RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 ENTPD3O75355 529 aa27.6■■■□□ 2.01
PTPMT1-205ENST00000534775 UBE2HP62256 183 aa27.6■■■□□ 2.01
PTPMT1-205ENST00000534775 CIAPIN1Q6FI81 312 aa27.6■■■□□ 2.01
PTPMT1-205ENST00000534775 FAM173BQ6P4H8 233 aa27.6■■■□□ 2.01
PTPMT1-205ENST00000534775 BRAPQ7Z569 592 aa27.6■■■□□ 2.01
PTPMT1-205ENST00000534775 GPT2Q8TD30 523 aa27.6■■■□□ 2.01
PTPMT1-205ENST00000534775 ZNF396Q96N95 335 aaPredicted RBP27.6■■■□□ 2.01
PTPMT1-205ENST00000534775 TDRD3Q9H7E2 651 aaKnown RBP27.6■■■□□ 2.01
PTPMT1-205ENST00000534775 FAM198AQ9UFP1 575 aa27.6■■■□□ 2.01
PTPMT1-205ENST00000534775 TNIP1Q15025 636 aa27.59■■■□□ 2.01
PTPMT1-205ENST00000534775 DLGAP5Q15398 846 aa27.59■■■□□ 2.01
PTPMT1-205ENST00000534775 TMTC3Q6ZXV5 915 aa27.59■■■□□ 2.01
PTPMT1-205ENST00000534775 PRMT6Q96LA8 375 aaPredicted RBP27.59■■■□□ 2.01
PTPMT1-205ENST00000534775 STX8Q9UNK0 236 aa27.59■■■□□ 2.01
PTPMT1-205ENST00000534775 MMP14P50281 582 aa27.59■■■□□ 2.01
PTPMT1-205ENST00000534775 CACNB3P54284 484 aa27.59■■■□□ 2.01
PTPMT1-205ENST00000534775 CXCL9Q07325 125 aa27.59■■■□□ 2.01
PTPMT1-205ENST00000534775 KRT40Q6A162 431 aa27.59■■■□□ 2.01
PTPMT1-205ENST00000534775 OTUD7BQ6GQQ9 843 aa27.59■■■□□ 2.01
PTPMT1-205ENST00000534775 PI4KBQ9UBF8 816 aa27.59■■■□□ 2.01
PTPMT1-205ENST00000534775 SPDYE2BA6NHP3 402 aa27.58■■■□□ 2.01
PTPMT1-205ENST00000534775 PRPF3O43395 683 aaKnown RBP27.58■■■□□ 2.01
PTPMT1-205ENST00000534775 SPDYE6P0CI01 402 aa27.58■■■□□ 2.01
PTPMT1-205ENST00000534775 TCP10Q12799 353 aa27.58■■■□□ 2.01
PTPMT1-205ENST00000534775 SPATA32Q96LK8 384 aa27.58■■■□□ 2.01
PTPMT1-205ENST00000534775 AIFM3Q96NN9 605 aa27.58■■■□□ 2.01
PTPMT1-205ENST00000534775 TMEM47Q9BQJ4 181 aa27.58■■■□□ 2.01
PTPMT1-205ENST00000534775 GOLGB1Q14789 3259 aaKnown RBP27.58■■■□□ 2.01
PTPMT1-205ENST00000534775 GNAQP50148 359 aa27.57■■■□□ 2
PTPMT1-205ENST00000534775 FUT2Q10981 343 aa27.57■■■□□ 2
PTPMT1-205ENST00000534775 ZSCAN29Q8IWY8 852 aaPredicted RBP27.57■■■□□ 2
PTPMT1-205ENST00000534775 CCDC82Q8N4S0 544 aa27.57■■■□□ 2
PTPMT1-205ENST00000534775 ZBTB12Q9Y330 459 aaPredicted RBP27.57■■■□□ 2
PTPMT1-205ENST00000534775 ATRNL1Q5VV63 1379 aa27.57■■■□□ 2
PTPMT1-205ENST00000534775 SIPA1L1O43166 1804 aa27.57■■■□□ 2
PTPMT1-205ENST00000534775 TOP1P11387 765 aaKnown RBP27.56■■■□□ 2
PTPMT1-205ENST00000534775 XBP1P17861 261 aa27.56■■■□□ 2
PTPMT1-205ENST00000534775 NOVP48745 357 aa27.56■■■□□ 2
PTPMT1-205ENST00000534775 KIF23Q02241 960 aaPredicted RBP27.56■■■□□ 2
PTPMT1-205ENST00000534775 GRM4Q14833 912 aa27.56■■■□□ 2
PTPMT1-205ENST00000534775 PPP4R3BQ5MIZ7 849 aa27.56■■■□□ 2
PTPMT1-205ENST00000534775 ZFPM1Q8IX07 1006 aa27.56■■■□□ 2
PTPMT1-205ENST00000534775 CMTR1Q8N1G2 835 aaKnown RBP27.56■■■□□ 2
PTPMT1-205ENST00000534775 MTMR14Q8NCE2 650 aa27.56■■■□□ 2
PTPMT1-205ENST00000534775 CCDC17Q96LX7 622 aa27.56■■■□□ 2
PTPMT1-205ENST00000534775 TRIM34Q9BYJ4 488 aa27.56■■■□□ 2
PTPMT1-205ENST00000534775 GADD45BO75293 160 aaPredicted RBP27.56■■■□□ 2
PTPMT1-205ENST00000534775 PLEKHA8P1O95397 391 aa27.56■■■□□ 2
PTPMT1-205ENST00000534775 SHMT1P34896 483 aa27.56■■■□□ 2
PTPMT1-205ENST00000534775 FOXP4Q8IVH2 680 aaPredicted RBP27.56■■■□□ 2
PTPMT1-205ENST00000534775 CEP95Q96GE4 821 aa27.56■■■□□ 2
PTPMT1-205ENST00000534775 RBM27Q9P2N5 1060 aaKnown RBP27.56■■■□□ 2
PTPMT1-205ENST00000534775 TFIP11Q9UBB9 837 aaKnown RBP27.56■■■□□ 2
PTPMT1-205ENST00000534775 SAFBQ15424 915 aaKnown RBP eCLIP27.55■■■□□ 2
PTPMT1-205ENST00000534775 CAVIN1Q6NZI2 390 aaKnown RBP27.55■■■□□ 2
PTPMT1-205ENST00000534775 NLGN2Q8NFZ4 835 aa27.55■■■□□ 2
PTPMT1-205ENST00000534775 SYAP1Q96A49 352 aaPredicted RBP27.55■■■□□ 2
PTPMT1-205ENST00000534775 GJB4Q9NTQ9 266 aa27.55■■■□□ 2
PTPMT1-205ENST00000534775 GNL2Q13823 731 aaKnown RBP27.54■■■□□ 2
PTPMT1-205ENST00000534775 LEO1Q8WVC0 666 aaPredicted RBP27.54■■■□□ 2
PTPMT1-205ENST00000534775 CNTNAP5Q8WYK1 1306 aa27.54■■■□□ 2
PTPMT1-205ENST00000534775 GREB1LQ9C091 1923 aaPredicted RBP27.53■■■□□ 2
PTPMT1-205ENST00000534775 DDTLA6NHG4 134 aaPredicted RBP27.53■■■□□ 2
PTPMT1-205ENST00000534775 AKR1B1P15121 316 aa27.53■■■□□ 2
PTPMT1-205ENST00000534775 RPS12P25398 132 aaKnown RBP27.53■■■□□ 2
PTPMT1-205ENST00000534775 GUCY1A2P33402 732 aa27.53■■■□□ 2
PTPMT1-205ENST00000534775 SRBD1Q8N5C6 995 aaKnown RBP27.53■■■□□ 2
PTPMT1-205ENST00000534775 MTMR4Q9NYA4 1195 aa27.53■■■□□ 2
PTPMT1-205ENST00000534775 IGKV6D-41A0A0C4DH26 115 aa27.52■■■□□ 2
PTPMT1-205ENST00000534775 SH3BP5LQ7L8J4 393 aa27.52■■■□□ 2
PTPMT1-205ENST00000534775 LZTS2Q9BRK4 669 aa27.52■■■□□ 2
PTPMT1-205ENST00000534775 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.52■■■□□ 2
PTPMT1-205ENST00000534775 ZNF70Q9UC06 446 aaPredicted RBP27.52■■■□□ 2
PTPMT1-205ENST00000534775 V9GY48 417 aaPredicted RBP27.52■■■□□ 2
PTPMT1-205ENST00000534775 MMP1P03956 469 aa27.52■■■□□ 2
PTPMT1-205ENST00000534775 SPDYE2Q495Y8 402 aa27.52■■■□□ 2
PTPMT1-205ENST00000534775 FKBP1CQ5VVH2 108 aa27.52■■■□□ 2
PTPMT1-205ENST00000534775 UBE2Q2LH0YL09 131 aa27.51■■□□□ 1.99
PTPMT1-205ENST00000534775 MYO1BO43795 1136 aa27.51■■□□□ 1.99
PTPMT1-205ENST00000534775 METTL16Q86W50 562 aaKnown RBP27.51■■□□□ 1.99
PTPMT1-205ENST00000534775 GOLGA6L4A6NEF3 574 aa27.5■■□□□ 1.99
PTPMT1-205ENST00000534775 U2AF2P26368 475 aaKnown RBP eCLIP27.5■■□□□ 1.99
PTPMT1-205ENST00000534775 EIF6P56537 245 aaKnown RBP27.5■■□□□ 1.99
PTPMT1-205ENST00000534775 RASSF7Q02833 373 aa27.5■■□□□ 1.99
PTPMT1-205ENST00000534775 PKN1Q16512 942 aa27.5■■□□□ 1.99
PTPMT1-205ENST00000534775 MYSM1Q5VVJ2 828 aa27.5■■□□□ 1.99
PTPMT1-205ENST00000534775 MAD2L2Q9UI95 211 aa27.5■■□□□ 1.99
PTPMT1-205ENST00000534775 KIF28PB7ZC32 967 aa27.49■■□□□ 1.99
PTPMT1-205ENST00000534775 TTLL1O95922 423 aa27.49■■□□□ 1.99
PTPMT1-205ENST00000534775 FAM151AQ8WW52 585 aa27.49■■□□□ 1.99
PTPMT1-205ENST00000534775 DNAJC18Q9H819 358 aa27.49■■□□□ 1.99
PTPMT1-205ENST00000534775 RCOR1Q9UKL0 485 aa27.49■■□□□ 1.99
PTPMT1-205ENST00000534775 PALM3A6NDB9 673 aaPredicted RBP27.49■■□□□ 1.99
PTPMT1-205ENST00000534775 CERKLQ49MI3 558 aaPredicted RBP27.49■■□□□ 1.99
PTPMT1-205ENST00000534775 TATDN1Q6P1N9 297 aa27.49■■□□□ 1.99
PTPMT1-205ENST00000534775 USP28Q96RU2 1077 aa27.49■■□□□ 1.99
PTPMT1-205ENST00000534775 RTEL1Q9NZ71 1219 aa27.49■■□□□ 1.99
PTPMT1-205ENST00000534775 CLRN2A0PK11 232 aa27.48■■□□□ 1.99
PTPMT1-205ENST00000534775 MPHOSPH10O00566 681 aaKnown RBP27.48■■□□□ 1.99
PTPMT1-205ENST00000534775 PARP1P09874 1014 aaKnown RBP27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms