RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 STRCQ7RTU9 1775 aa21.7■■□□□ 1.06
SMPD1-210ENST00000534405 KLHL33A6NCF5 533 aa21.7■■□□□ 1.06
SMPD1-210ENST00000534405 LRRIQ3A6PVS8 624 aaPredicted RBP21.7■■□□□ 1.06
SMPD1-210ENST00000534405 B4E1Z4 1266 aa21.7■■□□□ 1.06
SMPD1-210ENST00000534405 PDE8AO60658 829 aa21.7■■□□□ 1.06
SMPD1-210ENST00000534405 SYF2O95926 243 aaKnown RBP21.7■■□□□ 1.06
SMPD1-210ENST00000534405 ARID4AP29374 1257 aaPredicted RBP21.7■■□□□ 1.06
SMPD1-210ENST00000534405 TTF1Q15361 905 aaPredicted RBP21.7■■□□□ 1.06
SMPD1-210ENST00000534405 ZSWIM4Q9H7M6 989 aa21.7■■□□□ 1.06
SMPD1-210ENST00000534405 VEZTQ9HBM0 779 aa21.7■■□□□ 1.06
SMPD1-210ENST00000534405 KIAA1468Q9P260 1216 aa21.7■■□□□ 1.06
SMPD1-210ENST00000534405 ZMYM6O95789 1325 aa21.69■■□□□ 1.06
SMPD1-210ENST00000534405 CBFA2T2O43439 604 aa21.69■■□□□ 1.06
SMPD1-210ENST00000534405 CDC27P30260 824 aa21.69■■□□□ 1.06
SMPD1-210ENST00000534405 CTCFLQ8NI51 663 aaPredicted RBP21.69■■□□□ 1.06
SMPD1-210ENST00000534405 CCDC12Q8WUD4 166 aaPredicted RBP21.69■■□□□ 1.06
SMPD1-210ENST00000534405 IKBKBO14920 756 aa21.69■■□□□ 1.06
SMPD1-210ENST00000534405 GCFC2P16383 781 aaKnown RBP21.69■■□□□ 1.06
SMPD1-210ENST00000534405 CCT5P48643 541 aa21.69■■□□□ 1.06
SMPD1-210ENST00000534405 VSNL1P62760 191 aa21.69■■□□□ 1.06
SMPD1-210ENST00000534405 IRX1P78414 480 aaPredicted RBP21.69■■□□□ 1.06
SMPD1-210ENST00000534405 BIRC2Q13490 618 aa21.69■■□□□ 1.06
SMPD1-210ENST00000534405 VSTM4Q8IW00 320 aa21.69■■□□□ 1.06
SMPD1-210ENST00000534405 TAOK2Q9UL54 1235 aa21.69■■□□□ 1.06
SMPD1-210ENST00000534405 DISP2A7MBM2 1401 aa21.69■■□□□ 1.06
SMPD1-210ENST00000534405 PREPLQ4J6C6 727 aaPredicted RBP21.68■■□□□ 1.06
SMPD1-210ENST00000534405 ANO1Q5XXA6 986 aa21.68■■□□□ 1.06
SMPD1-210ENST00000534405 APOA5Q6Q788 366 aa21.68■■□□□ 1.06
SMPD1-210ENST00000534405 DZIP3Q86Y13 1208 aaKnown RBP21.68■■□□□ 1.06
SMPD1-210ENST00000534405 MROH7-TTC4A0A0A0MT08 1334 aa21.68■■□□□ 1.06
SMPD1-210ENST00000534405 ATXN2Q99700 1313 aaKnown RBP21.68■■□□□ 1.06
SMPD1-210ENST00000534405 FGFR2P21802 821 aa21.68■■□□□ 1.06
SMPD1-210ENST00000534405 METAP2P50579 478 aaKnown RBP eCLIP21.68■■□□□ 1.06
SMPD1-210ENST00000534405 TUBB2AQ13885 445 aa21.68■■□□□ 1.06
SMPD1-210ENST00000534405 TEX11Q8IYF3 940 aa21.68■■□□□ 1.06
SMPD1-210ENST00000534405 PHKBQ93100 1093 aa21.68■■□□□ 1.06
SMPD1-210ENST00000534405 STRBPQ96SI9 672 aaKnown RBP21.68■■□□□ 1.06
SMPD1-210ENST00000534405 TUBB2BQ9BVA1 445 aa21.68■■□□□ 1.06
SMPD1-210ENST00000534405 CDC23Q9UJX2 597 aa21.68■■□□□ 1.06
SMPD1-210ENST00000534405 CHUKO15111 745 aa21.67■■□□□ 1.06
SMPD1-210ENST00000534405 SYNE3Q6ZMZ3 975 aa21.67■■□□□ 1.06
SMPD1-210ENST00000534405 ZKSCAN4Q969J2 545 aaPredicted RBP21.67■■□□□ 1.06
SMPD1-210ENST00000534405 ALG1Q9BT22 464 aa21.67■■□□□ 1.06
SMPD1-210ENST00000534405 EPB41L4AQ9HCS5 686 aaPredicted RBP21.67■■□□□ 1.06
SMPD1-210ENST00000534405 TACC3Q9Y6A5 838 aa21.67■■□□□ 1.06
SMPD1-210ENST00000534405 TMCO5BA8MYB1 307 aa21.67■■□□□ 1.06
SMPD1-210ENST00000534405 UBE2Q2LH0YL09 131 aa21.67■■□□□ 1.06
SMPD1-210ENST00000534405 NLRP12P59046 1061 aa21.67■■□□□ 1.06
SMPD1-210ENST00000534405 MICU3Q86XE3 530 aa21.67■■□□□ 1.06
SMPD1-210ENST00000534405 IGDCC4Q8TDY8 1250 aa21.67■■□□□ 1.06
SMPD1-210ENST00000534405 MYL10Q9BUA6 226 aa21.67■■□□□ 1.06
SMPD1-210ENST00000534405 HSD3B7Q9H2F3 369 aa21.67■■□□□ 1.06
SMPD1-210ENST00000534405 PUF60Q9UHX1 559 aaKnown RBP21.67■■□□□ 1.06
SMPD1-210ENST00000534405 STX10O60499 249 aa21.66■■□□□ 1.06
SMPD1-210ENST00000534405 ZNF202O95125 648 aa21.66■■□□□ 1.06
SMPD1-210ENST00000534405 MARCKSP29966 332 aaPredicted RBP21.66■■□□□ 1.06
SMPD1-210ENST00000534405 FNTAP49354 379 aa21.66■■□□□ 1.06
SMPD1-210ENST00000534405 FMNL3Q8IVF7 1028 aa21.66■■□□□ 1.06
SMPD1-210ENST00000534405 AMOTL1Q8IY63 956 aa21.66■■□□□ 1.06
SMPD1-210ENST00000534405 ZNF34Q8IZ26 560 aa21.66■■□□□ 1.06
SMPD1-210ENST00000534405 NHSL1Q5SYE7 1610 aa21.66■■□□□ 1.06
SMPD1-210ENST00000534405 UBASH3AP57075 661 aa21.66■■□□□ 1.06
SMPD1-210ENST00000534405 PUM3Q15397 648 aaKnown RBP21.66■■□□□ 1.06
SMPD1-210ENST00000534405 LPIN2Q92539 896 aa21.66■■□□□ 1.06
SMPD1-210ENST00000534405 N4BP2L2Q92802 583 aaPredicted RBP21.66■■□□□ 1.06
SMPD1-210ENST00000534405 BAG1Q99933 345 aaPredicted RBP21.66■■□□□ 1.06
SMPD1-210ENST00000534405 LRP5O75197 1615 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 BIN1O00499 593 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 TOP1P11387 765 aaKnown RBP21.65■■□□□ 1.06
SMPD1-210ENST00000534405 PFKFB1P16118 471 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 LMOD1P29536 600 aaPredicted RBP21.65■■□□□ 1.06
SMPD1-210ENST00000534405 NTRK3Q16288 839 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 KRT40Q6A162 431 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 TOGARAM2Q6ZUX3 1019 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 VPS37DQ86XT2 251 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 FAM217BQ9NTX9 383 aaPredicted RBP21.65■■□□□ 1.06
SMPD1-210ENST00000534405 RANBP6O60518 1105 aaKnown RBP21.65■■□□□ 1.06
SMPD1-210ENST00000534405 NEBLO76041 1014 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 UQCRFS1P1P0C7P4 283 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 NF2P35240 595 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 INHBEP58166 350 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 GOLGA8FQ08AF8 430 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 GOLGA8DPQ0D2H9 430 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 RASGRF1Q13972 1273 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 CRYMQ14894 314 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 DPF2Q92785 391 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 AIDAQ96BJ3 306 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 LY9Q9HBG7 655 aa21.65■■□□□ 1.06
SMPD1-210ENST00000534405 ERVV-1B6SEH8 477 aa21.64■■□□□ 1.05
SMPD1-210ENST00000534405 H0YHG0 523 aa21.64■■□□□ 1.05
SMPD1-210ENST00000534405 ATP1A3P13637 1013 aa21.64■■□□□ 1.05
SMPD1-210ENST00000534405 RDXP35241 583 aaKnown RBP21.64■■□□□ 1.05
SMPD1-210ENST00000534405 SARNPP82979 210 aaKnown RBP21.64■■□□□ 1.05
SMPD1-210ENST00000534405 SLC39A14Q15043 492 aa21.64■■□□□ 1.05
SMPD1-210ENST00000534405 IGSF22Q8N9C0 903 aa21.64■■□□□ 1.05
SMPD1-210ENST00000534405 SPATA5Q8NB90 893 aa21.64■■□□□ 1.05
SMPD1-210ENST00000534405 SMARCC1Q92922 1105 aaPredicted RBP21.64■■□□□ 1.05
SMPD1-210ENST00000534405 ECM29Q5VYK3 1845 aa21.64■■□□□ 1.05
SMPD1-210ENST00000534405 FSBPO95073 299 aa21.64■■□□□ 1.05
SMPD1-210ENST00000534405 MRPL12P52815 198 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms