RNA–Protein interactions for RNA: ENST00000533619.5

FGFR1-239, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-239ENST00000533619 GPAT2Q6NUI2 795 aa20.34■□□□□ 0.85
FGFR1-239ENST00000533619 SKAP1Q86WV1 359 aa20.34■□□□□ 0.85
FGFR1-239ENST00000533619 STK11IPQ8N1F8 1099 aa20.34■□□□□ 0.85
FGFR1-239ENST00000533619 KANSL2Q9H9L4 492 aa20.34■□□□□ 0.85
FGFR1-239ENST00000533619 CTNNA3Q9UI47 895 aa20.34■□□□□ 0.85
FGFR1-239ENST00000533619 HMGCS2P54868 508 aa20.33■□□□□ 0.85
FGFR1-239ENST00000533619 CRHR2Q13324 411 aa20.33■□□□□ 0.85
FGFR1-239ENST00000533619 MTMR2Q13614 643 aa20.33■□□□□ 0.85
FGFR1-239ENST00000533619 USP17L2Q6R6M4 530 aa20.33■□□□□ 0.85
FGFR1-239ENST00000533619 FEZ1Q99689 392 aa20.33■□□□□ 0.85
FGFR1-239ENST00000533619 KIAA1683Q9H0B3 1180 aa20.33■□□□□ 0.85
FGFR1-239ENST00000533619 SH2D4AQ9H788 454 aa20.33■□□□□ 0.85
FGFR1-239ENST00000533619 ARHGEF10LQ9HCE6 1279 aa20.33■□□□□ 0.85
FGFR1-239ENST00000533619 AGTPBP1Q9UPW5 1226 aa20.33■□□□□ 0.85
FGFR1-239ENST00000533619 GPR25O00155 361 aa20.32■□□□□ 0.84
FGFR1-239ENST00000533619 ZNF213O14771 459 aa20.32■□□□□ 0.84
FGFR1-239ENST00000533619 SGSM2O43147 1006 aa20.32■□□□□ 0.84
FGFR1-239ENST00000533619 PCP11498 1178 aaKnown RBP20.32■□□□□ 0.84
FGFR1-239ENST00000533619 CASC1Q6TDU7 716 aa20.32■□□□□ 0.84
FGFR1-239ENST00000533619 PNMA3Q9UL41 463 aa20.32■□□□□ 0.84
FGFR1-239ENST00000533619 ICA1Q05084 483 aa20.31■□□□□ 0.84
FGFR1-239ENST00000533619 CTDSPL2Q05D32 466 aa20.31■□□□□ 0.84
FGFR1-239ENST00000533619 PARK7Q99497 189 aaKnown RBP20.31■□□□□ 0.84
FGFR1-239ENST00000533619 CASP8AP2Q9UKL3 1982 aa20.3■□□□□ 0.84
FGFR1-239ENST00000533619 TLR2O60603 784 aa20.3■□□□□ 0.84
FGFR1-239ENST00000533619 PRDM1O75626 825 aa20.3■□□□□ 0.84
FGFR1-239ENST00000533619 FGRP09769 529 aa20.3■□□□□ 0.84
FGFR1-239ENST00000533619 TSPY3P0CV98 308 aa20.3■□□□□ 0.84
FGFR1-239ENST00000533619 TSPY8P0CW00 308 aa20.3■□□□□ 0.84
FGFR1-239ENST00000533619 OSBPP22059 807 aa20.3■□□□□ 0.84
FGFR1-239ENST00000533619 NT5C2P49902 561 aa20.3■□□□□ 0.84
FGFR1-239ENST00000533619 IMMTQ16891 758 aaKnown RBP20.3■□□□□ 0.84
FGFR1-239ENST00000533619 PPP4R3BQ5MIZ7 849 aa20.3■□□□□ 0.84
FGFR1-239ENST00000533619 KIAA1211Q6ZU35 1233 aa20.3■□□□□ 0.84
FGFR1-239ENST00000533619 ACER1Q8TDN7 264 aa20.3■□□□□ 0.84
FGFR1-239ENST00000533619 C12orf42Q96LP6 360 aa20.3■□□□□ 0.84
FGFR1-239ENST00000533619 RNF41Q9H4P4 317 aaPredicted RBP20.3■□□□□ 0.84
FGFR1-239ENST00000533619 LOC285556D6RIA3 1793 aa20.3■□□□□ 0.84
FGFR1-239ENST00000533619 ORC4O43929 436 aa20.29■□□□□ 0.84
FGFR1-239ENST00000533619 FKTNO75072 461 aa20.29■□□□□ 0.84
FGFR1-239ENST00000533619 HOXA7P31268 230 aaPredicted RBP20.29■□□□□ 0.84
FGFR1-239ENST00000533619 MFSD6Q6ZSS7 791 aa20.29■□□□□ 0.84
FGFR1-239ENST00000533619 NEDD1Q8NHV4 660 aa20.29■□□□□ 0.84
FGFR1-239ENST00000533619 IL25Q9H293 177 aa20.29■□□□□ 0.84
FGFR1-239ENST00000533619 R3HDMLQ9H3Y0 253 aa20.29■□□□□ 0.84
FGFR1-239ENST00000533619 EMILIN3Q9NT22 766 aa20.29■□□□□ 0.84
FGFR1-239ENST00000533619 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.29■□□□□ 0.84
FGFR1-239ENST00000533619 TMX2Q9Y320 296 aa20.29■□□□□ 0.84
FGFR1-239ENST00000533619 CDC45O75419 566 aa20.28■□□□□ 0.84
FGFR1-239ENST00000533619 HAND2P61296 217 aa20.28■□□□□ 0.84
FGFR1-239ENST00000533619 TFAP4Q01664 338 aa20.28■□□□□ 0.84
FGFR1-239ENST00000533619 AKNAD1Q5T1N1 836 aa20.28■□□□□ 0.84
FGFR1-239ENST00000533619 TREML2Q5T2D2 321 aa20.28■□□□□ 0.84
FGFR1-239ENST00000533619 ZNF296Q8WUU4 475 aaPredicted RBP20.28■□□□□ 0.84
FGFR1-239ENST00000533619 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.28■□□□□ 0.84
FGFR1-239ENST00000533619 TOMM22Q9NS69 142 aa20.28■□□□□ 0.84
FGFR1-239ENST00000533619 NYAP2Q9P242 653 aa20.28■□□□□ 0.84
FGFR1-239ENST00000533619 GREB1LQ9C091 1923 aaPredicted RBP20.27■□□□□ 0.84
FGFR1-239ENST00000533619 A0A1W2PRG0 241 aa20.27■□□□□ 0.84
FGFR1-239ENST00000533619 TSPY2A6NKD2 308 aa20.27■□□□□ 0.84
FGFR1-239ENST00000533619 RANBP6O60518 1105 aaKnown RBP20.27■□□□□ 0.84
FGFR1-239ENST00000533619 EEF2P13639 858 aaKnown RBP20.27■□□□□ 0.84
FGFR1-239ENST00000533619 ATP2B2Q01814 1243 aa20.27■□□□□ 0.84
FGFR1-239ENST00000533619 SP3Q02447 781 aa20.27■□□□□ 0.84
FGFR1-239ENST00000533619 ZYXQ15942 572 aaKnown RBP20.27■□□□□ 0.84
FGFR1-239ENST00000533619 SIAH1Q8IUQ4 282 aa20.27■□□□□ 0.84
FGFR1-239ENST00000533619 SMCR8Q8TEV9 937 aaPredicted RBP20.27■□□□□ 0.84
FGFR1-239ENST00000533619 LPAR1Q92633 364 aa20.27■□□□□ 0.84
FGFR1-239ENST00000533619 ESYT1Q9BSJ8 1104 aa20.27■□□□□ 0.84
FGFR1-239ENST00000533619 U3KPZ7 1027 aaPredicted RBP20.27■□□□□ 0.84
FGFR1-239ENST00000533619 ARHGEF6Q15052 776 aa20.26■□□□□ 0.83
FGFR1-239ENST00000533619 STAG1Q8WVM7 1258 aa20.26■□□□□ 0.83
FGFR1-239ENST00000533619 LAMA4Q16363 1823 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 PLIN4Q96Q06 1357 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 IGKV6D-41A0A0C4DH26 115 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 USP17L15C9J2P7 530 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 USP17L13C9JLJ4 530 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 USP17L11C9JVI0 530 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 USP17L18D6R9N7 530 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 USP17L22D6RA61 530 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 USP17L17D6RBQ6 530 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 USP17L19D6RCP7 530 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 USP17L20D6RJB6 530 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 CYP2C8P10632 490 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 GCLCP48506 637 aaPredicted RBP20.25■□□□□ 0.83
FGFR1-239ENST00000533619 IRX3P78415 501 aaPredicted RBP20.25■□□□□ 0.83
FGFR1-239ENST00000533619 USP17L24Q0WX57 530 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 DGKZQ13574 1117 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 FAM47AQ5JRC9 791 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 RRP12Q5JTH9 1297 aaKnown RBP20.25■□□□□ 0.83
FGFR1-239ENST00000533619 C17orf99Q6UX52 265 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 MAP4K1Q92918 833 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 MKL1Q969V6 931 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 ERO1AQ96HE7 468 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 ASCC2Q9H1I8 757 aaPredicted RBP20.25■□□□□ 0.83
FGFR1-239ENST00000533619 VCPKMTQ9H867 229 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 GOPCQ9HD26 462 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 INCENPQ9NQS7 918 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 MTMR4Q9NYA4 1195 aa20.25■□□□□ 0.83
FGFR1-239ENST00000533619 SYNPO2Q9UMS6 1093 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms