RNA–Protein interactions for RNA: ENST00000534208.5

NDUFS3-212, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4 BASIC

Gene NDUFS3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-212ENST00000534208 HAUS7Q99871 368 aa23.91■■□□□ 1.42
NDUFS3-212ENST00000534208 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.91■■□□□ 1.42
NDUFS3-212ENST00000534208 DCP1AQ9NPI6 582 aaPredicted RBP23.91■■□□□ 1.42
NDUFS3-212ENST00000534208 USP17L15C9J2P7 530 aa23.9■■□□□ 1.42
NDUFS3-212ENST00000534208 USP17L13C9JLJ4 530 aa23.9■■□□□ 1.42
NDUFS3-212ENST00000534208 USP17L11C9JVI0 530 aa23.9■■□□□ 1.42
NDUFS3-212ENST00000534208 USP17L18D6R9N7 530 aa23.9■■□□□ 1.42
NDUFS3-212ENST00000534208 USP17L22D6RA61 530 aa23.9■■□□□ 1.42
NDUFS3-212ENST00000534208 USP17L17D6RBQ6 530 aa23.9■■□□□ 1.42
NDUFS3-212ENST00000534208 USP17L19D6RCP7 530 aa23.9■■□□□ 1.42
NDUFS3-212ENST00000534208 USP17L20D6RJB6 530 aa23.9■■□□□ 1.42
NDUFS3-212ENST00000534208 TFRCP02786 760 aaKnown RBP23.9■■□□□ 1.42
NDUFS3-212ENST00000534208 XRCC5P13010 732 aaKnown RBP23.9■■□□□ 1.42
NDUFS3-212ENST00000534208 GUCY1A2P33402 732 aa23.9■■□□□ 1.42
NDUFS3-212ENST00000534208 USP17L24Q0WX57 530 aa23.9■■□□□ 1.42
NDUFS3-212ENST00000534208 Q3C1V9 767 aa23.9■■□□□ 1.42
NDUFS3-212ENST00000534208 ACER1Q8TDN7 264 aa23.9■■□□□ 1.42
NDUFS3-212ENST00000534208 NUDT12Q9BQG2 462 aa23.9■■□□□ 1.42
NDUFS3-212ENST00000534208 BOLA2Q9H3K6 86 aa23.9■■□□□ 1.42
NDUFS3-212ENST00000534208 COLQQ9Y215 455 aaPredicted RBP23.9■■□□□ 1.42
NDUFS3-212ENST00000534208 VCAM1P19320 739 aa23.89■■□□□ 1.41
NDUFS3-212ENST00000534208 ADD2P35612 726 aa23.89■■□□□ 1.41
NDUFS3-212ENST00000534208 SDR42E1Q8WUS8 393 aa23.89■■□□□ 1.41
NDUFS3-212ENST00000534208 LRRCC1Q9C099 1032 aa23.89■■□□□ 1.41
NDUFS3-212ENST00000534208 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.89■■□□□ 1.41
NDUFS3-212ENST00000534208 BCL11AQ9H165 835 aa23.89■■□□□ 1.41
NDUFS3-212ENST00000534208 RABGAP1Q9Y3P9 1069 aa23.89■■□□□ 1.41
NDUFS3-212ENST00000534208 TRIOBPQ9H2D6 2365 aa23.89■■□□□ 1.41
NDUFS3-212ENST00000534208 RPTORQ8N122 1335 aa23.88■■□□□ 1.41
NDUFS3-212ENST00000534208 ZYXQ15942 572 aaKnown RBP23.88■■□□□ 1.41
NDUFS3-212ENST00000534208 LBX2Q6XYB7 198 aa23.88■■□□□ 1.41
NDUFS3-212ENST00000534208 CATSPERGQ6ZRH7 1159 aa23.88■■□□□ 1.41
NDUFS3-212ENST00000534208 TRIB2Q92519 343 aa23.88■■□□□ 1.41
NDUFS3-212ENST00000534208 USP6NLQ92738 828 aa23.88■■□□□ 1.41
NDUFS3-212ENST00000534208 PAGR1Q9BTK6 254 aa23.88■■□□□ 1.41
NDUFS3-212ENST00000534208 PORCNQ9H237 461 aa23.88■■□□□ 1.41
NDUFS3-212ENST00000534208 ARMT1Q9H993 441 aa23.88■■□□□ 1.41
NDUFS3-212ENST00000534208 CYP2B6P20813 491 aa23.87■■□□□ 1.41
NDUFS3-212ENST00000534208 EVX2Q03828 476 aa23.87■■□□□ 1.41
NDUFS3-212ENST00000534208 GPR142Q7Z601 462 aa23.87■■□□□ 1.41
NDUFS3-212ENST00000534208 TRMT44Q8IYL2 757 aaKnown RBP23.87■■□□□ 1.41
NDUFS3-212ENST00000534208 HMX1Q9NP08 348 aaPredicted RBP23.87■■□□□ 1.41
NDUFS3-212ENST00000534208 ATP8A2Q9NTI2 1148 aa23.87■■□□□ 1.41
NDUFS3-212ENST00000534208 CNMDO75829 334 aa23.86■■□□□ 1.41
NDUFS3-212ENST00000534208 MBD4O95243 580 aa23.86■■□□□ 1.41
NDUFS3-212ENST00000534208 TRIM32Q13049 653 aa23.86■■□□□ 1.41
NDUFS3-212ENST00000534208 SEPT2Q15019 361 aa23.86■■□□□ 1.41
NDUFS3-212ENST00000534208 UBE3CQ15386 1083 aa23.86■■□□□ 1.41
NDUFS3-212ENST00000534208 MORN1Q5T089 497 aa23.86■■□□□ 1.41
NDUFS3-212ENST00000534208 MAP3K21Q5TCX8 1036 aa23.86■■□□□ 1.41
NDUFS3-212ENST00000534208 PLEKHH3Q7Z736 793 aa23.86■■□□□ 1.41
NDUFS3-212ENST00000534208 CCAR1Q8IX12 1150 aaKnown RBP23.86■■□□□ 1.41
NDUFS3-212ENST00000534208 ANKLE1Q8NAG6 615 aa23.86■■□□□ 1.41
NDUFS3-212ENST00000534208 SWAP70Q9UH65 585 aa23.86■■□□□ 1.41
NDUFS3-212ENST00000534208 MYH7P12883 1935 aa23.86■■□□□ 1.41
NDUFS3-212ENST00000534208 CCNA1P78396 465 aa23.85■■□□□ 1.41
NDUFS3-212ENST00000534208 NR2E3Q9Y5X4 410 aa23.85■■□□□ 1.41
NDUFS3-212ENST00000534208 RANBP2P49792 3224 aaKnown RBP23.84■■□□□ 1.41
NDUFS3-212ENST00000534208 PRKAB2O43741 272 aa23.84■■□□□ 1.41
NDUFS3-212ENST00000534208 CYP2D6P10635 497 aa23.84■■□□□ 1.41
NDUFS3-212ENST00000534208 RGS2P41220 211 aa23.84■■□□□ 1.41
NDUFS3-212ENST00000534208 FXR1P51114 621 aaKnown RBP eCLIP23.84■■□□□ 1.41
NDUFS3-212ENST00000534208 SLFNL1Q499Z3 407 aa23.84■■□□□ 1.41
NDUFS3-212ENST00000534208 YTHDC1Q96MU7 727 aaKnown RBP23.84■■□□□ 1.41
NDUFS3-212ENST00000534208 MPHOSPH10O00566 681 aaKnown RBP23.83■■□□□ 1.41
NDUFS3-212ENST00000534208 TMEM179Q6ZVK1 233 aa23.83■■□□□ 1.41
NDUFS3-212ENST00000534208 SLC44A5Q8NCS7 719 aa23.83■■□□□ 1.41
NDUFS3-212ENST00000534208 PAWRQ96IZ0 340 aaKnown RBP23.83■■□□□ 1.41
NDUFS3-212ENST00000534208 RPAP3Q9H6T3 665 aaPredicted RBP23.83■■□□□ 1.41
NDUFS3-212ENST00000534208 MYH8P13535 1937 aa23.82■■□□□ 1.4
NDUFS3-212ENST00000534208 BAZ2AQ9UIF9 1905 aaKnown RBP23.82■■□□□ 1.4
NDUFS3-212ENST00000534208 A0A1W2PRG0 241 aa23.82■■□□□ 1.4
NDUFS3-212ENST00000534208 SPDYE16A6NNV3 312 aaPredicted RBP23.82■■□□□ 1.4
NDUFS3-212ENST00000534208 SMARCA5O60264 1052 aaPredicted RBP23.82■■□□□ 1.4
NDUFS3-212ENST00000534208 PRKAR2AP13861 404 aaKnown RBP23.82■■□□□ 1.4
NDUFS3-212ENST00000534208 ZKSCAN1P17029 563 aaPredicted RBP23.82■■□□□ 1.4
NDUFS3-212ENST00000534208 ZSCAN25Q6NSZ9 544 aa23.82■■□□□ 1.4
NDUFS3-212ENST00000534208 NECAB2Q7Z6G3 386 aa23.82■■□□□ 1.4
NDUFS3-212ENST00000534208 DYNLL2Q96FJ2 89 aa23.82■■□□□ 1.4
NDUFS3-212ENST00000534208 APBA2Q99767 749 aa23.82■■□□□ 1.4
NDUFS3-212ENST00000534208 GLRX3O76003 335 aaKnown RBP23.81■■□□□ 1.4
NDUFS3-212ENST00000534208 C12orf60Q5U649 245 aa23.81■■□□□ 1.4
NDUFS3-212ENST00000534208 CHRDL2Q6WN34 429 aa23.81■■□□□ 1.4
NDUFS3-212ENST00000534208 DCTPP1Q9H773 170 aa23.81■■□□□ 1.4
NDUFS3-212ENST00000534208 ECHDC1Q9NTX5 307 aa23.81■■□□□ 1.4
NDUFS3-212ENST00000534208 OGDHLQ9ULD0 1010 aa23.81■■□□□ 1.4
NDUFS3-212ENST00000534208 CHGBP05060 677 aa23.8■■□□□ 1.4
NDUFS3-212ENST00000534208 MAP2K5Q13163 448 aa23.8■■□□□ 1.4
NDUFS3-212ENST00000534208 AMOTL1Q8IY63 956 aa23.8■■□□□ 1.4
NDUFS3-212ENST00000534208 DIS3LQ8TF46 1054 aaKnown RBP23.8■■□□□ 1.4
NDUFS3-212ENST00000534208 CCDC17Q96LX7 622 aa23.8■■□□□ 1.4
NDUFS3-212ENST00000534208 CWC22Q9HCG8 908 aaKnown RBP23.8■■□□□ 1.4
NDUFS3-212ENST00000534208 BTBD7Q9P203 1132 aa23.8■■□□□ 1.4
NDUFS3-212ENST00000534208 SLC15A5A6NIM6 579 aa23.79■■□□□ 1.4
NDUFS3-212ENST00000534208 USP17L12C9JPN9 530 aa23.79■■□□□ 1.4
NDUFS3-212ENST00000534208 USP17L21D6R901 530 aa23.79■■□□□ 1.4
NDUFS3-212ENST00000534208 EVI5O60447 810 aa23.79■■□□□ 1.4
NDUFS3-212ENST00000534208 MNX1P50219 401 aaPredicted RBP23.79■■□□□ 1.4
NDUFS3-212ENST00000534208 CACNB2Q08289 660 aaPredicted RBP23.79■■□□□ 1.4
NDUFS3-212ENST00000534208 COG2Q14746 738 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms