RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 USP17L17D6RBQ6 530 aa27.73■■■□□ 2.03
PKP3-210ENST00000533249 USP17L19D6RCP7 530 aa27.73■■■□□ 2.03
PKP3-210ENST00000533249 USP17L20D6RJB6 530 aa27.73■■■□□ 2.03
PKP3-210ENST00000533249 POLR3DP05423 398 aaPredicted RBP27.73■■■□□ 2.03
PKP3-210ENST00000533249 XRCC5P13010 732 aaKnown RBP27.73■■■□□ 2.03
PKP3-210ENST00000533249 ZKSCAN1P17029 563 aaPredicted RBP27.73■■■□□ 2.03
PKP3-210ENST00000533249 USP17L24Q0WX57 530 aa27.73■■■□□ 2.03
PKP3-210ENST00000533249 SLC9C2Q5TAH2 1124 aa27.73■■■□□ 2.03
PKP3-210ENST00000533249 CLASRPQ8N2M8 674 aaKnown RBP27.73■■■□□ 2.03
PKP3-210ENST00000533249 ACER1Q8TDN7 264 aa27.73■■■□□ 2.03
PKP3-210ENST00000533249 DNAJC2Q99543 621 aaKnown RBP27.73■■■□□ 2.03
PKP3-210ENST00000533249 CABP5Q9NP86 173 aa27.73■■■□□ 2.03
PKP3-210ENST00000533249 NAV1Q8NEY1 1877 aa27.72■■■□□ 2.03
PKP3-210ENST00000533249 PDE6AP16499 860 aa27.72■■■□□ 2.03
PKP3-210ENST00000533249 SHMT1P34896 483 aa27.72■■■□□ 2.03
PKP3-210ENST00000533249 USP14P54578 494 aa27.72■■■□□ 2.03
PKP3-210ENST00000533249 MAP3K21Q5TCX8 1036 aa27.72■■■□□ 2.03
PKP3-210ENST00000533249 PLEKHH3Q7Z736 793 aa27.72■■■□□ 2.03
PKP3-210ENST00000533249 DDX60LQ5H9U9 1706 aaKnown RBP27.72■■■□□ 2.03
PKP3-210ENST00000533249 GOLIM4O00461 696 aa27.71■■■□□ 2.03
PKP3-210ENST00000533249 MS4A1P11836 297 aa27.71■■■□□ 2.03
PKP3-210ENST00000533249 RANBP2P49792 3224 aaKnown RBP27.71■■■□□ 2.03
PKP3-210ENST00000533249 CCL14Q16627 93 aa27.71■■■□□ 2.03
PKP3-210ENST00000533249 C7orf61Q8IZ16 206 aa27.71■■■□□ 2.03
PKP3-210ENST00000533249 USP6NLQ92738 828 aa27.71■■■□□ 2.03
PKP3-210ENST00000533249 KIF1BPQ96EK5 621 aa27.71■■■□□ 2.03
PKP3-210ENST00000533249 CRNKL1Q9BZJ0 848 aaKnown RBP27.71■■■□□ 2.03
PKP3-210ENST00000533249 NBPF3Q9H094 633 aa27.71■■■□□ 2.03
PKP3-210ENST00000533249 KIAA1683Q9H0B3 1180 aa27.71■■■□□ 2.03
PKP3-210ENST00000533249 RABGAP1Q9Y3P9 1069 aa27.71■■■□□ 2.03
PKP3-210ENST00000533249 IFIT2P09913 472 aaKnown RBP27.7■■■□□ 2.02
PKP3-210ENST00000533249 VCAM1P19320 739 aa27.7■■■□□ 2.02
PKP3-210ENST00000533249 RGS2P41220 211 aa27.7■■■□□ 2.02
PKP3-210ENST00000533249 MORN1Q5T089 497 aa27.7■■■□□ 2.02
PKP3-210ENST00000533249 TRMT44Q8IYL2 757 aaKnown RBP27.7■■■□□ 2.02
PKP3-210ENST00000533249 YTHDC1Q96MU7 727 aaKnown RBP27.7■■■□□ 2.02
PKP3-210ENST00000533249 STAP2Q9UGK3 403 aa27.7■■■□□ 2.02
PKP3-210ENST00000533249 OGDHLQ9ULD0 1010 aa27.7■■■□□ 2.02
PKP3-210ENST00000533249 ZNF532Q9HCE3 1301 aa27.69■■■□□ 2.02
PKP3-210ENST00000533249 CNMDO75829 334 aa27.69■■■□□ 2.02
PKP3-210ENST00000533249 MNX1P50219 401 aaPredicted RBP27.69■■■□□ 2.02
PKP3-210ENST00000533249 EVX2Q03828 476 aa27.69■■■□□ 2.02
PKP3-210ENST00000533249 CACNB2Q08289 660 aaPredicted RBP27.69■■■□□ 2.02
PKP3-210ENST00000533249 WDR78Q5VTH9 848 aa27.69■■■□□ 2.02
PKP3-210ENST00000533249 CATSPERGQ6ZRH7 1159 aa27.69■■■□□ 2.02
PKP3-210ENST00000533249 RPAP2Q8IXW5 612 aaPredicted RBP27.69■■■□□ 2.02
PKP3-210ENST00000533249 C11orf49Q9H6J7 331 aa27.69■■■□□ 2.02
PKP3-210ENST00000533249 MCM9Q9NXL9 1143 aa27.69■■■□□ 2.02
PKP3-210ENST00000533249 COG6Q9Y2V7 657 aa27.69■■■□□ 2.02
PKP3-210ENST00000533249 HMMRO75330 724 aa27.68■■■□□ 2.02
PKP3-210ENST00000533249 CCNA1P78396 465 aa27.68■■■□□ 2.02
PKP3-210ENST00000533249 SEPT2Q15019 361 aa27.68■■■□□ 2.02
PKP3-210ENST00000533249 EDC3Q96F86 508 aaKnown RBP27.68■■■□□ 2.02
PKP3-210ENST00000533249 APBA2Q99767 749 aa27.68■■■□□ 2.02
PKP3-210ENST00000533249 MPHOSPH10O00566 681 aaKnown RBP27.67■■■□□ 2.02
PKP3-210ENST00000533249 GUCY1A2P33402 732 aa27.67■■■□□ 2.02
PKP3-210ENST00000533249 SIRT2Q8IXJ6 389 aa27.67■■■□□ 2.02
PKP3-210ENST00000533249 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.67■■■□□ 2.02
PKP3-210ENST00000533249 SDR42E1Q8WUS8 393 aa27.67■■■□□ 2.02
PKP3-210ENST00000533249 RPAP3Q9H6T3 665 aaPredicted RBP27.67■■■□□ 2.02
PKP3-210ENST00000533249 ZMYND8Q9ULU4 1186 aaPredicted RBP27.67■■■□□ 2.02
PKP3-210ENST00000533249 DDX19BQ9UMR2 479 aa27.67■■■□□ 2.02
PKP3-210ENST00000533249 CCND3P30281 292 aaPredicted RBP27.66■■■□□ 2.02
PKP3-210ENST00000533249 GABPAQ06546 454 aa27.66■■■□□ 2.02
PKP3-210ENST00000533249 MAP2K5Q13163 448 aa27.66■■■□□ 2.02
PKP3-210ENST00000533249 LCORLQ8N3X6 602 aa27.66■■■□□ 2.02
PKP3-210ENST00000533249 TCRBV5S4A2TA0A5A2 114 aa27.65■■■□□ 2.02
PKP3-210ENST00000533249 GLRX3O76003 335 aaKnown RBP27.65■■■□□ 2.02
PKP3-210ENST00000533249 ZBTB40Q9NUA8 1239 aa27.65■■■□□ 2.02
PKP3-210ENST00000533249 BTBD7Q9P203 1132 aa27.65■■■□□ 2.02
PKP3-210ENST00000533249 A0A1W2PPC1 479 aa27.64■■■□□ 2.02
PKP3-210ENST00000533249 CYP2D6P10635 497 aa27.64■■■□□ 2.02
PKP3-210ENST00000533249 ARMT1Q9H993 441 aa27.64■■■□□ 2.02
PKP3-210ENST00000533249 DCP1AQ9NPI6 582 aaPredicted RBP27.64■■■□□ 2.02
PKP3-210ENST00000533249 SZT2Q5T011 3432 aa27.63■■■□□ 2.01
PKP3-210ENST00000533249 SPDYE16A6NNV3 312 aaPredicted RBP27.63■■■□□ 2.01
PKP3-210ENST00000533249 LBX2Q6XYB7 198 aa27.63■■■□□ 2.01
PKP3-210ENST00000533249 SLC44A5Q8NCS7 719 aa27.63■■■□□ 2.01
PKP3-210ENST00000533249 SLC15A5A6NIM6 579 aa27.62■■■□□ 2.01
PKP3-210ENST00000533249 RAB11FIP3O75154 756 aa27.62■■■□□ 2.01
PKP3-210ENST00000533249 SYN1P17600 705 aa27.62■■■□□ 2.01
PKP3-210ENST00000533249 PTPREP23469 700 aa27.62■■■□□ 2.01
PKP3-210ENST00000533249 SLFNL1Q499Z3 407 aa27.62■■■□□ 2.01
PKP3-210ENST00000533249 BOLA2Q9H3K6 86 aa27.62■■■□□ 2.01
PKP3-210ENST00000533249 PAG1Q9NWQ8 432 aa27.62■■■□□ 2.01
PKP3-210ENST00000533249 IVNS1ABPQ9Y6Y0 642 aa27.62■■■□□ 2.01
PKP3-210ENST00000533249 PFASO15067 1338 aa27.62■■■□□ 2.01
PKP3-210ENST00000533249 A0A1W2PRG0 241 aa27.61■■■□□ 2.01
PKP3-210ENST00000533249 LHX8Q68G74 356 aa27.61■■■□□ 2.01
PKP3-210ENST00000533249 DYNLL2Q96FJ2 89 aa27.61■■■□□ 2.01
PKP3-210ENST00000533249 FLRT1Q9NZU1 646 aa27.61■■■□□ 2.01
PKP3-210ENST00000533249 SOX1O00570 391 aaPredicted RBP27.6■■■□□ 2.01
PKP3-210ENST00000533249 PRKAB2O43741 272 aa27.6■■■□□ 2.01
PKP3-210ENST00000533249 MBD4O95243 580 aa27.6■■■□□ 2.01
PKP3-210ENST00000533249 MFSD14CQ5VZR4 134 aa27.6■■■□□ 2.01
PKP3-210ENST00000533249 GDF15Q99988 308 aa27.6■■■□□ 2.01
PKP3-210ENST00000533249 ADD2P35612 726 aa27.59■■■□□ 2.01
PKP3-210ENST00000533249 TANGO6Q9C0B7 1094 aa27.59■■■□□ 2.01
PKP3-210ENST00000533249 ATP5JP18859 108 aa27.58■■■□□ 2.01
PKP3-210ENST00000533249 ATP2B2Q01814 1243 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms