RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 TTF1Q15361 905 aaPredicted RBP20.74■□□□□ 0.91
RPUSD4-207ENST00000532800 SLC9C2Q5TAH2 1124 aa20.74■□□□□ 0.91
RPUSD4-207ENST00000532800 MAP3K21Q5TCX8 1036 aa20.74■□□□□ 0.91
RPUSD4-207ENST00000532800 GPR142Q7Z601 462 aa20.74■□□□□ 0.91
RPUSD4-207ENST00000532800 NECAB2Q7Z6G3 386 aa20.74■□□□□ 0.91
RPUSD4-207ENST00000532800 CLASRPQ8N2M8 674 aaKnown RBP20.74■□□□□ 0.91
RPUSD4-207ENST00000532800 KIF1BPQ96EK5 621 aa20.74■□□□□ 0.91
RPUSD4-207ENST00000532800 EDC3Q96F86 508 aaKnown RBP20.74■□□□□ 0.91
RPUSD4-207ENST00000532800 POLR3DP05423 398 aaPredicted RBP20.73■□□□□ 0.91
RPUSD4-207ENST00000532800 VCAM1P19320 739 aa20.73■□□□□ 0.91
RPUSD4-207ENST00000532800 GUCY1A2P33402 732 aa20.73■□□□□ 0.91
RPUSD4-207ENST00000532800 MNX1P50219 401 aaPredicted RBP20.73■□□□□ 0.91
RPUSD4-207ENST00000532800 PDE3AQ14432 1141 aa20.73■□□□□ 0.91
RPUSD4-207ENST00000532800 GTF3C2Q8WUA4 911 aaPredicted RBP20.73■□□□□ 0.91
RPUSD4-207ENST00000532800 USP6NLQ92738 828 aa20.73■□□□□ 0.91
RPUSD4-207ENST00000532800 KIAA1683Q9H0B3 1180 aa20.73■□□□□ 0.91
RPUSD4-207ENST00000532800 ZBTB40Q9NUA8 1239 aa20.73■□□□□ 0.91
RPUSD4-207ENST00000532800 ZNF532Q9HCE3 1301 aa20.73■□□□□ 0.91
RPUSD4-207ENST00000532800 TCRBV5S4A2TA0A5A2 114 aa20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 USP17L15C9J2P7 530 aa20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 USP17L13C9JLJ4 530 aa20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 USP17L11C9JVI0 530 aa20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 USP17L18D6R9N7 530 aa20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 USP17L22D6RA61 530 aa20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 USP17L17D6RBQ6 530 aa20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 USP17L19D6RCP7 530 aa20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 USP17L20D6RJB6 530 aa20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 XRCC5P13010 732 aaKnown RBP20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 GABPAQ06546 454 aa20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 USP17L24Q0WX57 530 aa20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 CCL14Q16627 93 aa20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 MORN1Q5T089 497 aa20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 PLEKHH3Q7Z736 793 aa20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 CCAR1Q8IX12 1150 aaKnown RBP20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 RPAP2Q8IXW5 612 aaPredicted RBP20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 LCORLQ8N3X6 602 aa20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 ANKLE1Q8NAG6 615 aa20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 SDR42E1Q8WUS8 393 aa20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 CRNKL1Q9BZJ0 848 aaKnown RBP20.72■□□□□ 0.91
RPUSD4-207ENST00000532800 IFIT2P09913 472 aaKnown RBP20.71■□□□□ 0.91
RPUSD4-207ENST00000532800 MS4A1P11836 297 aa20.71■□□□□ 0.91
RPUSD4-207ENST00000532800 ZKSCAN1P17029 563 aaPredicted RBP20.71■□□□□ 0.91
RPUSD4-207ENST00000532800 USP14P54578 494 aa20.71■□□□□ 0.91
RPUSD4-207ENST00000532800 SEPT2Q15019 361 aa20.71■□□□□ 0.91
RPUSD4-207ENST00000532800 SLFNL1Q499Z3 407 aa20.71■□□□□ 0.91
RPUSD4-207ENST00000532800 CATSPERGQ6ZRH7 1159 aa20.71■□□□□ 0.91
RPUSD4-207ENST00000532800 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.71■□□□□ 0.91
RPUSD4-207ENST00000532800 CABP5Q9NP86 173 aa20.71■□□□□ 0.91
RPUSD4-207ENST00000532800 MCM9Q9NXL9 1143 aa20.71■□□□□ 0.91
RPUSD4-207ENST00000532800 DDX19BQ9UMR2 479 aa20.71■□□□□ 0.91
RPUSD4-207ENST00000532800 RABGAP1Q9Y3P9 1069 aa20.71■□□□□ 0.91
RPUSD4-207ENST00000532800 HMMRO75330 724 aa20.7■□□□□ 0.9
RPUSD4-207ENST00000532800 CYP2D6P10635 497 aa20.7■□□□□ 0.9
RPUSD4-207ENST00000532800 RGS2P41220 211 aa20.7■□□□□ 0.9
RPUSD4-207ENST00000532800 CACNB2Q08289 660 aaPredicted RBP20.7■□□□□ 0.9
RPUSD4-207ENST00000532800 APBA2Q99767 749 aa20.7■□□□□ 0.9
RPUSD4-207ENST00000532800 OGDHLQ9ULD0 1010 aa20.7■□□□□ 0.9
RPUSD4-207ENST00000532800 MYH8P13535 1937 aa20.7■□□□□ 0.9
RPUSD4-207ENST00000532800 BAZ2AQ9UIF9 1905 aaKnown RBP20.7■□□□□ 0.9
RPUSD4-207ENST00000532800 FRMPD3Q5JV73 1810 aa20.69■□□□□ 0.9
RPUSD4-207ENST00000532800 CCND3P30281 292 aaPredicted RBP20.69■□□□□ 0.9
RPUSD4-207ENST00000532800 C7orf61Q8IZ16 206 aa20.69■□□□□ 0.9
RPUSD4-207ENST00000532800 SLC44A5Q8NCS7 719 aa20.69■□□□□ 0.9
RPUSD4-207ENST00000532800 NBPF3Q9H094 633 aa20.69■□□□□ 0.9
RPUSD4-207ENST00000532800 RPAP3Q9H6T3 665 aaPredicted RBP20.69■□□□□ 0.9
RPUSD4-207ENST00000532800 ARMT1Q9H993 441 aa20.69■□□□□ 0.9
RPUSD4-207ENST00000532800 CWC22Q9HCG8 908 aaKnown RBP20.69■□□□□ 0.9
RPUSD4-207ENST00000532800 DCP1AQ9NPI6 582 aaPredicted RBP20.69■□□□□ 0.9
RPUSD4-207ENST00000532800 BTBD7Q9P203 1132 aa20.69■□□□□ 0.9
RPUSD4-207ENST00000532800 STAP2Q9UGK3 403 aa20.69■□□□□ 0.9
RPUSD4-207ENST00000532800 LAMA3Q16787 3333 aa20.68■□□□□ 0.9
RPUSD4-207ENST00000532800 A0A1W2PRG0 241 aa20.68■□□□□ 0.9
RPUSD4-207ENST00000532800 SPDYE16A6NNV3 312 aaPredicted RBP20.68■□□□□ 0.9
RPUSD4-207ENST00000532800 MPHOSPH10O00566 681 aaKnown RBP20.68■□□□□ 0.9
RPUSD4-207ENST00000532800 WDR78Q5VTH9 848 aa20.68■□□□□ 0.9
RPUSD4-207ENST00000532800 TRMT44Q8IYL2 757 aaKnown RBP20.68■□□□□ 0.9
RPUSD4-207ENST00000532800 BOLA2Q9H3K6 86 aa20.68■□□□□ 0.9
RPUSD4-207ENST00000532800 C11orf49Q9H6J7 331 aa20.68■□□□□ 0.9
RPUSD4-207ENST00000532800 MYH7P12883 1935 aa20.68■□□□□ 0.9
RPUSD4-207ENST00000532800 PRKAB2O43741 272 aa20.67■□□□□ 0.9
RPUSD4-207ENST00000532800 RAB11FIP3O75154 756 aa20.67■□□□□ 0.9
RPUSD4-207ENST00000532800 CHGBP05060 677 aa20.67■□□□□ 0.9
RPUSD4-207ENST00000532800 MAP2K5Q13163 448 aa20.67■□□□□ 0.9
RPUSD4-207ENST00000532800 LBX2Q6XYB7 198 aa20.67■□□□□ 0.9
RPUSD4-207ENST00000532800 PAG1Q9NWQ8 432 aa20.67■□□□□ 0.9
RPUSD4-207ENST00000532800 ZMYND8Q9ULU4 1186 aaPredicted RBP20.67■□□□□ 0.9
RPUSD4-207ENST00000532800 PFASO15067 1338 aa20.67■□□□□ 0.9
RPUSD4-207ENST00000532800 RLFQ13129 1914 aa20.66■□□□□ 0.9
RPUSD4-207ENST00000532800 SMIM22K7EJ46 135 aa20.66■□□□□ 0.9
RPUSD4-207ENST00000532800 ADD2P35612 726 aa20.66■□□□□ 0.9
RPUSD4-207ENST00000532800 CCNA1P78396 465 aa20.66■□□□□ 0.9
RPUSD4-207ENST00000532800 CLEC10AQ8IUN9 316 aa20.66■□□□□ 0.9
RPUSD4-207ENST00000532800 DYNLL2Q96FJ2 89 aa20.66■□□□□ 0.9
RPUSD4-207ENST00000532800 FLRT1Q9NZU1 646 aa20.66■□□□□ 0.9
RPUSD4-207ENST00000532800 A0A0G2JMZ2 1700 aa20.66■□□□□ 0.9
RPUSD4-207ENST00000532800 MBD4O95243 580 aa20.65■□□□□ 0.9
RPUSD4-207ENST00000532800 PTPREP23469 700 aa20.65■□□□□ 0.9
RPUSD4-207ENST00000532800 LHX8Q68G74 356 aa20.65■□□□□ 0.9
RPUSD4-207ENST00000532800 CYP2D7A0A087X1C5 515 aa20.64■□□□□ 0.89
RPUSD4-207ENST00000532800 SOX1O00570 391 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms