RNA–Protein interactions for RNA: ENST00000532932.5

LTBP3-221, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 3,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-221ENST00000532932 APTXQ7Z2E3 356 aaKnown RBP16.75■□□□□ 0.27
LTBP3-221ENST00000532932 IQUBQ8NA54 791 aa16.75■□□□□ 0.27
LTBP3-221ENST00000532932 CEP131Q9UPN4 1083 aa16.75■□□□□ 0.27
LTBP3-221ENST00000532932 SRGAP2O75044 1071 aa16.74■□□□□ 0.27
LTBP3-221ENST00000532932 PDE6AP16499 860 aa16.74■□□□□ 0.27
LTBP3-221ENST00000532932 NOP2P46087 812 aaKnown RBP16.74■□□□□ 0.27
LTBP3-221ENST00000532932 HELBQ8NG08 1087 aaPredicted RBP16.74■□□□□ 0.27
LTBP3-221ENST00000532932 CTAGE1Q96RT6 745 aa16.74■□□□□ 0.27
LTBP3-221ENST00000532932 IFNAR1P17181 557 aa16.74■□□□□ 0.27
LTBP3-221ENST00000532932 GPTP24298 496 aa16.74■□□□□ 0.27
LTBP3-221ENST00000532932 TMTC1Q8IUR5 882 aa16.74■□□□□ 0.27
LTBP3-221ENST00000532932 GSPT2Q8IYD1 628 aaKnown RBP16.74■□□□□ 0.27
LTBP3-221ENST00000532932 AFAP1L1Q8TED9 768 aa16.74■□□□□ 0.27
LTBP3-221ENST00000532932 ARMT1Q9H993 441 aa16.74■□□□□ 0.27
LTBP3-221ENST00000532932 TRIM75PA6NK02 468 aa16.73■□□□□ 0.27
LTBP3-221ENST00000532932 WTAPQ15007 396 aa16.73■□□□□ 0.27
LTBP3-221ENST00000532932 PACS2Q86VP3 889 aa16.73■□□□□ 0.27
LTBP3-221ENST00000532932 SYMPKQ92797 1274 aaKnown RBP16.73■□□□□ 0.27
LTBP3-221ENST00000532932 PAGE5Q96GU1 130 aa16.73■□□□□ 0.27
LTBP3-221ENST00000532932 CHP1Q99653 195 aa16.73■□□□□ 0.27
LTBP3-221ENST00000532932 VPS54Q9P1Q0 977 aa16.73■□□□□ 0.27
LTBP3-221ENST00000532932 ERICH2A1L162 156 aa16.73■□□□□ 0.27
LTBP3-221ENST00000532932 MBD4O95243 580 aa16.73■□□□□ 0.27
LTBP3-221ENST00000532932 ZNF174Q15697 407 aa16.73■□□□□ 0.27
LTBP3-221ENST00000532932 PLEKHG2Q9H7P9 1386 aa16.73■□□□□ 0.27
LTBP3-221ENST00000532932 NWD2Q9ULI1 1742 aa16.73■□□□□ 0.27
LTBP3-221ENST00000532932 PRDM1O75626 825 aa16.73■□□□□ 0.27
LTBP3-221ENST00000532932 MAGEA9P43362 315 aa16.73■□□□□ 0.27
LTBP3-221ENST00000532932 TDO2P48775 406 aa16.73■□□□□ 0.27
LTBP3-221ENST00000532932 KRT31Q15323 416 aa16.73■□□□□ 0.27
LTBP3-221ENST00000532932 MFSD6Q6ZSS7 791 aa16.73■□□□□ 0.27
LTBP3-221ENST00000532932 CAGE1Q8TC20 777 aa16.73■□□□□ 0.27
LTBP3-221ENST00000532932 SMARCC1Q92922 1105 aaPredicted RBP16.73■□□□□ 0.27
LTBP3-221ENST00000532932 PHKA1P46020 1223 aa16.72■□□□□ 0.27
LTBP3-221ENST00000532932 IRX3P78415 501 aaPredicted RBP16.72■□□□□ 0.27
LTBP3-221ENST00000532932 TUBB2AQ13885 445 aa16.72■□□□□ 0.27
LTBP3-221ENST00000532932 CYP26C1Q6V0L0 522 aa16.72■□□□□ 0.27
LTBP3-221ENST00000532932 TUBB2BQ9BVA1 445 aa16.72■□□□□ 0.27
LTBP3-221ENST00000532932 ABHD10Q9NUJ1 306 aa16.72■□□□□ 0.27
LTBP3-221ENST00000532932 PRKAB2O43741 272 aa16.72■□□□□ 0.27
LTBP3-221ENST00000532932 DPYDQ12882 1025 aa16.72■□□□□ 0.27
LTBP3-221ENST00000532932 CUL4BQ13620 913 aa16.72■□□□□ 0.27
LTBP3-221ENST00000532932 SGMS1Q86VZ5 419 aa16.72■□□□□ 0.27
LTBP3-221ENST00000532932 IFNL3Q8IZI9 196 aa16.72■□□□□ 0.27
LTBP3-221ENST00000532932 DRC1Q96MC2 740 aa16.72■□□□□ 0.27
LTBP3-221ENST00000532932 FOXP1Q9H334 677 aaPredicted RBP16.72■□□□□ 0.27
LTBP3-221ENST00000532932 MKRN1Q9UHC7 482 aaKnown RBP16.72■□□□□ 0.27
LTBP3-221ENST00000532932 MEGF6O75095 1541 aa16.72■□□□□ 0.27
LTBP3-221ENST00000532932 ARHGAP25P42331 645 aa16.72■□□□□ 0.27
LTBP3-221ENST00000532932 SART3Q15020 963 aaKnown RBP16.72■□□□□ 0.27
LTBP3-221ENST00000532932 CTR9Q6PD62 1173 aa16.72■□□□□ 0.27
LTBP3-221ENST00000532932 ZNF335Q9H4Z2 1342 aaPredicted RBP16.71■□□□□ 0.27
LTBP3-221ENST00000532932 DEXIO95424 95 aa16.71■□□□□ 0.27
LTBP3-221ENST00000532932 ELOA2Q8IYF1 753 aaPredicted RBP16.71■□□□□ 0.27
LTBP3-221ENST00000532932 MAGEB6Q8N7X4 407 aa16.71■□□□□ 0.27
LTBP3-221ENST00000532932 ANKRD20A12PQ8NF67 263 aa16.71■□□□□ 0.27
LTBP3-221ENST00000532932 STRBPQ96SI9 672 aaKnown RBP16.71■□□□□ 0.27
LTBP3-221ENST00000532932 PBX1P40424 430 aa16.71■□□□□ 0.27
LTBP3-221ENST00000532932 UBXN1Q04323 297 aa16.71■□□□□ 0.27
LTBP3-221ENST00000532932 CRACR2AQ9BSW2 395 aa16.71■□□□□ 0.27
LTBP3-221ENST00000532932 PPP1R3GB7ZBB8 358 aa16.7■□□□□ 0.26
LTBP3-221ENST00000532932 CDKAL1Q5VV42 579 aa16.7■□□□□ 0.26
LTBP3-221ENST00000532932 EPB41L4AQ9HCS5 686 aaPredicted RBP16.7■□□□□ 0.26
LTBP3-221ENST00000532932 MED4Q9NPJ6 270 aa16.7■□□□□ 0.26
LTBP3-221ENST00000532932 STRN4Q9NRL3 753 aa16.7■□□□□ 0.26
LTBP3-221ENST00000532932 TACC3Q9Y6A5 838 aa16.7■□□□□ 0.26
LTBP3-221ENST00000532932 LIFRP42702 1097 aa16.7■□□□□ 0.26
LTBP3-221ENST00000532932 COPB1P53618 953 aaKnown RBP16.7■□□□□ 0.26
LTBP3-221ENST00000532932 TTF1Q15361 905 aaPredicted RBP16.7■□□□□ 0.26
LTBP3-221ENST00000532932 ICE2Q659A1 982 aa16.7■□□□□ 0.26
LTBP3-221ENST00000532932 MICALL1Q8N3F8 863 aa16.7■□□□□ 0.26
LTBP3-221ENST00000532932 CRACR2BQ8N4Y2 399 aaPredicted RBP16.7■□□□□ 0.26
LTBP3-221ENST00000532932 ZNF579Q8NAF0 562 aaKnown RBP16.7■□□□□ 0.26
LTBP3-221ENST00000532932 MMS19Q96T76 1030 aa16.7■□□□□ 0.26
LTBP3-221ENST00000532932 JRKLQ9Y4A0 524 aa16.7■□□□□ 0.26
LTBP3-221ENST00000532932 EPN1Q9Y6I3 576 aaPredicted RBP16.7■□□□□ 0.26
LTBP3-221ENST00000532932 STK36Q9NRP7 1315 aa16.7■□□□□ 0.26
LTBP3-221ENST00000532932 ITGA6P23229 1130 aa16.7■□□□□ 0.26
LTBP3-221ENST00000532932 TUBB4BP68371 445 aa16.7■□□□□ 0.26
LTBP3-221ENST00000532932 EARS2Q5JPH6 523 aaKnown RBP16.7■□□□□ 0.26
LTBP3-221ENST00000532932 CADPS2Q86UW7 1296 aa16.7■□□□□ 0.26
LTBP3-221ENST00000532932 CCDC51Q96ER9 411 aa16.7■□□□□ 0.26
LTBP3-221ENST00000532932 KDM4FA0A1W2PPD8 638 aa16.69■□□□□ 0.26
LTBP3-221ENST00000532932 SNAP23O00161 211 aa16.69■□□□□ 0.26
LTBP3-221ENST00000532932 STIM1Q13586 685 aa16.69■□□□□ 0.26
LTBP3-221ENST00000532932 TSR1Q2NL82 804 aaKnown RBP16.69■□□□□ 0.26
LTBP3-221ENST00000532932 CCDC122Q5T0U0 273 aa16.69■□□□□ 0.26
LTBP3-221ENST00000532932 AKNAD1Q5T1N1 836 aa16.69■□□□□ 0.26
LTBP3-221ENST00000532932 KIAA1328Q86T90 577 aa16.69■□□□□ 0.26
LTBP3-221ENST00000532932 GREM2Q9H772 168 aa16.69■□□□□ 0.26
LTBP3-221ENST00000532932 MINDY4BA8MYZ0 360 aa16.69■□□□□ 0.26
LTBP3-221ENST00000532932 ATP1A1P05023 1023 aaKnown RBP16.69■□□□□ 0.26
LTBP3-221ENST00000532932 UBE3CQ15386 1083 aa16.69■□□□□ 0.26
LTBP3-221ENST00000532932 SPATA20Q8TB22 786 aa16.68■□□□□ 0.26
LTBP3-221ENST00000532932 UBAC1Q9BSL1 405 aa16.68■□□□□ 0.26
LTBP3-221ENST00000532932 KCNJ18B7U540 433 aa16.68■□□□□ 0.26
LTBP3-221ENST00000532932 MRPS25P82663 173 aaKnown RBP16.68■□□□□ 0.26
LTBP3-221ENST00000532932 TCIRG1Q13488 830 aa16.68■□□□□ 0.26
LTBP3-221ENST00000532932 KCNJ12Q14500 433 aa16.68■□□□□ 0.26
LTBP3-221ENST00000532932 MIGA1Q8NAN2 632 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms