RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 EMILIN3Q9NT22 766 aa24.41■■□□□ 1.5
CCS-208ENST00000533244 ZMYM6O95789 1325 aa24.4■■□□□ 1.5
CCS-208ENST00000533244 MPHOSPH10O00566 681 aaKnown RBP24.4■■□□□ 1.5
CCS-208ENST00000533244 CENPBP07199 599 aaPredicted RBP24.4■■□□□ 1.5
CCS-208ENST00000533244 RASA1P20936 1047 aa24.4■■□□□ 1.5
CCS-208ENST00000533244 CAP1Q01518 475 aa24.4■■□□□ 1.5
CCS-208ENST00000533244 USP17L2Q6R6M4 530 aa24.4■■□□□ 1.5
CCS-208ENST00000533244 TMOD4Q9NZQ9 345 aa24.4■■□□□ 1.5
CCS-208ENST00000533244 HSPD1P10809 573 aaKnown RBP24.39■■□□□ 1.5
CCS-208ENST00000533244 BCRP11274 1271 aa24.39■■□□□ 1.5
CCS-208ENST00000533244 HOXA7P31268 230 aaPredicted RBP24.39■■□□□ 1.5
CCS-208ENST00000533244 PPARAQ07869 468 aa24.39■■□□□ 1.5
CCS-208ENST00000533244 PABPC4Q13310 644 aaKnown RBP eCLIP24.39■■□□□ 1.52e-7■■■□□ 18
CCS-208ENST00000533244 CD99L2Q8TCZ2 262 aa24.39■■□□□ 1.5
CCS-208ENST00000533244 DIAPH3Q9NSV4 1193 aa24.39■■□□□ 1.5
CCS-208ENST00000533244 CPA4Q9UI42 421 aa24.39■■□□□ 1.5
CCS-208ENST00000533244 PNMA3Q9UL41 463 aa24.39■■□□□ 1.5
CCS-208ENST00000533244 A0A1W2PRG0 241 aa24.38■■□□□ 1.49
CCS-208ENST00000533244 NEFLP07196 543 aa24.38■■□□□ 1.49
CCS-208ENST00000533244 USP14P54578 494 aa24.38■■□□□ 1.49
CCS-208ENST00000533244 SIAH1Q8IUQ4 282 aa24.38■■□□□ 1.49
CCS-208ENST00000533244 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.38■■□□□ 1.49
CCS-208ENST00000533244 ANAPC4Q9UJX5 808 aa24.38■■□□□ 1.49
CCS-208ENST00000533244 MFAP1P55081 439 aaKnown RBP24.37■■□□□ 1.49
CCS-208ENST00000533244 CWC27Q6UX04 472 aaKnown RBP24.37■■□□□ 1.49
CCS-208ENST00000533244 FEZ1Q99689 392 aa24.37■■□□□ 1.49
CCS-208ENST00000533244 ZNF287Q9HBT7 754 aa24.37■■□□□ 1.49
CCS-208ENST00000533244 FGAP02671 866 aa24.36■■□□□ 1.49
CCS-208ENST00000533244 LACTBP83111 547 aaPredicted RBP24.36■■□□□ 1.49
CCS-208ENST00000533244 PKN2Q16513 984 aaKnown RBP24.36■■□□□ 1.49
CCS-208ENST00000533244 CLEC10AQ8IUN9 316 aa24.36■■□□□ 1.49
CCS-208ENST00000533244 ASCC2Q9H1I8 757 aaPredicted RBP24.36■■□□□ 1.49
CCS-208ENST00000533244 MKNK2Q9HBH9 465 aa24.36■■□□□ 1.49
CCS-208ENST00000533244 ICA1Q05084 483 aa24.35■■□□□ 1.49
CCS-208ENST00000533244 OTOP1Q7RTM1 612 aa24.35■■□□□ 1.49
CCS-208ENST00000533244 STK11IPQ8N1F8 1099 aa24.35■■□□□ 1.49
CCS-208ENST00000533244 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.35■■□□□ 1.49
CCS-208ENST00000533244 ZSWIM8A7E2V4 1837 aa24.35■■□□□ 1.49
CCS-208ENST00000533244 PLIN4Q96Q06 1357 aa24.35■■□□□ 1.49
CCS-208ENST00000533244 OSBPP22059 807 aa24.35■■□□□ 1.49
CCS-208ENST00000533244 ZYXQ15942 572 aaKnown RBP24.35■■□□□ 1.49
CCS-208ENST00000533244 SMCR8Q8TEV9 937 aaPredicted RBP24.35■■□□□ 1.49
CCS-208ENST00000533244 CCDC136Q96JN2 1154 aa24.35■■□□□ 1.49
CCS-208ENST00000533244 KANSL2Q9H9L4 492 aa24.35■■□□□ 1.49
CCS-208ENST00000533244 TMX2Q9Y320 296 aa24.35■■□□□ 1.49
CCS-208ENST00000533244 IGKV6D-41A0A0C4DH26 115 aa24.34■■□□□ 1.49
CCS-208ENST00000533244 PRDM1O75626 825 aa24.34■■□□□ 1.49
CCS-208ENST00000533244 SLC3A2P08195 630 aaKnown RBP24.34■■□□□ 1.49
CCS-208ENST00000533244 VCAM1P19320 739 aa24.34■■□□□ 1.49
CCS-208ENST00000533244 PDE4BQ07343 736 aa24.34■■□□□ 1.49
CCS-208ENST00000533244 ABHD8Q96I13 439 aa24.34■■□□□ 1.49
CCS-208ENST00000533244 IL25Q9H293 177 aa24.34■■□□□ 1.49
CCS-208ENST00000533244 ARHGEF10LQ9HCE6 1279 aa24.34■■□□□ 1.49
CCS-208ENST00000533244 TRIM17Q9Y577 477 aa24.34■■□□□ 1.49
CCS-208ENST00000533244 FGRP09769 529 aa24.33■■□□□ 1.49
CCS-208ENST00000533244 EFCC1Q9HA90 598 aa24.33■■□□□ 1.49
CCS-208ENST00000533244 TACC3Q9Y6A5 838 aa24.33■■□□□ 1.49
CCS-208ENST00000533244 RAD50Q92878 1312 aa24.32■■□□□ 1.48
CCS-208ENST00000533244 EEF2P13639 858 aaKnown RBP24.32■■□□□ 1.48
CCS-208ENST00000533244 CHMLP26374 656 aa24.32■■□□□ 1.48
CCS-208ENST00000533244 CTGFP29279 349 aa24.32■■□□□ 1.48
CCS-208ENST00000533244 GCLCP48506 637 aaPredicted RBP24.32■■□□□ 1.48
CCS-208ENST00000533244 IRX3P78415 501 aaPredicted RBP24.32■■□□□ 1.48
CCS-208ENST00000533244 CTDSPL2Q05D32 466 aa24.32■■□□□ 1.48
CCS-208ENST00000533244 FBXO46Q6PJ61 603 aaPredicted RBP24.32■■□□□ 1.48
CCS-208ENST00000533244 ZNF444Q8N0Y2 327 aaPredicted RBP24.32■■□□□ 1.48
CCS-208ENST00000533244 ARHGAP39Q9C0H5 1083 aa24.32■■□□□ 1.48
CCS-208ENST00000533244 SH2D4AQ9H788 454 aa24.32■■□□□ 1.48
CCS-208ENST00000533244 HTTP42858 3142 aa24.31■■□□□ 1.48
CCS-208ENST00000533244 USP17L15C9J2P7 530 aa24.31■■□□□ 1.48
CCS-208ENST00000533244 USP17L13C9JLJ4 530 aa24.31■■□□□ 1.48
CCS-208ENST00000533244 USP17L11C9JVI0 530 aa24.31■■□□□ 1.48
CCS-208ENST00000533244 USP17L18D6R9N7 530 aa24.31■■□□□ 1.48
CCS-208ENST00000533244 USP17L22D6RA61 530 aa24.31■■□□□ 1.48
CCS-208ENST00000533244 USP17L17D6RBQ6 530 aa24.31■■□□□ 1.48
CCS-208ENST00000533244 USP17L19D6RCP7 530 aa24.31■■□□□ 1.48
CCS-208ENST00000533244 USP17L20D6RJB6 530 aa24.31■■□□□ 1.48
CCS-208ENST00000533244 USP17L24Q0WX57 530 aa24.31■■□□□ 1.48
CCS-208ENST00000533244 FAM110CQ1W6H9 321 aa24.31■■□□□ 1.48
CCS-208ENST00000533244 SKAP1Q86WV1 359 aa24.31■■□□□ 1.48
CCS-208ENST00000533244 P2RX7Q99572 595 aaKnown RBP24.31■■□□□ 1.48
CCS-208ENST00000533244 DSCC1Q9BVC3 393 aa24.31■■□□□ 1.48
CCS-208ENST00000533244 LAMA4Q16363 1823 aa24.31■■□□□ 1.48
CCS-208ENST00000533244 HERVK_113P62684 666 aa24.3■■□□□ 1.48
CCS-208ENST00000533244 KIF22Q14807 665 aa24.3■■□□□ 1.48
CCS-208ENST00000533244 ARHGEF6Q15052 776 aa24.3■■□□□ 1.48
CCS-208ENST00000533244 KIAA1755Q5JYT7 1200 aa24.3■■□□□ 1.48
CCS-208ENST00000533244 IFFO2Q5TF58 517 aa24.3■■□□□ 1.48
CCS-208ENST00000533244 ERICH6BQ5W0A0 696 aa24.3■■□□□ 1.48
CCS-208ENST00000533244 CATSPERGQ6ZRH7 1159 aa24.3■■□□□ 1.48
CCS-208ENST00000533244 NEDD1Q8NHV4 660 aa24.3■■□□□ 1.48
CCS-208ENST00000533244 LPAR1Q92633 364 aa24.3■■□□□ 1.48
CCS-208ENST00000533244 VCPKMTQ9H867 229 aa24.3■■□□□ 1.48
CCS-208ENST00000533244 NYAP2Q9P242 653 aa24.3■■□□□ 1.48
CCS-208ENST00000533244 MORF4L1Q9UBU8 362 aa24.3■■□□□ 1.48
CCS-208ENST00000533244 ORC4O43929 436 aa24.29■■□□□ 1.48
CCS-208ENST00000533244 GNRH1P01148 92 aa24.29■■□□□ 1.48
CCS-208ENST00000533244 ANKRD13CQ8N6S4 541 aa24.29■■□□□ 1.48
CCS-208ENST00000533244 TRIM47Q96LD4 638 aa24.29■■□□□ 1.48
CCS-208ENST00000533244 MGAMO43451 1857 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms