RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 CCNA1P78396 465 aa17.49■□□□□ 0.39
SHARPIN-208ENST00000533948 ZYXQ15942 572 aaKnown RBP17.49■□□□□ 0.39
SHARPIN-208ENST00000533948 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.49■□□□□ 0.39
SHARPIN-208ENST00000533948 FTSJ3Q8IY81 847 aaKnown RBP17.49■□□□□ 0.39
SHARPIN-208ENST00000533948 EDC3Q96F86 508 aaKnown RBP17.49■□□□□ 0.39
SHARPIN-208ENST00000533948 CYP2E1P05181 493 aaPredicted RBP17.48■□□□□ 0.39
SHARPIN-208ENST00000533948 TNNI3KQ59H18 835 aa17.48■□□□□ 0.39
SHARPIN-208ENST00000533948 RABGAP1Q9Y3P9 1069 aa17.48■□□□□ 0.39
SHARPIN-208ENST00000533948 FPGT-TNNI3KV9GXZ4 949 aa17.48■□□□□ 0.39
SHARPIN-208ENST00000533948 USP17L15C9J2P7 530 aa17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 USP17L13C9JLJ4 530 aa17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 USP17L11C9JVI0 530 aa17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 USP17L18D6R9N7 530 aa17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 USP17L22D6RA61 530 aa17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 USP17L17D6RBQ6 530 aa17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 USP17L19D6RCP7 530 aa17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 USP17L20D6RJB6 530 aa17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 POTEB2H3BUK9 544 aa17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 CYP7A1P22680 504 aa17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 ATN1P54259 1190 aaPredicted RBP17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 USP14P54578 494 aa17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 USP17L24Q0WX57 530 aa17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 MAP2K5Q13163 448 aa17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 MFSD14CQ5VZR4 134 aa17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 CERS3Q8IU89 383 aa17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 ITPRIPQ8IWB1 547 aa17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 ZNF512BQ96KM6 892 aaPredicted RBP17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 DBNDD2Q9BQY9 259 aa17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 SENP6Q9GZR1 1112 aaPredicted RBP17.47■□□□□ 0.39
SHARPIN-208ENST00000533948 SURF6O75683 361 aaKnown RBP17.46■□□□□ 0.39
SHARPIN-208ENST00000533948 GH2P01242 217 aa17.46■□□□□ 0.39
SHARPIN-208ENST00000533948 ZAP70P43403 619 aa17.46■□□□□ 0.39
SHARPIN-208ENST00000533948 USP5P45974 858 aa17.46■□□□□ 0.39
SHARPIN-208ENST00000533948 DYNLL1P63167 89 aaKnown RBP17.46■□□□□ 0.39
SHARPIN-208ENST00000533948 POLA2Q14181 598 aa17.46■□□□□ 0.39
SHARPIN-208ENST00000533948 WDR78Q5VTH9 848 aa17.46■□□□□ 0.39
SHARPIN-208ENST00000533948 FEZ1Q99689 392 aa17.46■□□□□ 0.39
SHARPIN-208ENST00000533948 C1orf115Q9H7X2 142 aa17.46■□□□□ 0.39
SHARPIN-208ENST00000533948 ATP8B2P98198 1209 aa17.45■□□□□ 0.38
SHARPIN-208ENST00000533948 ATP2B2Q01814 1243 aa17.45■□□□□ 0.38
SHARPIN-208ENST00000533948 LBHD1Q9BQE6 289 aaPredicted RBP17.45■□□□□ 0.38
SHARPIN-208ENST00000533948 CABP5Q9NP86 173 aa17.45■□□□□ 0.38
SHARPIN-208ENST00000533948 LTBP2Q14767 1821 aa17.44■□□□□ 0.38
SHARPIN-208ENST00000533948 SLC15A5A6NIM6 579 aa17.44■□□□□ 0.38
SHARPIN-208ENST00000533948 IDH1O75874 414 aaKnown RBP17.44■□□□□ 0.38
SHARPIN-208ENST00000533948 CNGA1P29973 690 aa17.44■□□□□ 0.38
SHARPIN-208ENST00000533948 RAB3GAP1Q15042 981 aa17.44■□□□□ 0.38
SHARPIN-208ENST00000533948 FAM109BQ6ICB4 259 aaPredicted RBP17.44■□□□□ 0.38
SHARPIN-208ENST00000533948 TATDN1Q6P1N9 297 aa17.44■□□□□ 0.38
SHARPIN-208ENST00000533948 CATSPERGQ6ZRH7 1159 aa17.44■□□□□ 0.38
SHARPIN-208ENST00000533948 TTC6Q86TZ1 520 aa17.44■□□□□ 0.38
SHARPIN-208ENST00000533948 TRPV1Q8NER1 839 aa17.44■□□□□ 0.38
SHARPIN-208ENST00000533948 NPLOC4Q8TAT6 608 aa17.44■□□□□ 0.38
SHARPIN-208ENST00000533948 SSH3Q8TE77 659 aa17.44■□□□□ 0.38
SHARPIN-208ENST00000533948 C12orf42Q96LP6 360 aa17.44■□□□□ 0.38
SHARPIN-208ENST00000533948 PIH1D3Q9NQM4 214 aaKnown RBP17.44■□□□□ 0.38
SHARPIN-208ENST00000533948 DDX20Q9UHI6 824 aaKnown RBP17.44■□□□□ 0.38
SHARPIN-208ENST00000533948 SERPINB13Q9UIV8 391 aa17.44■□□□□ 0.38
SHARPIN-208ENST00000533948 IVNS1ABPQ9Y6Y0 642 aa17.44■□□□□ 0.38
SHARPIN-208ENST00000533948 CDH23Q9H251 3354 aa17.43■□□□□ 0.38
SHARPIN-208ENST00000533948 MSCO60682 206 aa17.43■□□□□ 0.38
SHARPIN-208ENST00000533948 CYP2C19P33261 490 aa17.43■□□□□ 0.38
SHARPIN-208ENST00000533948 CERKLQ49MI3 558 aaPredicted RBP17.43■□□□□ 0.38
SHARPIN-208ENST00000533948 PANK1Q8TE04 598 aa17.43■□□□□ 0.38
SHARPIN-208ENST00000533948 BTBD7Q9P203 1132 aa17.43■□□□□ 0.38
SHARPIN-208ENST00000533948 MYH1P12882 1939 aa17.43■□□□□ 0.38
SHARPIN-208ENST00000533948 PRUNE2Q8WUY3 3088 aa17.42■□□□□ 0.38
SHARPIN-208ENST00000533948 PTPREP23469 700 aa17.42■□□□□ 0.38
SHARPIN-208ENST00000533948 RTP1P59025 263 aa17.42■□□□□ 0.38
SHARPIN-208ENST00000533948 ABCB5Q2M3G0 1257 aa17.42■□□□□ 0.38
SHARPIN-208ENST00000533948 MIGA1Q8NAN2 632 aa17.42■□□□□ 0.38
SHARPIN-208ENST00000533948 ACER1Q8TDN7 264 aa17.42■□□□□ 0.38
SHARPIN-208ENST00000533948 KIAA1683Q9H0B3 1180 aa17.42■□□□□ 0.38
SHARPIN-208ENST00000533948 PRKAG2Q9UGJ0 569 aa17.42■□□□□ 0.38
SHARPIN-208ENST00000533948 VCAM1P19320 739 aa17.41■□□□□ 0.38
SHARPIN-208ENST00000533948 MAP3K12Q12852 859 aa17.41■□□□□ 0.38
SHARPIN-208ENST00000533948 GRB14Q14449 540 aa17.41■□□□□ 0.38
SHARPIN-208ENST00000533948 GJC2Q5T442 439 aaPredicted RBP17.41■□□□□ 0.38
SHARPIN-208ENST00000533948 ZNF697Q5TEC3 545 aa17.41■□□□□ 0.38
SHARPIN-208ENST00000533948 ANO1Q5XXA6 986 aa17.41■□□□□ 0.38
SHARPIN-208ENST00000533948 TMED8Q6PL24 325 aaPredicted RBP17.41■□□□□ 0.38
SHARPIN-208ENST00000533948 MAGEB6Q8N7X4 407 aa17.41■□□□□ 0.38
SHARPIN-208ENST00000533948 LPAR1Q92633 364 aa17.41■□□□□ 0.38
SHARPIN-208ENST00000533948 CCDC8Q9H0W5 538 aaPredicted RBP17.41■□□□□ 0.38
SHARPIN-208ENST00000533948 EHD4Q9H223 541 aa17.41■□□□□ 0.38
SHARPIN-208ENST00000533948 ATP11BQ9Y2G3 1177 aa17.41■□□□□ 0.38
SHARPIN-208ENST00000533948 DNM1LO00429 736 aa17.4■□□□□ 0.38
SHARPIN-208ENST00000533948 HOXC6P09630 235 aa17.4■□□□□ 0.38
SHARPIN-208ENST00000533948 SHHQ15465 462 aa17.4■□□□□ 0.38
SHARPIN-208ENST00000533948 C9orf50Q5SZB4 431 aa17.4■□□□□ 0.38
SHARPIN-208ENST00000533948 LBX2Q6XYB7 198 aa17.4■□□□□ 0.38
SHARPIN-208ENST00000533948 DPP9Q86TI2 863 aa17.4■□□□□ 0.38
SHARPIN-208ENST00000533948 HOXC10Q9NYD6 342 aa17.4■□□□□ 0.38
SHARPIN-208ENST00000533948 TLR7Q9NYK1 1049 aaKnown RBP17.4■□□□□ 0.38
SHARPIN-208ENST00000533948 NOP58Q9Y2X3 529 aaKnown RBP17.4■□□□□ 0.38
SHARPIN-208ENST00000533948 RLFQ13129 1914 aa17.4■□□□□ 0.38
SHARPIN-208ENST00000533948 SPTBN5Q9NRC6 3674 aaKnown RBP17.4■□□□□ 0.38
SHARPIN-208ENST00000533948 SPDYE16A6NNV3 312 aaPredicted RBP17.39■□□□□ 0.37
SHARPIN-208ENST00000533948 IGHA2P01877 340 aa17.39■□□□□ 0.37
SHARPIN-208ENST00000533948 POLR3DP05423 398 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms