RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 RNF113AO15541 343 aaKnown RBP12.49□□□□□ -0.41
CSDE1-217ENST00000534699 HMGCRP04035 888 aa12.49□□□□□ -0.41
CSDE1-217ENST00000534699 HTATIP2Q9BUP3 242 aa12.49□□□□□ -0.41
CSDE1-217ENST00000534699 ARHGAP39Q9C0H5 1083 aa12.49□□□□□ -0.41
CSDE1-217ENST00000534699 EMILIN3Q9NT22 766 aa12.49□□□□□ -0.41
CSDE1-217ENST00000534699 CTGFP29279 349 aa12.48□□□□□ -0.41
CSDE1-217ENST00000534699 CAP1Q01518 475 aa12.48□□□□□ -0.41
CSDE1-217ENST00000534699 NUDT12Q9BQG2 462 aa12.48□□□□□ -0.41
CSDE1-217ENST00000534699 STAP2Q9UGK3 403 aa12.48□□□□□ -0.41
CSDE1-217ENST00000534699 PARP14Q460N5 1801 aa12.48□□□□□ -0.41
CSDE1-217ENST00000534699 SLC15A5A6NIM6 579 aa12.48□□□□□ -0.41
CSDE1-217ENST00000534699 PRKCZQ05513 592 aa12.48□□□□□ -0.41
CSDE1-217ENST00000534699 LCORLQ8N3X6 602 aa12.48□□□□□ -0.41
CSDE1-217ENST00000534699 FEZ1Q99689 392 aa12.48□□□□□ -0.41
CSDE1-217ENST00000534699 GJD2Q9UKL4 321 aa12.48□□□□□ -0.41
CSDE1-217ENST00000534699 FAM196BA6NMK8 535 aa12.47□□□□□ -0.41
CSDE1-217ENST00000534699 MBD4O95243 580 aa12.47□□□□□ -0.41
CSDE1-217ENST00000534699 CCL5P13501 91 aa12.47□□□□□ -0.41
CSDE1-217ENST00000534699 FLT3LGP49771 235 aa12.47□□□□□ -0.41
CSDE1-217ENST00000534699 C20orf194Q5TEA3 1177 aa12.47□□□□□ -0.41
CSDE1-217ENST00000534699 ANKRD13CQ8N6S4 541 aa12.47□□□□□ -0.41
CSDE1-217ENST00000534699 CRISPLD2Q9H0B8 497 aa12.47□□□□□ -0.41
CSDE1-217ENST00000534699 KANSL2Q9H9L4 492 aa12.47□□□□□ -0.41
CSDE1-217ENST00000534699 TMX2Q9Y320 296 aa12.47□□□□□ -0.41
CSDE1-217ENST00000534699 BAZ2AQ9UIF9 1905 aaKnown RBP12.47□□□□□ -0.41
CSDE1-217ENST00000534699 POTEFA5A3E0 1075 aa12.47□□□□□ -0.41
CSDE1-217ENST00000534699 WDR46O15213 610 aaKnown RBP12.47□□□□□ -0.41
CSDE1-217ENST00000534699 STRNO43815 780 aa12.47□□□□□ -0.41
CSDE1-217ENST00000534699 RGS2P41220 211 aa12.47□□□□□ -0.41
CSDE1-217ENST00000534699 ERVK-9P63128 1117 aa12.47□□□□□ -0.41
CSDE1-217ENST00000534699 ERVK-24P63145 666 aa12.47□□□□□ -0.41
CSDE1-217ENST00000534699 ABRAQ8N0Z2 381 aa12.47□□□□□ -0.41
CSDE1-217ENST00000534699 USP6NLQ92738 828 aa12.47□□□□□ -0.41
CSDE1-217ENST00000534699 STRBPQ96SI9 672 aaKnown RBP12.47□□□□□ -0.41
CSDE1-217ENST00000534699 P2RX7Q99572 595 aaKnown RBP12.47□□□□□ -0.41
CSDE1-217ENST00000534699 FDX1P10109 184 aa12.46□□□□□ -0.41
CSDE1-217ENST00000534699 PLCD1P51178 756 aa12.46□□□□□ -0.41
CSDE1-217ENST00000534699 PLEKHH3Q7Z736 793 aa12.46□□□□□ -0.41
CSDE1-217ENST00000534699 UBE2Q1Q7Z7E8 422 aa12.46□□□□□ -0.41
CSDE1-217ENST00000534699 NACAP1Q9BZK3 213 aa12.46□□□□□ -0.41
CSDE1-217ENST00000534699 PAK6Q9NQU5 681 aaPredicted RBP12.46□□□□□ -0.41
CSDE1-217ENST00000534699 RPTORQ8N122 1335 aa12.46□□□□□ -0.41
CSDE1-217ENST00000534699 RLFQ13129 1914 aa12.46□□□□□ -0.41
CSDE1-217ENST00000534699 GDF11O95390 407 aa12.46□□□□□ -0.41
CSDE1-217ENST00000534699 SGPL1O95470 568 aa12.46□□□□□ -0.41
CSDE1-217ENST00000534699 SLC3A2P08195 630 aaKnown RBP12.46□□□□□ -0.41
CSDE1-217ENST00000534699 HOXC6P09630 235 aa12.46□□□□□ -0.41
CSDE1-217ENST00000534699 GUCY1A2P33402 732 aa12.46□□□□□ -0.41
CSDE1-217ENST00000534699 COG2Q14746 738 aa12.46□□□□□ -0.41
CSDE1-217ENST00000534699 ARMT1Q9H993 441 aa12.46□□□□□ -0.41
CSDE1-217ENST00000534699 SLC5A4Q9NY91 659 aa12.46□□□□□ -0.41
CSDE1-217ENST00000534699 NRBP1Q9UHY1 535 aa12.46□□□□□ -0.41
CSDE1-217ENST00000534699 SLC4A4Q9Y6R1 1079 aa12.46□□□□□ -0.41
CSDE1-217ENST00000534699 PLIN4Q96Q06 1357 aa12.46□□□□□ -0.41
CSDE1-217ENST00000534699 MORN1Q5T089 497 aa12.45□□□□□ -0.42
CSDE1-217ENST00000534699 GOPCQ9HD26 462 aa12.45□□□□□ -0.42
CSDE1-217ENST00000534699 NYAP2Q9P242 653 aa12.45□□□□□ -0.42
CSDE1-217ENST00000534699 RBPJLQ9UBG7 517 aa12.45□□□□□ -0.42
CSDE1-217ENST00000534699 SALL3Q9BXA9 1300 aa12.45□□□□□ -0.42
CSDE1-217ENST00000534699 PATL2C9JE40 543 aaKnown RBP12.45□□□□□ -0.42
CSDE1-217ENST00000534699 CDK8P49336 464 aa12.45□□□□□ -0.42
CSDE1-217ENST00000534699 JAG1P78504 1218 aa12.45□□□□□ -0.42
CSDE1-217ENST00000534699 MAP3K21Q5TCX8 1036 aa12.45□□□□□ -0.42
CSDE1-217ENST00000534699 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.45□□□□□ -0.42
CSDE1-217ENST00000534699 APBA2Q99767 749 aa12.45□□□□□ -0.42
CSDE1-217ENST00000534699 MROH8Q9H579 483 aa12.45□□□□□ -0.42
CSDE1-217ENST00000534699 VCPKMTQ9H867 229 aa12.45□□□□□ -0.42
CSDE1-217ENST00000534699 GABRQQ9UN88 632 aa12.45□□□□□ -0.42
CSDE1-217ENST00000534699 APBB1O00213 710 aa12.45□□□□□ -0.42
CSDE1-217ENST00000534699 MSCO60682 206 aa12.45□□□□□ -0.42
CSDE1-217ENST00000534699 SLC34A2O95436 690 aa12.45□□□□□ -0.42
CSDE1-217ENST00000534699 SLC25A27O95847 323 aa12.45□□□□□ -0.42
CSDE1-217ENST00000534699 VCAM1P19320 739 aa12.45□□□□□ -0.42
CSDE1-217ENST00000534699 RWDD1Q9H446 243 aaPredicted RBP12.45□□□□□ -0.42
CSDE1-217ENST00000534699 ZMYM6O95789 1325 aa12.44□□□□□ -0.42
CSDE1-217ENST00000534699 INHAP05111 366 aa12.44□□□□□ -0.42
CSDE1-217ENST00000534699 PCP11498 1178 aaKnown RBP12.44□□□□□ -0.42
CSDE1-217ENST00000534699 ALX1Q15699 326 aa12.44□□□□□ -0.42
CSDE1-217ENST00000534699 CTR9Q6PD62 1173 aa12.44□□□□□ -0.42
CSDE1-217ENST00000534699 CCAR1Q8IX12 1150 aaKnown RBP12.44□□□□□ -0.42
CSDE1-217ENST00000534699 SH3TC2Q8TF17 1288 aa12.44□□□□□ -0.42
CSDE1-217ENST00000534699 EVI5LQ96CN4 794 aa12.44□□□□□ -0.42
CSDE1-217ENST00000534699 BIN2Q9UBW5 565 aaPredicted RBP12.44□□□□□ -0.42
CSDE1-217ENST00000534699 EN2P19622 333 aaPredicted RBP12.44□□□□□ -0.42
CSDE1-217ENST00000534699 MX1P20591 662 aa12.44□□□□□ -0.42
CSDE1-217ENST00000534699 RAB3GAP1Q15042 981 aa12.44□□□□□ -0.42
CSDE1-217ENST00000534699 PI4K2BQ8TCG2 481 aa12.44□□□□□ -0.42
CSDE1-217ENST00000534699 HMX1Q9NP08 348 aaPredicted RBP12.44□□□□□ -0.42
CSDE1-217ENST00000534699 HELLSQ9NRZ9 838 aa12.44□□□□□ -0.42
CSDE1-217ENST00000534699 ADAMTS5Q9UNA0 930 aa12.44□□□□□ -0.42
CSDE1-217ENST00000534699 PCDHB15Q9Y5E8 787 aa12.44□□□□□ -0.42
CSDE1-217ENST00000534699 USP17L12C9JPN9 530 aa12.43□□□□□ -0.42
CSDE1-217ENST00000534699 USP17L21D6R901 530 aa12.43□□□□□ -0.42
CSDE1-217ENST00000534699 PTPREP23469 700 aa12.43□□□□□ -0.42
CSDE1-217ENST00000534699 DSG3P32926 999 aa12.43□□□□□ -0.42
CSDE1-217ENST00000534699 ICA1Q05084 483 aa12.43□□□□□ -0.42
CSDE1-217ENST00000534699 MAP2K5Q13163 448 aa12.43□□□□□ -0.42
CSDE1-217ENST00000534699 SEPT2Q15019 361 aa12.43□□□□□ -0.42
CSDE1-217ENST00000534699 ZMYM1Q5SVZ6 1142 aa12.43□□□□□ -0.42
CSDE1-217ENST00000534699 SDR42E1Q8WUS8 393 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms