RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678	XAGE2	Q96GT9	111 aa		9.85	□□□□□ -0.83
PUM1-223	ENST00000532678	ZDHHC15	Q96MV8	337 aa		9.85	□□□□□ -0.83
PUM1-223	ENST00000532678	IL1RAPL2	Q9NP60	686 aa		9.85	□□□□□ -0.83
PUM1-223	ENST00000532678	GPR108	Q9NPR9	543 aa		9.85	□□□□□ -0.83
PUM1-223	ENST00000532678	DAGLA	Q9Y4D2	1042 aa		9.85	□□□□□ -0.83
PUM1-223	ENST00000532678	CSAD	Q9Y600	493 aa		9.85	□□□□□ -0.83
PUM1-223	ENST00000532678	MYH2	Q9UKX2	1941 aa		9.85	□□□□□ -0.83
PUM1-223	ENST00000532678	RAB11FIP3	O75154	756 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	DXO	O77932	396 aa	Known RBP	9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	MYC	P01106	439 aa	Predicted RBP	9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	INPP5B	P32019	993 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	INHBE	P58166	350 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	TCP10	Q12799	353 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	NFIA	Q12857	509 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	PPP2R2D	Q66LE6	453 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	CCDC102B	Q68D86	513 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	MIGA2	Q7L4E1	593 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	AACS	Q86V21	672 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	ANKLE1	Q8NAG6	615 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	KIF1BP	Q96EK5	621 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	ERO1A	Q96HE7	468 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	DBNDD2	Q9BQY9	259 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	ARHGAP39	Q9C0H5	1083 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	BCL11A	Q9H165	835 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	EFCC1	Q9HA90	598 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	TLR7	Q9NYK1	1049 aa	Known RBP	9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	TMOD2	Q9NZR1	351 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	PTPN22	Q9Y2R2	807 aa		9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	KIAA0100	Q14667	2235 aa	Known RBP	9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	RPAP1	Q9BWH6	1393 aa	Predicted RBP	9.84	□□□□□ -0.83
PUM1-223	ENST00000532678	MAST3	O60307	1309 aa		9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	UNCX	A6NJT0	531 aa		9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	BTBD19	C9JJ37	291 aa		9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	S1PR4	O95977	384 aa		9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	SLURP2	P0DP57	97 aa		9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	HDLBP	Q00341	1268 aa	Known RBP	9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	SP3	Q02447	781 aa		9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	HDAC1	Q13547	482 aa	Predicted RBP	9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	RASGRF1	Q13972	1273 aa		9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	GORAB	Q5T7V8	394 aa		9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	OTUD7B	Q6GQQ9	843 aa		9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	EAF2	Q96CJ1	260 aa	Predicted RBP	9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	LRRCC1	Q9C099	1032 aa		9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	CCDC8	Q9H0W5	538 aa	Predicted RBP	9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	DCTPP1	Q9H773	170 aa		9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	GNL3L	Q9NVN8	582 aa	Known RBP	9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	DBNL	Q9UJU6	430 aa	Known RBP	9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	PTCH2	Q9Y6C5	1203 aa		9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	MAST2	Q6P0Q8	1798 aa		9.83	□□□□□ -0.84
PUM1-223	ENST00000532678	CENPF	P49454	3210 aa		9.82	□□□□□ -0.84
PUM1-223	ENST00000532678	RNF223	E7ERA6	249 aa		9.82	□□□□□ -0.84
PUM1-223	ENST00000532678	SMARCA5	O60264	1052 aa	Predicted RBP	9.82	□□□□□ -0.84
PUM1-223	ENST00000532678	GTF2A2	P52657	109 aa		9.82	□□□□□ -0.84
PUM1-223	ENST00000532678	TTC39A	Q5SRH9	613 aa		9.82	□□□□□ -0.84
PUM1-223	ENST00000532678	CDC42EP5	Q6NZY7	148 aa		9.82	□□□□□ -0.84
PUM1-223	ENST00000532678	ZFPM1	Q8IX07	1006 aa		9.82	□□□□□ -0.84
PUM1-223	ENST00000532678	CLASRP	Q8N2M8	674 aa	Known RBP	9.82	□□□□□ -0.84
PUM1-223	ENST00000532678	SYMPK	Q92797	1274 aa	Known RBP	9.82	□□□□□ -0.84
PUM1-223	ENST00000532678	POLR3E	Q9NVU0	708 aa		9.82	□□□□□ -0.84
PUM1-223	ENST00000532678	BRCA2	P51587	3418 aa		9.82	□□□□□ -0.84
PUM1-223	ENST00000532678	DOCK1	Q14185	1865 aa		9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	IFIT2	P09913	472 aa	Known RBP	9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	JUND	P17535	347 aa		9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	EN2	P19622	333 aa	Predicted RBP	9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	ARID4A	P29374	1257 aa	Predicted RBP	9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	PPIL2	Q13356	520 aa		9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	CCDC158	Q5M9N0	1113 aa		9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	HHIPL2	Q6UWX4	724 aa		9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	FAM83A	Q86UY5	434 aa		9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	ERO1B	Q86YB8	467 aa		9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	WDR66	Q8TBY9	1149 aa		9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	PCMTD1	Q96MG8	357 aa	Predicted RBP	9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	ZNF341	Q9BYN7	854 aa		9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	ZFYVE28	Q9HCC9	887 aa		9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	DENND2A	Q9ULE3	1009 aa		9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	PTPRF	P10586	1907 aa		9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	PDS5A	Q29RF7	1337 aa	Known RBP	9.81	□□□□□ -0.84
PUM1-223	ENST00000532678	PHIP	Q8WWQ0	1821 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	RFX7	Q2KHR2	1363 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	ATRNL1	Q5VV63	1379 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	IGHD	P01880	384 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	LDHB	P07195	334 aa	Known RBP	9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	UQCRFS1P1	P0C7P4	283 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	CETP	P11597	493 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	CTGF	P29279	349 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	MCAM	P43121	646 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	QPCT	Q16769	361 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	DCAF15	Q66K64	600 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	PI16	Q6UXB8	463 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	CCDC84	Q86UT8	332 aa	Predicted RBP	9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	PRR7	Q8TB68	274 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	SH3TC2	Q8TF17	1288 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	FAM151A	Q8WW52	585 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	ARMC5	Q96C12	935 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	GCC1	Q96CN9	775 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	RWDD1	Q9H446	243 aa	Predicted RBP	9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	USP40	Q9NVE5	1235 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	CPA4	Q9UI42	421 aa		9.8	□□□□□ -0.84
PUM1-223	ENST00000532678	SUGT1	Q9Y2Z0	365 aa		9.8	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms