST00000535302 MTX1Q13505 466 aa14□□□□□ -0.17
SPG11-203ENST00000535302 KCNQ4P56696 695 aa14□□□□□ -0.17
SPG11-203ENST00000535302 NONOQ15233 471 aaKnown RBP eCLIP14□□□□□ -0.17
SPG11-203ENST00000535302 ST7Q9NRC1 585 aa14□□□□□ -0.17
SPG11-203ENST00000535302 CTTNBP2NLQ9P2B4 639 aa14□□□□□ -0.17
SPG11-203ENST00000535302 CNGA1P29973 690 aa14□□□□□ -0.17
SPG11-203ENST00000535302 HAUS3Q68CZ6 603 aa14□□□□□ -0.17
SPG11-203ENST00000535302 EIF4G3O43432 1585 aaKnown RBP14□□□□□ -0.17
SPG11-203ENST00000535302 INTS4Q96HW7 963 aaKnown RBP14□□□□□ -0.17
SPG11-203ENST00000535302 TESPA1A2RU30 521 aaPredicted RBP13.99□□□□□ -0.17
SPG11-203ENST00000535302 EXOC3O60645 756 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 GPKOWQ92917 476 aaPredicted RBP eCLIP13.99□□□□□ -0.17
SPG11-203ENST00000535302 TTF2Q9UNY4 1162 aaKnown RBP13.99□□□□□ -0.17
SPG11-203ENST00000535302 CD19P15391 556 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 SLC8A3P57103 927 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 FYB2Q5VWT5 728 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 TTLL7Q6ZT98 887 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 RSRC1Q96IZ7 334 aaKnown RBP13.99□□□□□ -0.17
SPG11-203ENST00000535302 PPARAQ07869 468 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 FAM102BQ5T8I3 360 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 CYP26C1Q6V0L0 522 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 ZNF365Q70YC5 407 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 PPFIBP2Q8ND30 876 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 MCUR1Q96AQ8 359 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 NLRC4Q9NPP4 1024 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 FAM207AQ9NSI2 230 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms