RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-223ENST00000533299 IMPDH2P12268 514 aa5.33□□□□□ -1.56
LMO7-223ENST00000533299 HCLS1P14317 486 aaPredicted RBP5.33□□□□□ -1.56
LMO7-223ENST00000533299 RING1Q06587 406 aa5.33□□□□□ -1.56
LMO7-223ENST00000533299 ZBTB37Q5TC79 503 aa5.33□□□□□ -1.56
LMO7-223ENST00000533299 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.33□□□□□ -1.56
LMO7-223ENST00000533299 FBLIM1Q8WUP2 373 aa5.33□□□□□ -1.56
LMO7-223ENST00000533299 SEC16BQ96JE7 1060 aa5.33□□□□□ -1.56
LMO7-223ENST00000533299 ADAM30Q9UKF2 790 aa5.33□□□□□ -1.56
LMO7-223ENST00000533299 PGRP06401 933 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 PLCG1P19174 1290 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 GRK4P32298 578 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 NFKBIBQ15653 356 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 LRRFIP1Q32MZ4 808 aaKnown RBP5.32□□□□□ -1.56
LMO7-223ENST00000533299 SGO2Q562F6 1265 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 HID1Q8IV36 788 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 SLC43A3Q8NBI5 491 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 FBXO27Q8NI29 283 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 EZH1Q92800 747 aaPredicted RBP5.32□□□□□ -1.56
LMO7-223ENST00000533299 RELTQ969Z4 430 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 ACSS3Q9H6R3 686 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 BRMS1Q9HCU9 246 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 DAGLAQ9Y4D2 1042 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 LRRC10BA6NIK2 292 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 ARID5AQ03989 594 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 NAALADL2Q58DX5 795 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 CDPF1Q6NVV7 123 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 FERD3LQ96RJ6 166 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 CRBNQ96SW2 442 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 STRIP2Q9ULQ0 834 aa5.32□□□□□ -1.56
LMO7-223ENST00000533299 PRR36Q9H6K5 1346 aa5.31□□□□□ -1.56
LMO7-223ENST00000533299 GRIN3BO60391 1043 aa5.31□□□□□ -1.56
LMO7-223ENST00000533299 NFICP08651 508 aa5.31□□□□□ -1.56
LMO7-223ENST00000533299 CRKP46108 304 aa5.31□□□□□ -1.56
LMO7-223ENST00000533299 TNNI2P48788 182 aa5.31□□□□□ -1.56
LMO7-223ENST00000533299 CDK8P49336 464 aa5.31□□□□□ -1.56
LMO7-223ENST00000533299 YARSP54577 528 aaKnown RBP5.31□□□□□ -1.56
LMO7-223ENST00000533299 SLC6A19Q695T7 634 aa5.31□□□□□ -1.56
LMO7-223ENST00000533299 GK5Q6ZS86 529 aa5.31□□□□□ -1.56
LMO7-223ENST00000533299 BCL7CQ8WUZ0 217 aaPredicted RBP5.31□□□□□ -1.56
LMO7-223ENST00000533299 CPLX3Q8WVH0 158 aa5.31□□□□□ -1.56
LMO7-223ENST00000533299 ISL2Q96A47 359 aa5.31□□□□□ -1.56
LMO7-223ENST00000533299 SEMA6CQ9H3T2 930 aa5.31□□□□□ -1.56
LMO7-223ENST00000533299 EFR3BQ9Y2G0 817 aa5.31□□□□□ -1.56
LMO7-223ENST00000533299 PCDHB14Q9Y5E9 798 aa5.31□□□□□ -1.56
LMO7-223ENST00000533299 ATE1O95260 518 aa5.3□□□□□ -1.56
LMO7-223ENST00000533299 HTR3BO95264 441 aa5.3□□□□□ -1.56
LMO7-223ENST00000533299 EHMT1Q9H9B1 1298 aa5.3□□□□□ -1.56
LMO7-223ENST00000533299 RC3H2Q9HBD1 1191 aaKnown RBP5.3□□□□□ -1.56
LMO7-223ENST00000533299 NEFMP07197 916 aa5.3□□□□□ -1.56
LMO7-223ENST00000533299 ATF4P18848 351 aaPredicted RBP5.3□□□□□ -1.56
LMO7-223ENST00000533299 CAP2P40123 477 aa5.3□□□□□ -1.56
LMO7-223ENST00000533299 SOX9P48436 509 aa5.3□□□□□ -1.56
LMO7-223ENST00000533299 SF3A1Q15459 793 aaKnown RBP5.3□□□□□ -1.56
LMO7-223ENST00000533299 TMEM201Q5SNT2 666 aa5.3□□□□□ -1.56
LMO7-223ENST00000533299 FBXW10Q5XX13 1052 aa5.3□□□□□ -1.56
LMO7-223ENST00000533299 MFSD2AQ8NA29 543 aa5.3□□□□□ -1.56
LMO7-223ENST00000533299 TINF2Q9BSI4 451 aa5.3□□□□□ -1.56
LMO7-223ENST00000533299 GINM1Q9NU53 330 aa5.3□□□□□ -1.56
LMO7-223ENST00000533299 REV1Q9UBZ9 1251 aa5.3□□□□□ -1.56
LMO7-223ENST00000533299 LRIG2O94898 1065 aa5.29□□□□□ -1.56
LMO7-223ENST00000533299 SSBP05455 408 aaKnown RBP eCLIP5.29□□□□□ -1.56
LMO7-223ENST00000533299 DNAJA1P31689 397 aaKnown RBP5.29□□□□□ -1.56
LMO7-223ENST00000533299 NASPP49321 788 aaPredicted RBP5.29□□□□□ -1.56
LMO7-223ENST00000533299 CYP27A1Q02318 531 aa5.29□□□□□ -1.56
LMO7-223ENST00000533299 MCATQ8IVS2 390 aaKnown RBP5.29□□□□□ -1.56
LMO7-223ENST00000533299 MRPL41Q8IXM3 137 aaKnown RBP5.29□□□□□ -1.56
LMO7-223ENST00000533299 TMEM87BQ96K49 555 aa5.29□□□□□ -1.56
LMO7-223ENST00000533299 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.29□□□□□ -1.56
LMO7-223ENST00000533299 FOXQ1Q9C009 403 aa5.29□□□□□ -1.56
LMO7-223ENST00000533299 ZC3H7BQ9UGR2 993 aaKnown RBP5.29□□□□□ -1.56
LMO7-223ENST00000533299 POLR3KQ9Y2Y1 108 aaPredicted RBP5.29□□□□□ -1.56
LMO7-223ENST00000533299 HOXA5P20719 270 aa5.28□□□□□ -1.56
LMO7-223ENST00000533299 CHMP4BP1P59074 171 aa5.28□□□□□ -1.56
LMO7-223ENST00000533299 WFDC3Q8IUB2 231 aa5.28□□□□□ -1.56
LMO7-223ENST00000533299 FAM13CQ8NE31 585 aa5.28□□□□□ -1.56
LMO7-223ENST00000533299 OR6P1Q8NGX9 317 aa5.28□□□□□ -1.56
LMO7-223ENST00000533299 TBC1D32Q96NH3 1257 aa5.28□□□□□ -1.56
LMO7-223ENST00000533299 SRRTQ9BXP5 876 aaKnown RBP5.28□□□□□ -1.56
LMO7-223ENST00000533299 GMIPQ9P107 970 aa5.28□□□□□ -1.56
LMO7-223ENST00000533299 CORINQ9Y5Q5 1042 aa5.28□□□□□ -1.56
LMO7-223ENST00000533299 FUT4P22083 530 aa5.27□□□□□ -1.57
LMO7-223ENST00000533299 NTF4P34130 210 aa5.27□□□□□ -1.57
LMO7-223ENST00000533299 EIF6P56537 245 aaKnown RBP5.27□□□□□ -1.57
LMO7-223ENST00000533299 CLCQ05315 142 aa5.27□□□□□ -1.57
LMO7-223ENST00000533299 CYP27C1Q4G0S4 372 aa5.27□□□□□ -1.57
LMO7-223ENST00000533299 ZAR1Q86SH2 424 aa5.27□□□□□ -1.57
LMO7-223ENST00000533299 MISP3Q96FF7 219 aa5.27□□□□□ -1.57
LMO7-223ENST00000533299 GMLQ99445 158 aa5.27□□□□□ -1.57
LMO7-223ENST00000533299 LGR6Q9HBX8 967 aa5.27□□□□□ -1.57
LMO7-223ENST00000533299 KLHL3Q9UH77 587 aa5.27□□□□□ -1.57
LMO7-223ENST00000533299 ZNRF3Q9ULT6 936 aa5.27□□□□□ -1.57
LMO7-223ENST00000533299 CST3P01034 146 aaPredicted RBP5.27□□□□□ -1.57
LMO7-223ENST00000533299 DUSP27Q5VZP5 1158 aa5.27□□□□□ -1.57
LMO7-223ENST00000533299 ZNF746Q6NUN9 644 aaPredicted RBP5.27□□□□□ -1.57
LMO7-223ENST00000533299 SLFN12Q8IYM2 578 aa5.27□□□□□ -1.57
LMO7-223ENST00000533299 ACSF2Q96CM8 615 aaPredicted RBP5.27□□□□□ -1.57
LMO7-223ENST00000533299 BORCS6Q96GS4 357 aa5.27□□□□□ -1.57
LMO7-223ENST00000533299 TANGO6Q9C0B7 1094 aa5.27□□□□□ -1.57
LMO7-223ENST00000533299 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.27□□□□□ -1.57
LMO7-223ENST00000533299 TJP2Q9UDY2 1190 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms