RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 MYOM2P54296 1465 aa11.96□□□□□ -0.49
COLCA1-203ENST00000532918 STK10O94804 968 aaKnown RBP11.96□□□□□ -0.49
COLCA1-203ENST00000532918 BCAMP50895 628 aa11.96□□□□□ -0.49
COLCA1-203ENST00000532918 YARSP54577 528 aaKnown RBP11.96□□□□□ -0.49
COLCA1-203ENST00000532918 ANO6Q4KMQ2 910 aa11.96□□□□□ -0.49
COLCA1-203ENST00000532918 SLFN13Q68D06 897 aa11.96□□□□□ -0.49
COLCA1-203ENST00000532918 CLEC4GQ6UXB4 293 aa11.96□□□□□ -0.49
COLCA1-203ENST00000532918 JAKMIP2Q96AA8 810 aa11.96□□□□□ -0.49
COLCA1-203ENST00000532918 STMN4Q9H169 189 aaPredicted RBP11.96□□□□□ -0.49
COLCA1-203ENST00000532918 TMEM110-MUSTN1A8MSY1 372 aa11.96□□□□□ -0.5
COLCA1-203ENST00000532918 RPS6KA4O75676 772 aa11.96□□□□□ -0.5
COLCA1-203ENST00000532918 GNG11P61952 73 aa11.96□□□□□ -0.5
COLCA1-203ENST00000532918 CSRNP1Q96S65 589 aa11.96□□□□□ -0.5
COLCA1-203ENST00000532918 ZSCAN10Q96SZ4 725 aaPredicted RBP11.96□□□□□ -0.5
COLCA1-203ENST00000532918 SMCO2A6NFE2 343 aa11.96□□□□□ -0.5
COLCA1-203ENST00000532918 DAPK3O43293 454 aa11.96□□□□□ -0.5
COLCA1-203ENST00000532918 CUTAO60888 179 aa11.96□□□□□ -0.5
COLCA1-203ENST00000532918 PDE8BO95263 885 aa11.96□□□□□ -0.5
COLCA1-203ENST00000532918 EXOC8Q8IYI6 725 aa11.96□□□□□ -0.5
COLCA1-203ENST00000532918 METTL13Q8N6R0 699 aa11.96□□□□□ -0.5
COLCA1-203ENST00000532918 CEP112Q8N8E3 955 aa11.96□□□□□ -0.5
COLCA1-203ENST00000532918 RAB3IL1Q8TBN0 382 aa11.96□□□□□ -0.5
COLCA1-203ENST00000532918 GPR108Q9NPR9 543 aa11.96□□□□□ -0.5
COLCA1-203ENST00000532918 TRMT1Q9NXH9 659 aaKnown RBP11.96□□□□□ -0.5
COLCA1-203ENST00000532918 JCADQ9P266 1359 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 TNFAIP3P21580 790 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 FAM47AQ5JRC9 791 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 SLC10A4Q96EP9 437 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 PSTPIP2Q9H939 334 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 LUC7L2Q9Y383 392 aaKnown RBP11.95□□□□□ -0.5
COLCA1-203ENST00000532918 ZCCHC11Q5TAX3 1644 aaKnown RBP11.95□□□□□ -0.5
COLCA1-203ENST00000532918 ROBO2Q9HCK4 1378 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 MYO3BQ8WXR4 1341 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 A0A1W2PRG0 241 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 RLBP1P12271 317 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 ERFEQ4G0M1 354 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 ANO1Q5XXA6 986 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 GIMAP6Q6P9H5 292 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 MAATS1Q7Z4T9 603 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 AOPEPQ8N6M6 819 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 TSGA10Q9BZW7 698 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 CCPG1Q9ULG6 757 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 MMP10P09238 476 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 FNBP4Q8N3X1 1017 aaPredicted RBP11.95□□□□□ -0.5
COLCA1-203ENST00000532918 IGSF1Q8N6C5 1336 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 USP17L3A6NCW0 530 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 USP17L4A6NCW7 530 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 PDE6AP16499 860 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 GRAPQ13588 217 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 ELMSAN1Q6PJG2 1045 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 EP400NLQ6ZTU2 488 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 CEP128Q6ZU80 1094 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 USP17L1Q7RTZ2 530 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 IFNL3Q8IZI9 196 aa11.95□□□□□ -0.5
COLCA1-203ENST00000532918 GRAPLQ8TC17 118 aaPredicted RBP11.95□□□□□ -0.5
COLCA1-203ENST00000532918 OVOS2A0A0G2JMS6 1433 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 OVOS2A0A0J9YW53 1432 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 OVOS2Q6IE36 1432 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 SGSM2O43147 1006 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 TFDP1Q14186 410 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 GPATCH4Q5T3I0 446 aaKnown RBP11.94□□□□□ -0.5
COLCA1-203ENST00000532918 SEL1L2Q5TEA6 688 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 RIOK1Q9BRS2 568 aaKnown RBP11.94□□□□□ -0.5
COLCA1-203ENST00000532918 NOC4LQ9BVI4 516 aaKnown RBP11.94□□□□□ -0.5
COLCA1-203ENST00000532918 TEKT3Q9BXF9 490 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 USP26Q9BXU7 913 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 DDAH1O94760 285 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 HERC4Q5GLZ8 1057 aaPredicted RBP11.94□□□□□ -0.5
COLCA1-203ENST00000532918 CTR9Q6PD62 1173 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 CPSF2Q9P2I0 782 aaKnown RBP11.94□□□□□ -0.5
COLCA1-203ENST00000532918 EXOC3O60645 756 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 KRT19P08727 400 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 TRIM14Q14142 442 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 UBE3CQ15386 1083 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 COA1Q9GZY4 146 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 ARAP3Q8WWN8 1544 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 KCNQ3O43525 872 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 XPOTO43592 962 aaKnown RBP11.94□□□□□ -0.5
COLCA1-203ENST00000532918 RABGAP1Q9Y3P9 1069 aa11.94□□□□□ -0.5
COLCA1-203ENST00000532918 CHD1O14646 1710 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 TMEM232C9JQI7 657 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 SPECC1LQ69YQ0 1117 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 GREM2Q9H772 168 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 AGTPBP1Q9UPW5 1226 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 A2ML1A8K2U0 1454 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 CLRN2A0PK11 232 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 CNGA4Q8IV77 575 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 ZNF654Q8IZM8 581 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 PCDHB13Q9Y5F0 798 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 MBD5Q9P267 1494 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 STX17P56962 302 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 TPH2Q8IWU9 490 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 ABI1Q8IZP0 508 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 GOLGA5Q8TBA6 731 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 FAM227BQ96M60 508 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 STIM2Q9P246 746 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 SPATA31A6Q5VVP1 1343 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 RNF123Q5XPI4 1314 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 FAM160A1Q05DH4 1040 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 CFAP58Q5T655 872 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms