RNA–Protein interactions for RNA: ENST00000534237.5

CTSH-215, Transcript of cathepsin H, human

TSL 3

Gene CTSH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSH-215	ENST00000534237	CCDC129	Q6ZRS4	1044 aa		13.4	□□□□□ -0.26
CTSH-215	ENST00000534237	METTL16	Q86W50	562 aa	Known RBP	13.4	□□□□□ -0.26
CTSH-215	ENST00000534237	ACER1	Q8TDN7	264 aa		13.4	□□□□□ -0.26
CTSH-215	ENST00000534237	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.4	□□□□□ -0.26
CTSH-215	ENST00000534237	EMILIN3	Q9NT22	766 aa		13.4	□□□□□ -0.26
CTSH-215	ENST00000534237	ZBTB21	Q9ULJ3	1066 aa		13.4	□□□□□ -0.26
CTSH-215	ENST00000534237	COLQ	Q9Y215	455 aa	Predicted RBP	13.4	□□□□□ -0.26
CTSH-215	ENST00000534237	ALPK3	Q96L96	1907 aa		13.39	□□□□□ -0.27
CTSH-215	ENST00000534237	GNRH1	P01148	92 aa		13.39	□□□□□ -0.27
CTSH-215	ENST00000534237	GH2	P01242	217 aa		13.39	□□□□□ -0.27
CTSH-215	ENST00000534237		Q3C1V9	767 aa		13.39	□□□□□ -0.27
CTSH-215	ENST00000534237	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.39	□□□□□ -0.27
CTSH-215	ENST00000534237	FAM227B	Q96M60	508 aa		13.39	□□□□□ -0.27
CTSH-215	ENST00000534237	STRBP	Q96SI9	672 aa	Known RBP	13.39	□□□□□ -0.27
CTSH-215	ENST00000534237	GJD2	Q9UKL4	321 aa		13.39	□□□□□ -0.27
CTSH-215	ENST00000534237	SLC45A1	Q9Y2W3	748 aa		13.39	□□□□□ -0.27
CTSH-215	ENST00000534237	SLC4A4	Q9Y6R1	1079 aa		13.39	□□□□□ -0.27
CTSH-215	ENST00000534237	LAMA2	P24043	3122 aa	Known RBP	13.38	□□□□□ -0.27
CTSH-215	ENST00000534237		A0A0D9SFI3	127 aa		13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	GPAA1	O43292	621 aa		13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	SDS	P20132	328 aa		13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	HOXD10	P28358	340 aa		13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	PRMT2	P55345	433 aa		13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	BACE1	P56817	501 aa		13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	NMI	Q13287	307 aa	Predicted RBP	13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	SH3D19	Q5HYK7	790 aa		13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	UBE2Q1	Q7Z7E8	422 aa		13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	CERS3	Q8IU89	383 aa		13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	U2AF1L4	Q8WU68	220 aa	Known RBP	13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	DEFB118	Q96PH6	123 aa		13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	WDR18	Q9BV38	432 aa		13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	HERC5	Q9UII4	1024 aa	Known RBP	13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	LAMA3	Q16787	3333 aa		13.38	□□□□□ -0.27
CTSH-215	ENST00000534237	CYP2D7	A0A087X1C5	515 aa		13.37	□□□□□ -0.27
CTSH-215	ENST00000534237	GJB1	P08034	283 aa		13.37	□□□□□ -0.27
CTSH-215	ENST00000534237	GUCY1A2	P33402	732 aa		13.37	□□□□□ -0.27
CTSH-215	ENST00000534237	SHMT1	P34896	483 aa		13.37	□□□□□ -0.27
CTSH-215	ENST00000534237	GJA8	P48165	433 aa		13.37	□□□□□ -0.27
CTSH-215	ENST00000534237	CLEC10A	Q8IUN9	316 aa		13.37	□□□□□ -0.27
CTSH-215	ENST00000534237	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.37	□□□□□ -0.27
CTSH-215	ENST00000534237	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.37	□□□□□ -0.27
CTSH-215	ENST00000534237	SLC44A5	Q8NCS7	719 aa		13.37	□□□□□ -0.27
CTSH-215	ENST00000534237	DIS3L	Q8TF46	1054 aa	Known RBP	13.37	□□□□□ -0.27
CTSH-215	ENST00000534237	PORCN	Q9H237	461 aa		13.37	□□□□□ -0.27
CTSH-215	ENST00000534237	RBPJL	Q9UBG7	517 aa		13.37	□□□□□ -0.27
CTSH-215	ENST00000534237	NAV1	Q8NEY1	1877 aa		13.37	□□□□□ -0.27
CTSH-215	ENST00000534237	DDX60L	Q5H9U9	1706 aa	Known RBP	13.36	□□□□□ -0.27
CTSH-215	ENST00000534237	GSG1L2	A8MUP6	293 aa		13.36	□□□□□ -0.27
CTSH-215	ENST00000534237	FAM110C	Q1W6H9	321 aa		13.36	□□□□□ -0.27
CTSH-215	ENST00000534237	KIAA1755	Q5JYT7	1200 aa		13.36	□□□□□ -0.27
CTSH-215	ENST00000534237	DPF3	Q92784	378 aa		13.36	□□□□□ -0.27
CTSH-215	ENST00000534237	DYNLL2	Q96FJ2	89 aa		13.36	□□□□□ -0.27
CTSH-215	ENST00000534237	DHX36	Q9H2U1	1008 aa	Known RBP	13.36	□□□□□ -0.27
CTSH-215	ENST00000534237	MCM9	Q9NXL9	1143 aa		13.36	□□□□□ -0.27
CTSH-215	ENST00000534237	CNMD	O75829	334 aa		13.35	□□□□□ -0.27
CTSH-215	ENST00000534237	SGPL1	O95470	568 aa		13.35	□□□□□ -0.27
CTSH-215	ENST00000534237	POLR3D	P05423	398 aa	Predicted RBP	13.35	□□□□□ -0.27
CTSH-215	ENST00000534237	ASNS	P08243	561 aa		13.35	□□□□□ -0.27
CTSH-215	ENST00000534237	CYP2B6	P20813	491 aa		13.35	□□□□□ -0.27
CTSH-215	ENST00000534237	HERVK_113	P62684	666 aa		13.35	□□□□□ -0.27
CTSH-215	ENST00000534237	RAB3GAP1	Q15042	981 aa		13.35	□□□□□ -0.27
CTSH-215	ENST00000534237	TATDN1	Q6P1N9	297 aa		13.35	□□□□□ -0.27
CTSH-215	ENST00000534237	CWC27	Q6UX04	472 aa	Known RBP	13.35	□□□□□ -0.27
CTSH-215	ENST00000534237	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.35	□□□□□ -0.27
CTSH-215	ENST00000534237	SLAIN1	Q8ND83	568 aa		13.35	□□□□□ -0.27
CTSH-215	ENST00000534237	PAGR1	Q9BTK6	254 aa		13.35	□□□□□ -0.27
CTSH-215	ENST00000534237	TRIM34	Q9BYJ4	488 aa		13.35	□□□□□ -0.27
CTSH-215	ENST00000534237	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.35	□□□□□ -0.27
CTSH-215	ENST00000534237	HELLS	Q9NRZ9	838 aa		13.35	□□□□□ -0.27
CTSH-215	ENST00000534237	ATP8A2	Q9NTI2	1148 aa		13.35	□□□□□ -0.27
CTSH-215	ENST00000534237	USP17L10	C9JJH3	530 aa		13.34	□□□□□ -0.27
CTSH-215	ENST00000534237	USP17L12	C9JPN9	530 aa		13.34	□□□□□ -0.27
CTSH-215	ENST00000534237	USP17L21	D6R901	530 aa		13.34	□□□□□ -0.27
CTSH-215	ENST00000534237	APP	P05067	770 aa		13.34	□□□□□ -0.27
CTSH-215	ENST00000534237	HLA-DOA	P06340	250 aa		13.34	□□□□□ -0.27
CTSH-215	ENST00000534237	FXR1	P51114	621 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
CTSH-215	ENST00000534237	UBXN2A	P68543	259 aa		13.34	□□□□□ -0.27
CTSH-215	ENST00000534237	IRX3	P78415	501 aa	Predicted RBP	13.34	□□□□□ -0.27
CTSH-215	ENST00000534237	IRF5	Q13568	498 aa		13.34	□□□□□ -0.27
CTSH-215	ENST00000534237	SEPT2	Q15019	361 aa		13.34	□□□□□ -0.27
CTSH-215	ENST00000534237	CCL14	Q16627	93 aa		13.34	□□□□□ -0.27
CTSH-215	ENST00000534237	MCMDC2	Q4G0Z9	681 aa		13.34	□□□□□ -0.27
CTSH-215	ENST00000534237	VPS53	Q5VIR6	699 aa		13.34	□□□□□ -0.27
CTSH-215	ENST00000534237	CHRDL2	Q6WN34	429 aa		13.34	□□□□□ -0.27
CTSH-215	ENST00000534237	COA7	Q96BR5	231 aa		13.34	□□□□□ -0.27
CTSH-215	ENST00000534237	AS3MT	Q9HBK9	375 aa		13.34	□□□□□ -0.27
CTSH-215	ENST00000534237	DIAPH3	Q9NSV4	1193 aa		13.34	□□□□□ -0.27
CTSH-215	ENST00000534237	PNMA3	Q9UL41	463 aa		13.34	□□□□□ -0.27
CTSH-215	ENST00000534237		A0A1W2PRG0	241 aa		13.33	□□□□□ -0.28
CTSH-215	ENST00000534237	PATL2	C9JE40	543 aa	Known RBP	13.33	□□□□□ -0.28
CTSH-215	ENST00000534237	FOXP2	O15409	715 aa		13.33	□□□□□ -0.28
CTSH-215	ENST00000534237	FARP2	O94887	1054 aa	Predicted RBP	13.33	□□□□□ -0.28
CTSH-215	ENST00000534237	TFRC	P02786	760 aa	Known RBP	13.33	□□□□□ -0.28
CTSH-215	ENST00000534237	HOXA7	P31268	230 aa	Predicted RBP	13.33	□□□□□ -0.28
CTSH-215	ENST00000534237	MNX1	P50219	401 aa	Predicted RBP	13.33	□□□□□ -0.28
CTSH-215	ENST00000534237	CTR9	Q6PD62	1173 aa		13.33	□□□□□ -0.28
CTSH-215	ENST00000534237	TTC6	Q86TZ1	520 aa		13.33	□□□□□ -0.28

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