RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 LINS1Q8NG48 757 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 XAGE3Q8WTP9 111 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 CEP63Q96MT8 703 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 CNTN3Q9P232 1028 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 ASAP1Q9ULH1 1129 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 MAP3K2Q9Y2U5 619 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 KAT6BQ8WYB5 2073 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 NUP98P52948 1817 aa7.04□□□□□ -1.28
CHKA-208ENST00000533910 SCN7AQ01118 1682 aa7.04□□□□□ -1.28
CHKA-208ENST00000533910 CPNE3O75131 537 aaKnown RBP7.04□□□□□ -1.28
CHKA-208ENST00000533910 UBTFL1P0CB47 393 aaPredicted RBP7.04□□□□□ -1.28
CHKA-208ENST00000533910 TYRO3Q06418 890 aa7.04□□□□□ -1.28
CHKA-208ENST00000533910 MTX1Q13505 466 aa7.04□□□□□ -1.28
CHKA-208ENST00000533910 GRIN2CQ14957 1233 aa7.04□□□□□ -1.28
CHKA-208ENST00000533910 IER5Q5VY09 327 aa7.04□□□□□ -1.28
CHKA-208ENST00000533910 COPS6Q7L5N1 327 aa7.04□□□□□ -1.28
CHKA-208ENST00000533910 VWA5B2Q8N398 1253 aa7.04□□□□□ -1.28
CHKA-208ENST00000533910 METTL22Q9BUU2 404 aaPredicted RBP7.04□□□□□ -1.28
CHKA-208ENST00000533910 TEX13AQ9BXU3 409 aaPredicted RBP7.04□□□□□ -1.28
CHKA-208ENST00000533910 ELP3Q9H9T3 547 aa7.04□□□□□ -1.28
CHKA-208ENST00000533910 ANKIB1Q9P2G1 1089 aa7.04□□□□□ -1.28
CHKA-208ENST00000533910 USP21Q9UK80 565 aa7.04□□□□□ -1.28
CHKA-208ENST00000533910 LRRFIP2Q9Y608 721 aaKnown RBP7.04□□□□□ -1.28
CHKA-208ENST00000533910 MYH14Q7Z406 1995 aaKnown RBP7.04□□□□□ -1.28
CHKA-208ENST00000533910 BRWD3Q6RI45 1802 aa7.04□□□□□ -1.28
CHKA-208ENST00000533910 TAF1LQ8IZX4 1826 aa7.04□□□□□ -1.28
CHKA-208ENST00000533910 LAMB2P55268 1798 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 A0A1B0GTH6 734 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 NEURL1BA8MQ27 555 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 SCAMP3O14828 347 aaKnown RBP7.03□□□□□ -1.28
CHKA-208ENST00000533910 IGKV5-2P06315 115 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 NBPF7P0C2Y1 421 aaPredicted RBP7.03□□□□□ -1.28
CHKA-208ENST00000533910 MYL6BP14649 208 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 GNA15P30679 374 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 ATP8B2P98198 1209 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 KRT25Q7Z3Z0 450 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 METTL16Q86W50 562 aaKnown RBP7.03□□□□□ -1.28
CHKA-208ENST00000533910 SVOPQ8N4V2 548 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 C1orf127Q8N9H9 656 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 PLBD2Q8NHP8 589 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 SSH3Q8TE77 659 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 CCDC74AQ96AQ1 378 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 OSBPL7Q9BZF2 842 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 CHRDQ9H2X0 955 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 ZFYVE28Q9HCC9 887 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 FAM13BQ9NYF5 915 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 GJA3Q9Y6H8 435 aa7.03□□□□□ -1.28
CHKA-208ENST00000533910 AFF2P51816 1311 aa7.02□□□□□ -1.28
CHKA-208ENST00000533910 MYH3P11055 1940 aa7.02□□□□□ -1.29
CHKA-208ENST00000533910 PNMA6EA0A0J9YXQ4 647 aa7.02□□□□□ -1.29
CHKA-208ENST00000533910 GRM8O00222 908 aa7.02□□□□□ -1.29
CHKA-208ENST00000533910 EREGO14944 169 aa7.02□□□□□ -1.29
CHKA-208ENST00000533910 XYLBO75191 536 aa7.02□□□□□ -1.29
CHKA-208ENST00000533910 A1BGP04217 495 aa7.02□□□□□ -1.29
CHKA-208ENST00000533910 CYP2E1P05181 493 aaPredicted RBP7.02□□□□□ -1.29
CHKA-208ENST00000533910 THBS1P07996 1170 aa7.02□□□□□ -1.29
CHKA-208ENST00000533910 PIP4K2AP48426 406 aaPredicted RBP7.02□□□□□ -1.29
CHKA-208ENST00000533910 FANCCQ00597 558 aa7.02□□□□□ -1.29
CHKA-208ENST00000533910 RAD51AP2Q09MP3 1159 aa7.02□□□□□ -1.29
CHKA-208ENST00000533910 NEXNQ0ZGT2 675 aa7.02□□□□□ -1.29
CHKA-208ENST00000533910 AIMP1Q12904 312 aaKnown RBP7.02□□□□□ -1.29
CHKA-208ENST00000533910 HIF1AQ16665 826 aa7.02□□□□□ -1.29
CHKA-208ENST00000533910 CWF19L2Q2TBE0 894 aaKnown RBP7.02□□□□□ -1.29
CHKA-208ENST00000533910 NT5DC4Q86YG4 428 aa7.02□□□□□ -1.29
CHKA-208ENST00000533910 DNAJC10Q8IXB1 793 aa7.02□□□□□ -1.29
CHKA-208ENST00000533910 LNPKQ9C0E8 428 aa7.02□□□□□ -1.29
CHKA-208ENST00000533910 HDAC5Q9UQL6 1122 aa7.02□□□□□ -1.29
CHKA-208ENST00000533910 AK5Q9Y6K8 562 aa7.02□□□□□ -1.29
CHKA-208ENST00000533910 PALLDQ8WX93 1383 aa7.02□□□□□ -1.29
CHKA-208ENST00000533910 PHACTR2O75167 634 aa7.01□□□□□ -1.29
CHKA-208ENST00000533910 SASH3O75995 380 aa7.01□□□□□ -1.29
CHKA-208ENST00000533910 STARD3NLO95772 234 aa7.01□□□□□ -1.29
CHKA-208ENST00000533910 SLURP2P0DP57 97 aa7.01□□□□□ -1.29
CHKA-208ENST00000533910 CYP19A1P11511 503 aaPredicted RBP7.01□□□□□ -1.29
CHKA-208ENST00000533910 SFSWAPQ12872 951 aaKnown RBP7.01□□□□□ -1.29
CHKA-208ENST00000533910 GCKRQ14397 625 aa7.01□□□□□ -1.29
CHKA-208ENST00000533910 NAALADL2Q58DX5 795 aa7.01□□□□□ -1.29
CHKA-208ENST00000533910 WDR44Q5JSH3 913 aa7.01□□□□□ -1.29
CHKA-208ENST00000533910 RNFT1Q5M7Z0 435 aa7.01□□□□□ -1.29
CHKA-208ENST00000533910 ANKRD45Q5TZF3 282 aa7.01□□□□□ -1.29
CHKA-208ENST00000533910 MEX3CQ5U5Q3 659 aaKnown RBP7.01□□□□□ -1.29
CHKA-208ENST00000533910 KAZALD1Q96I82 304 aa7.01□□□□□ -1.29
CHKA-208ENST00000533910 MYD88Q99836 296 aa7.01□□□□□ -1.29
CHKA-208ENST00000533910 NPHS2Q9NP85 383 aa7.01□□□□□ -1.29
CHKA-208ENST00000533910 BRD7Q9NPI1 651 aa7.01□□□□□ -1.29
CHKA-208ENST00000533910 PPP1R1BQ9UD71 204 aaPredicted RBP7.01□□□□□ -1.29
CHKA-208ENST00000533910 SALL3Q9BXA9 1300 aa7.01□□□□□ -1.29
CHKA-208ENST00000533910 AK9Q5TCS8 1911 aa7□□□□□ -1.29
CHKA-208ENST00000533910 F11P03951 625 aa7□□□□□ -1.29
CHKA-208ENST00000533910 CASP7P55210 303 aa7□□□□□ -1.29
CHKA-208ENST00000533910 BMP2KLQ5H9B9 411 aa7□□□□□ -1.29
CHKA-208ENST00000533910 ZNF385CQ66K41 422 aaPredicted RBP7□□□□□ -1.29
CHKA-208ENST00000533910 XKR5Q6UX68 686 aa7□□□□□ -1.29
CHKA-208ENST00000533910 TTLL7Q6ZT98 887 aa7□□□□□ -1.29
CHKA-208ENST00000533910 PPP1R42Q7Z4L9 355 aa7□□□□□ -1.29
CHKA-208ENST00000533910 FAM177A1Q8N128 213 aaPredicted RBP7□□□□□ -1.29
CHKA-208ENST00000533910 TMEM151AQ8N4L1 468 aa7□□□□□ -1.29
CHKA-208ENST00000533910 SMARCC1Q92922 1105 aaPredicted RBP7□□□□□ -1.29
CHKA-208ENST00000533910 SYTL4Q96C24 671 aaPredicted RBP7□□□□□ -1.29
CHKA-208ENST00000533910 SUCLG2Q96I99 432 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms