RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 POTEJP0CG39 1038 aa21.61■■□□□ 1.05
SMPD1-208ENST00000533123 NT5C2P49902 561 aa21.61■■□□□ 1.05
SMPD1-208ENST00000533123 RRP1BQ14684 758 aaKnown RBP21.61■■□□□ 1.05
SMPD1-208ENST00000533123 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.61■■□□□ 1.05
SMPD1-208ENST00000533123 ADM5C9JUS6 153 aa21.61■■□□□ 1.05
SMPD1-208ENST00000533123 TRAK2O60296 914 aa21.61■■□□□ 1.05
SMPD1-208ENST00000533123 TBC1D12O60347 775 aa21.61■■□□□ 1.05
SMPD1-208ENST00000533123 GDF11O95390 407 aa21.61■■□□□ 1.05
SMPD1-208ENST00000533123 VEGFAP15692 232 aaPredicted RBP21.61■■□□□ 1.05
SMPD1-208ENST00000533123 LIFRP42702 1097 aa21.61■■□□□ 1.05
SMPD1-208ENST00000533123 FOXD4L6Q3SYB3 417 aaPredicted RBP21.61■■□□□ 1.05
SMPD1-208ENST00000533123 FOXD4L3Q6VB84 417 aaPredicted RBP21.61■■□□□ 1.05
SMPD1-208ENST00000533123 NFXL1Q6ZNB6 911 aa21.61■■□□□ 1.05
SMPD1-208ENST00000533123 KRT26Q7Z3Y9 468 aa21.61■■□□□ 1.05
SMPD1-208ENST00000533123 MTA3Q9BTC8 594 aa21.61■■□□□ 1.05
SMPD1-208ENST00000533123 CCT2P78371 535 aaKnown RBP21.6■■□□□ 1.05
SMPD1-208ENST00000533123 NCOA5Q9HCD5 579 aaKnown RBP21.6■■□□□ 1.05
SMPD1-208ENST00000533123 TAOK2Q9UL54 1235 aa21.6■■□□□ 1.05
SMPD1-208ENST00000533123 KLF18A0A0U1RQI7 1052 aa21.6■■□□□ 1.05
SMPD1-208ENST00000533123 PDIA3P30101 505 aaKnown RBP21.6■■□□□ 1.05
SMPD1-208ENST00000533123 MAP3K10Q02779 954 aa21.6■■□□□ 1.05
SMPD1-208ENST00000533123 RAB11FIP4Q86YS3 637 aa21.6■■□□□ 1.05
SMPD1-208ENST00000533123 CCDC17Q96LX7 622 aa21.6■■□□□ 1.05
SMPD1-208ENST00000533123 NMRK2Q9NPI5 230 aa21.6■■□□□ 1.05
SMPD1-208ENST00000533123 TCP11L1Q9NUJ3 509 aa21.6■■□□□ 1.05
SMPD1-208ENST00000533123 CLEC11AQ9Y240 323 aa21.6■■□□□ 1.05
SMPD1-208ENST00000533123 PPP2R3BQ9Y5P8 575 aa21.6■■□□□ 1.05
SMPD1-208ENST00000533123 ZSCAN22P10073 491 aaPredicted RBP21.59■■□□□ 1.05
SMPD1-208ENST00000533123 IFIT1BQ5T764 474 aaKnown RBP21.59■■□□□ 1.05
SMPD1-208ENST00000533123 RCSD1Q6JBY9 416 aa21.59■■□□□ 1.05
SMPD1-208ENST00000533123 CEP95Q96GE4 821 aa21.59■■□□□ 1.05
SMPD1-208ENST00000533123 STX8Q9UNK0 236 aa21.59■■□□□ 1.05
SMPD1-208ENST00000533123 CCDC69A6NI79 296 aa21.59■■□□□ 1.05
SMPD1-208ENST00000533123 GOLGA6L22H0YM25 854 aa21.59■■□□□ 1.05
SMPD1-208ENST00000533123 EVCP57679 992 aa21.59■■□□□ 1.05
SMPD1-208ENST00000533123 JAG1P78504 1218 aa21.59■■□□□ 1.05
SMPD1-208ENST00000533123 SGMS1Q86VZ5 419 aa21.59■■□□□ 1.05
SMPD1-208ENST00000533123 CLEC10AQ8IUN9 316 aa21.59■■□□□ 1.05
SMPD1-208ENST00000533123 FZD1Q9UP38 647 aa21.59■■□□□ 1.05
SMPD1-208ENST00000533123 USP48Q86UV5 1035 aa21.58■■□□□ 1.05
SMPD1-208ENST00000533123 TMTC2Q8N394 836 aa21.58■■□□□ 1.05
SMPD1-208ENST00000533123 MTMR6Q9Y217 621 aa21.58■■□□□ 1.05
SMPD1-208ENST00000533123 ABCB5Q2M3G0 1257 aa21.57■■□□□ 1.04
SMPD1-208ENST00000533123 DDX11Q96FC9 970 aa21.57■■□□□ 1.04
SMPD1-208ENST00000533123 ZNF274Q96GC6 653 aaPredicted RBP21.57■■□□□ 1.04
SMPD1-208ENST00000533123 MYL10Q9BUA6 226 aa21.57■■□□□ 1.04
SMPD1-208ENST00000533123 VPS37CA5D8V6 355 aaPredicted RBP21.57■■□□□ 1.04
SMPD1-208ENST00000533123 CTDNEP1O95476 244 aa21.57■■□□□ 1.04
SMPD1-208ENST00000533123 RXRAP19793 462 aa21.57■■□□□ 1.04
SMPD1-208ENST00000533123 APOA5Q6Q788 366 aa21.57■■□□□ 1.04
SMPD1-208ENST00000533123 DGKHQ86XP1 1220 aa21.57■■□□□ 1.04
SMPD1-208ENST00000533123 GLIS2Q9BZE0 524 aaPredicted RBP21.57■■□□□ 1.04
SMPD1-208ENST00000533123 SLC12A7Q9Y666 1083 aa21.57■■□□□ 1.04
SMPD1-208ENST00000533123 PLIN4Q96Q06 1357 aa21.57■■□□□ 1.04
SMPD1-208ENST00000533123 GOLGA8BA8MQT2 603 aa21.56■■□□□ 1.04
SMPD1-208ENST00000533123 PPFIA3O75145 1194 aa21.56■■□□□ 1.04
SMPD1-208ENST00000533123 GH2P01242 217 aa21.56■■□□□ 1.04
SMPD1-208ENST00000533123 LARP1BQ659C4 914 aaKnown RBP21.56■■□□□ 1.04
SMPD1-208ENST00000533123 MTMR4Q9NYA4 1195 aa21.56■■□□□ 1.04
SMPD1-208ENST00000533123 IGKV6D-41A0A0C4DH26 115 aa21.56■■□□□ 1.04
SMPD1-208ENST00000533123 PHF20L1A8MW92 1017 aa21.56■■□□□ 1.04
SMPD1-208ENST00000533123 SUPT20HL1Q3ZLR7 823 aa21.56■■□□□ 1.04
SMPD1-208ENST00000533123 CCDC178Q5BJE1 867 aa21.56■■□□□ 1.04
SMPD1-208ENST00000533123 MICU3Q86XE3 530 aa21.56■■□□□ 1.04
SMPD1-208ENST00000533123 NSUN7Q8NE18 718 aaKnown RBP21.56■■□□□ 1.04
SMPD1-208ENST00000533123 HPS5Q9UPZ3 1129 aa21.56■■□□□ 1.04
SMPD1-208ENST00000533123 F13A1P00488 732 aa21.55■■□□□ 1.04
SMPD1-208ENST00000533123 SEPT2Q15019 361 aa21.55■■□□□ 1.04
SMPD1-208ENST00000533123 MAP1SQ66K74 1059 aaPredicted RBP21.55■■□□□ 1.04
SMPD1-208ENST00000533123 CCDC144CPQ8IYA2 1237 aa21.55■■□□□ 1.04
SMPD1-208ENST00000533123 GUCY1A2P33402 732 aa21.55■■□□□ 1.04
SMPD1-208ENST00000533123 CAP2P40123 477 aa21.55■■□□□ 1.04
SMPD1-208ENST00000533123 PRKG1Q13976 671 aa21.55■■□□□ 1.04
SMPD1-208ENST00000533123 DCAF15Q66K64 600 aa21.55■■□□□ 1.04
SMPD1-208ENST00000533123 TMEM179Q6ZVK1 233 aa21.55■■□□□ 1.04
SMPD1-208ENST00000533123 CDC37L1Q7L3B6 337 aa21.55■■□□□ 1.04
SMPD1-208ENST00000533123 ZNF654Q8IZM8 581 aa21.55■■□□□ 1.04
SMPD1-208ENST00000533123 ANKS1AQ92625 1134 aa21.55■■□□□ 1.04
SMPD1-208ENST00000533123 HOOK2Q96ED9 719 aa21.55■■□□□ 1.04
SMPD1-208ENST00000533123 TMEM47Q9BQJ4 181 aa21.55■■□□□ 1.04
SMPD1-208ENST00000533123 GZF1Q9H116 711 aaPredicted RBP21.55■■□□□ 1.04
SMPD1-208ENST00000533123 CABP5Q9NP86 173 aa21.55■■□□□ 1.04
SMPD1-208ENST00000533123 LMBRD1Q9NUN5 540 aa21.55■■□□□ 1.04
SMPD1-208ENST00000533123 SSC5DA1L4H1 1573 aa21.54■■□□□ 1.04
SMPD1-208ENST00000533123 ZBTB43O43298 467 aa21.54■■□□□ 1.04
SMPD1-208ENST00000533123 SYNE3Q6ZMZ3 975 aa21.54■■□□□ 1.04
SMPD1-208ENST00000533123 SMARCC2Q8TAQ2 1214 aa21.54■■□□□ 1.04
SMPD1-208ENST00000533123 KAT14Q9H8E8 782 aa21.54■■□□□ 1.04
SMPD1-208ENST00000533123 PRPF40AO75400 957 aaKnown RBP21.53■■□□□ 1.04
SMPD1-208ENST00000533123 ATP2B2Q01814 1243 aa21.53■■□□□ 1.04
SMPD1-208ENST00000533123 NUP133Q8WUM0 1156 aa21.53■■□□□ 1.04
SMPD1-208ENST00000533123 LLPHQ9BRT6 129 aaKnown RBP21.53■■□□□ 1.04
SMPD1-208ENST00000533123 ZNF341Q9BYN7 854 aa21.53■■□□□ 1.04
SMPD1-208ENST00000533123 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.53■■□□□ 1.04
SMPD1-208ENST00000533123 CLIP2Q9UDT6 1046 aa21.53■■□□□ 1.04
SMPD1-208ENST00000533123 GREB1LQ9C091 1923 aaPredicted RBP21.53■■□□□ 1.04
SMPD1-208ENST00000533123 PTPDC1A2A3K4 754 aa21.53■■□□□ 1.04
SMPD1-208ENST00000533123 NOVP48745 357 aa21.53■■□□□ 1.04
SMPD1-208ENST00000533123 CATIPQ7Z7H3 387 aa21.53■■□□□ 1.04
SMPD1-208ENST00000533123 CDCA5Q96FF9 252 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms