RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-223ENST00000533979 DNAJB8Q8NHS0 232 aa7.42□□□□□ -1.22
ATM-223ENST00000533979 PPP1R13LQ8WUF5 828 aa7.42□□□□□ -1.22
ATM-223ENST00000533979 ZNF296Q8WUU4 475 aaPredicted RBP7.42□□□□□ -1.22
ATM-223ENST00000533979 GGT7Q9UJ14 662 aa7.42□□□□□ -1.22
ATM-223ENST00000533979 POLR3KQ9Y2Y1 108 aaPredicted RBP7.42□□□□□ -1.22
ATM-223ENST00000533979 SUPT16HQ9Y5B9 1047 aaKnown RBP7.42□□□□□ -1.22
ATM-223ENST00000533979 ZP2Q05996 745 aa7.41□□□□□ -1.22
ATM-223ENST00000533979 CDKAL1Q5VV42 579 aa7.41□□□□□ -1.22
ATM-223ENST00000533979 REC114Q7Z4M0 266 aa7.41□□□□□ -1.22
ATM-223ENST00000533979 TMEM87AQ8NBN3 555 aa7.41□□□□□ -1.22
ATM-223ENST00000533979 FAM13CQ8NE31 585 aa7.41□□□□□ -1.22
ATM-223ENST00000533979 DPH2Q9BQC3 489 aaPredicted RBP7.41□□□□□ -1.22
ATM-223ENST00000533979 LRRC3Q9BY71 257 aa7.41□□□□□ -1.22
ATM-223ENST00000533979 KRTAP9-2Q9BYQ4 174 aa7.41□□□□□ -1.22
ATM-223ENST00000533979 REV1Q9UBZ9 1251 aa7.41□□□□□ -1.22
ATM-223ENST00000533979 ADAMTS6Q9UKP5 1117 aa7.41□□□□□ -1.22
ATM-223ENST00000533979 RBM47A0AV96 593 aaKnown RBP7.4□□□□□ -1.22
ATM-223ENST00000533979 CHURC1-FNTBB4DL54 471 aa7.4□□□□□ -1.22
ATM-223ENST00000533979 ATE1O95260 518 aa7.4□□□□□ -1.22
ATM-223ENST00000533979 HTR3BO95264 441 aa7.4□□□□□ -1.22
ATM-223ENST00000533979 TNK2Q07912 1038 aa7.4□□□□□ -1.22
ATM-223ENST00000533979 IKZF1Q13422 519 aa7.4□□□□□ -1.22
ATM-223ENST00000533979 MLECQ14165 292 aa7.4□□□□□ -1.22
ATM-223ENST00000533979 CWF19L2Q2TBE0 894 aaKnown RBP7.4□□□□□ -1.22
ATM-223ENST00000533979 CYB5D2Q8WUJ1 264 aa7.4□□□□□ -1.22
ATM-223ENST00000533979 UBE2FQ969M7 185 aa7.4□□□□□ -1.22
ATM-223ENST00000533979 RC3H2Q9HBD1 1191 aaKnown RBP7.4□□□□□ -1.22
ATM-223ENST00000533979 FBXO27Q8NI29 283 aa7.39□□□□□ -1.23
ATM-223ENST00000533979 CCDC74BQ96LY2 380 aa7.39□□□□□ -1.23
ATM-223ENST00000533979 BACH2Q9BYV9 841 aa7.39□□□□□ -1.23
ATM-223ENST00000533979 ATP13A1Q9HD20 1204 aa7.39□□□□□ -1.23
ATM-223ENST00000533979 ZSWIM5Q9P217 1185 aa7.39□□□□□ -1.23
ATM-223ENST00000533979 SHROOM4Q9ULL8 1493 aa7.38□□□□□ -1.23
ATM-223ENST00000533979 SLC22A31A6NKX4 558 aa7.38□□□□□ -1.23
ATM-223ENST00000533979 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.38□□□□□ -1.23
ATM-223ENST00000533979 GRIN3BO60391 1043 aa7.38□□□□□ -1.23
ATM-223ENST00000533979 DUSP15Q9H1R2 295 aaPredicted RBP7.38□□□□□ -1.23
ATM-223ENST00000533979 EHMT1Q9H9B1 1298 aa7.38□□□□□ -1.23
ATM-223ENST00000533979 ADAMTS1Q9UHI8 967 aa7.38□□□□□ -1.23
ATM-223ENST00000533979 KCNH3Q9ULD8 1083 aa7.38□□□□□ -1.23
ATM-223ENST00000533979 E9PSI1 815 aa7.37□□□□□ -1.23
ATM-223ENST00000533979 H3BS24 57 aa7.37□□□□□ -1.23
ATM-223ENST00000533979 PAPLNO95428 1278 aa7.37□□□□□ -1.23
ATM-223ENST00000533979 TMPRSS7Q7RTY8 843 aa7.37□□□□□ -1.23
ATM-223ENST00000533979 REXO1Q8N1G1 1221 aaKnown RBP7.37□□□□□ -1.23
ATM-223ENST00000533979 LRRN4CLQ8ND94 238 aa7.37□□□□□ -1.23
ATM-223ENST00000533979 Q96M66 194 aa7.37□□□□□ -1.23
ATM-223ENST00000533979 NT5C1AQ9BXI3 368 aa7.37□□□□□ -1.23
ATM-223ENST00000533979 BRMS1Q9HCU9 246 aa7.37□□□□□ -1.23
ATM-223ENST00000533979 TLR3O15455 904 aaKnown RBP7.36□□□□□ -1.23
ATM-223ENST00000533979 SRFP11831 508 aa7.36□□□□□ -1.23
ATM-223ENST00000533979 FLAD1Q8NFF5 587 aa7.36□□□□□ -1.23
ATM-223ENST00000533979 RNF141Q8WVD5 230 aa7.36□□□□□ -1.23
ATM-223ENST00000533979 GPR62Q9BZJ7 368 aa7.36□□□□□ -1.23
ATM-223ENST00000533979 TRIT1Q9H3H1 467 aaKnown RBP7.36□□□□□ -1.23
ATM-223ENST00000533979 METTL5Q9NRN9 209 aaKnown RBP7.36□□□□□ -1.23
ATM-223ENST00000533979 KRTAP9-6A0A140TA67 174 aa7.35□□□□□ -1.23
ATM-223ENST00000533979 RGS13O14921 159 aa7.35□□□□□ -1.23
ATM-223ENST00000533979 SLITRK4Q8IW52 837 aa7.35□□□□□ -1.23
ATM-223ENST00000533979 BAHD1Q8TBE0 780 aaPredicted RBP7.35□□□□□ -1.23
ATM-223ENST00000533979 VWCEQ96DN2 955 aa7.35□□□□□ -1.23
ATM-223ENST00000533979 CCDC120Q96HB5 630 aa7.35□□□□□ -1.23
ATM-223ENST00000533979 CARS2Q9HA77 564 aaKnown RBP7.35□□□□□ -1.23
ATM-223ENST00000533979 GOLGA2P5Q9HBQ8 144 aa7.35□□□□□ -1.23
ATM-223ENST00000533979 PRDM7Q9NQW5 492 aa7.35□□□□□ -1.23
ATM-223ENST00000533979 PCDHB14Q9Y5E9 798 aa7.35□□□□□ -1.23
ATM-223ENST00000533979 CARMIL2Q6F5E8 1435 aa7.35□□□□□ -1.23
ATM-223ENST00000533979 DNAJA2O60884 412 aa7.34□□□□□ -1.23
ATM-223ENST00000533979 VAMP1P23763 118 aa7.34□□□□□ -1.23
ATM-223ENST00000533979 GBP1P32455 592 aa7.34□□□□□ -1.23
ATM-223ENST00000533979 ZNF76P36508 570 aa7.34□□□□□ -1.23
ATM-223ENST00000533979 GDNFP39905 211 aa7.34□□□□□ -1.23
ATM-223ENST00000533979 AFMP43652 599 aa7.34□□□□□ -1.23
ATM-223ENST00000533979 TNNI2P48788 182 aa7.34□□□□□ -1.23
ATM-223ENST00000533979 CDCP2Q5VXM1 449 aa7.34□□□□□ -1.23
ATM-223ENST00000533979 TMEM40Q8WWA1 233 aa7.34□□□□□ -1.23
ATM-223ENST00000533979 NKD1Q969G9 470 aa7.34□□□□□ -1.23
ATM-223ENST00000533979 KIF2CQ99661 725 aa7.34□□□□□ -1.23
ATM-223ENST00000533979 GPATCH2Q9NW75 528 aa7.34□□□□□ -1.23
ATM-223ENST00000533979 KLHL3Q9UH77 587 aa7.34□□□□□ -1.23
ATM-223ENST00000533979 CTNND2Q9UQB3 1225 aa7.34□□□□□ -1.23
ATM-223ENST00000533979 RBAK-RBAKDNI3L0D1 243 aa7.33□□□□□ -1.24
ATM-223ENST00000533979 ESR1P03372 595 aa7.33□□□□□ -1.24
ATM-223ENST00000533979 TPP2P29144 1249 aaPredicted RBP7.33□□□□□ -1.24
ATM-223ENST00000533979 CRKP46108 304 aa7.33□□□□□ -1.24
ATM-223ENST00000533979 ZNF165P49910 485 aa7.33□□□□□ -1.24
ATM-223ENST00000533979 LRRFIP1Q32MZ4 808 aaKnown RBP7.33□□□□□ -1.24
ATM-223ENST00000533979 SEZ6Q53EL9 994 aa7.33□□□□□ -1.24
ATM-223ENST00000533979 PHACTR4Q8IZ21 702 aa7.33□□□□□ -1.24
ATM-223ENST00000533979 EAF1Q96JC9 268 aaPredicted RBP7.33□□□□□ -1.24
ATM-223ENST00000533979 KREMEN1Q96MU8 473 aa7.33□□□□□ -1.24
ATM-223ENST00000533979 UBP1Q9NZI7 540 aa7.33□□□□□ -1.24
ATM-223ENST00000533979 APOBRQ0VD83 1088 aa7.32□□□□□ -1.24
ATM-223ENST00000533979 GAB4Q2WGN9 574 aa7.32□□□□□ -1.24
ATM-223ENST00000533979 DTWD2Q8NBA8 298 aa7.32□□□□□ -1.24
ATM-223ENST00000533979 KRTAP4-12Q9BQ66 201 aa7.32□□□□□ -1.24
ATM-223ENST00000533979 SPON2Q9BUD6 331 aa7.32□□□□□ -1.24
ATM-223ENST00000533979 ASPNQ9BXN1 380 aa7.32□□□□□ -1.24
ATM-223ENST00000533979 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.32□□□□□ -1.24
ATM-223ENST00000533979 GMIPQ9P107 970 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms