RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 USP17L12C9JPN9 530 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 USP17L21D6R901 530 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 PRC1O43663 620 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 TRPA1O75762 1119 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 SLC3A2P08195 630 aaKnown RBP11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 USP5P45974 858 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 NUCB2P80303 420 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 CTDSPL2Q05D32 466 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 PPIL2Q13356 520 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 IFNL1Q8IU54 200 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 CDAN1Q8IWY9 1227 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 AMOTL1Q8IY63 956 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 TEX11Q8IYF3 940 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 SPRYD3Q8NCJ5 442 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 BRF1Q92994 677 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 GTF3C6Q969F1 213 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 ZNF274Q96GC6 653 aaPredicted RBP11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 OSBPL5Q9H0X9 879 aaPredicted RBP11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 GINM1Q9NU53 330 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 HERC5Q9UII4 1024 aaKnown RBP11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 TACC3Q9Y6A5 838 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 SNCAIPQ9Y6H5 919 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 TCHHQ07283 1943 aa11.82□□□□□ -0.52
LDLRAD3-206ENST00000534091 SIPA1L1O43166 1804 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 MINDY4BA8MYZ0 360 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 B4E1Z4 1266 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 SH2B2O14492 632 aaPredicted RBP11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 CTNND1O60716 968 aaKnown RBP11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 PFKFB2O60825 505 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 CETPP11597 493 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 PDIA4P13667 645 aaKnown RBP11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 LIFRP42702 1097 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 RCAN1P53805 252 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 FGD1P98174 961 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 SNAPC2Q13487 334 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 RAB3GAP1Q15042 981 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 PKN2Q16513 984 aaKnown RBP11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 C12orf60Q5U649 245 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 SGMS1Q86VZ5 419 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 FOXP4Q8IVH2 680 aaPredicted RBP11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 ZSCAN29Q8IWY8 852 aaPredicted RBP11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 MS4A4AQ96JQ5 239 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 ELP3Q9H9T3 547 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 DDX4Q9NQI0 724 aaKnown RBP11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 MCM9Q9NXL9 1143 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 PI4KBQ9UBF8 816 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 GREB1LQ9C091 1923 aaPredicted RBP11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 CASP8AP2Q9UKL3 1982 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 FLT1P17948 1338 aa11.81□□□□□ -0.52
LDLRAD3-206ENST00000534091 NID2Q14112 1375 aa11.8□□□□□ -0.52
LDLRAD3-206ENST00000534091 CXCL11O14625 94 aa11.8□□□□□ -0.52
LDLRAD3-206ENST00000534091 CYB5R4Q7L1T6 521 aa11.8□□□□□ -0.52
LDLRAD3-206ENST00000534091 METTL16Q86W50 562 aaKnown RBP11.8□□□□□ -0.52
LDLRAD3-206ENST00000534091 CCDC83Q8IWF9 413 aa11.8□□□□□ -0.52
LDLRAD3-206ENST00000534091 SCYL3Q8IZE3 742 aa11.8□□□□□ -0.52
LDLRAD3-206ENST00000534091 TGFBRAP1Q8WUH2 860 aa11.8□□□□□ -0.52
LDLRAD3-206ENST00000534091 ESR2Q92731 530 aa11.8□□□□□ -0.52
LDLRAD3-206ENST00000534091 LLPHQ9BRT6 129 aaKnown RBP11.8□□□□□ -0.52
LDLRAD3-206ENST00000534091 LRRC2Q9BYS8 371 aa11.8□□□□□ -0.52
LDLRAD3-206ENST00000534091 FOXD4L1Q9NU39 408 aa11.8□□□□□ -0.52
LDLRAD3-206ENST00000534091 FZD1Q9UP38 647 aa11.8□□□□□ -0.52
LDLRAD3-206ENST00000534091 KCNH4Q9UQ05 1017 aa11.8□□□□□ -0.52
LDLRAD3-206ENST00000534091 DOCK1Q14185 1865 aa11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 DDTLA6NHG4 134 aaPredicted RBP11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 PHF20L1A8MW92 1017 aa11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 KDM4AO75164 1064 aa11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 GJA5P36382 358 aa11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 PDE4BQ07343 736 aa11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 APOBRQ0VD83 1088 aa11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 PICALMQ13492 652 aa11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 SART3Q15020 963 aaKnown RBP11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 MIGA2Q7L4E1 593 aa11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 SH3BP5LQ7L8J4 393 aa11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 MAPKAPK5Q8IW41 473 aa11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 TMTC2Q8N394 836 aa11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 IGDCC4Q8TDY8 1250 aa11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 OTUD5Q96G74 571 aa11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 PICK1Q9NRD5 415 aa11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 ZSWIM5Q9P217 1185 aa11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 SMC3Q9UQE7 1217 aa11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 MYH15Q9Y2K3 1946 aa11.79□□□□□ -0.52
LDLRAD3-206ENST00000534091 CYP2D7A0A087X1C5 515 aa11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 GPR25O00155 361 aa11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 HLA-DOAP06340 250 aa11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 PDIA3P30101 505 aaKnown RBP11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 INPP5BP32019 993 aa11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 SCRN1Q12765 414 aa11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 ARHGEF6Q15052 776 aa11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 CLEC17AQ6ZS10 378 aa11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 CHST3Q7LGC8 479 aa11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 ZFPM1Q8IX07 1006 aa11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 SMARCC2Q8TAQ2 1214 aa11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 NKX2-3Q8TAU0 364 aa11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 ZKSCAN4Q969J2 545 aaPredicted RBP11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 LARP6Q9BRS8 491 aaKnown RBP11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 EHD4Q9H223 541 aa11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 LY9Q9HBG7 655 aa11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 ZNF287Q9HBT7 754 aa11.78□□□□□ -0.52
LDLRAD3-206ENST00000534091 CCL15-CCL14A0A0B4J2E2 113 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms