RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 MICU3Q86XE3 530 aa25.7■■□□□ 1.71
PACSIN3-209ENST00000532457 SMC1BQ8NDV3 1235 aa25.7■■□□□ 1.71
PACSIN3-209ENST00000532457 RBM46Q8TBY0 533 aaKnown RBP25.7■■□□□ 1.71
PACSIN3-209ENST00000532457 TMEM39BQ9GZU3 492 aa25.7■■□□□ 1.71
PACSIN3-209ENST00000532457 DEFB129Q9H1M3 183 aa25.7■■□□□ 1.71
PACSIN3-209ENST00000532457 AKR1B1P15121 316 aa25.7■■□□□ 1.7
PACSIN3-209ENST00000532457 IFIT1BQ5T764 474 aaKnown RBP25.7■■□□□ 1.7
PACSIN3-209ENST00000532457 FOXP4Q8IVH2 680 aaPredicted RBP25.7■■□□□ 1.7
PACSIN3-209ENST00000532457 SMARCC2Q8TAQ2 1214 aa25.7■■□□□ 1.7
PACSIN3-209ENST00000532457 SWAP70Q9UH65 585 aa25.7■■□□□ 1.7
PACSIN3-209ENST00000532457 ZNF654Q8IZM8 581 aa25.69■■□□□ 1.7
PACSIN3-209ENST00000532457 ANKS1AQ92625 1134 aa25.69■■□□□ 1.7
PACSIN3-209ENST00000532457 POLR2AP24928 1970 aaKnown RBP25.69■■□□□ 1.7
PACSIN3-209ENST00000532457 NT5C2P49902 561 aa25.68■■□□□ 1.7
PACSIN3-209ENST00000532457 METAP2P50579 478 aaKnown RBP eCLIP25.68■■□□□ 1.7
PACSIN3-209ENST00000532457 RASA3Q14644 834 aa25.68■■□□□ 1.7
PACSIN3-209ENST00000532457 SHROOM1Q2M3G4 852 aaPredicted RBP25.68■■□□□ 1.7
PACSIN3-209ENST00000532457 DDX11Q96FC9 970 aa25.68■■□□□ 1.7
PACSIN3-209ENST00000532457 LLPHQ9BRT6 129 aaKnown RBP25.68■■□□□ 1.7
PACSIN3-209ENST00000532457 RAB3GAP1Q15042 981 aa25.67■■□□□ 1.7
PACSIN3-209ENST00000532457 CSRNP1Q96S65 589 aa25.67■■□□□ 1.7
PACSIN3-209ENST00000532457 COL2A1P02458 1487 aaPredicted RBP25.67■■□□□ 1.7
PACSIN3-209ENST00000532457 RRP1BQ14684 758 aaKnown RBP25.67■■□□□ 1.7
PACSIN3-209ENST00000532457 TATDN1Q6P1N9 297 aa25.67■■□□□ 1.7
PACSIN3-209ENST00000532457 USP48Q86UV5 1035 aa25.67■■□□□ 1.7
PACSIN3-209ENST00000532457 DGKHQ86XP1 1220 aa25.67■■□□□ 1.7
PACSIN3-209ENST00000532457 CRACR2BQ8N4Y2 399 aaPredicted RBP25.67■■□□□ 1.7
PACSIN3-209ENST00000532457 FDPSP14324 419 aaKnown RBP25.66■■□□□ 1.7
PACSIN3-209ENST00000532457 SYT1P21579 422 aa25.66■■□□□ 1.7
PACSIN3-209ENST00000532457 TROAPQ12815 778 aa25.66■■□□□ 1.7
PACSIN3-209ENST00000532457 GLIS2Q9BZE0 524 aaPredicted RBP25.66■■□□□ 1.7
PACSIN3-209ENST00000532457 IGKV6D-41A0A0C4DH26 115 aa25.65■■□□□ 1.7
PACSIN3-209ENST00000532457 PTPDC1A2A3K4 754 aa25.65■■□□□ 1.7
PACSIN3-209ENST00000532457 GOLGA8AA7E2F4 631 aa25.65■■□□□ 1.7
PACSIN3-209ENST00000532457 NTRK3Q16288 839 aa25.65■■□□□ 1.7
PACSIN3-209ENST00000532457 NUP133Q8WUM0 1156 aa25.65■■□□□ 1.7
PACSIN3-209ENST00000532457 CEP95Q96GE4 821 aa25.65■■□□□ 1.7
PACSIN3-209ENST00000532457 NOVP48745 357 aa25.65■■□□□ 1.7
PACSIN3-209ENST00000532457 JAG1P78504 1218 aa25.65■■□□□ 1.7
PACSIN3-209ENST00000532457 FSTL1Q12841 308 aa25.65■■□□□ 1.7
PACSIN3-209ENST00000532457 SYNE3Q6ZMZ3 975 aa25.65■■□□□ 1.7
PACSIN3-209ENST00000532457 FANCBQ8NB91 859 aa25.65■■□□□ 1.7
PACSIN3-209ENST00000532457 ADM5C9JUS6 153 aa25.64■■□□□ 1.7
PACSIN3-209ENST00000532457 FOXD4L5Q5VV16 416 aaPredicted RBP25.64■■□□□ 1.7
PACSIN3-209ENST00000532457 CLEC10AQ8IUN9 316 aa25.64■■□□□ 1.7
PACSIN3-209ENST00000532457 FOXD4L4Q8WXT5 416 aaPredicted RBP25.64■■□□□ 1.7
PACSIN3-209ENST00000532457 TNPO1Q92973 898 aaKnown RBP25.64■■□□□ 1.7
PACSIN3-209ENST00000532457 TMEM47Q9BQJ4 181 aa25.64■■□□□ 1.7
PACSIN3-209ENST00000532457 NID2Q14112 1375 aa25.63■■□□□ 1.69
PACSIN3-209ENST00000532457 NUCB2P80303 420 aa25.63■■□□□ 1.69
PACSIN3-209ENST00000532457 HOOK2Q96ED9 719 aa25.63■■□□□ 1.69
PACSIN3-209ENST00000532457 TEPSINQ96N21 525 aa25.63■■□□□ 1.69
PACSIN3-209ENST00000532457 BRD1O95696 1058 aa25.63■■□□□ 1.69
PACSIN3-209ENST00000532457 SUPT20HL1Q3ZLR7 823 aa25.63■■□□□ 1.69
PACSIN3-209ENST00000532457 CATIPQ7Z7H3 387 aa25.63■■□□□ 1.69
PACSIN3-209ENST00000532457 MTMR4Q9NYA4 1195 aa25.63■■□□□ 1.69
PACSIN3-209ENST00000532457 PLIN4Q96Q06 1357 aa25.62■■□□□ 1.69
PACSIN3-209ENST00000532457 ITGBL1O95965 494 aaPredicted RBP25.62■■□□□ 1.69
PACSIN3-209ENST00000532457 NF2P35240 595 aa25.62■■□□□ 1.69
PACSIN3-209ENST00000532457 CERKLQ49MI3 558 aaPredicted RBP25.62■■□□□ 1.69
PACSIN3-209ENST00000532457 CCDC178Q5BJE1 867 aa25.62■■□□□ 1.69
PACSIN3-209ENST00000532457 CMTR1Q8N1G2 835 aaKnown RBP25.62■■□□□ 1.69
PACSIN3-209ENST00000532457 STX8Q9UNK0 236 aa25.62■■□□□ 1.69
PACSIN3-209ENST00000532457 MYH8P13535 1937 aa25.61■■□□□ 1.69
PACSIN3-209ENST00000532457 DHX16O60231 1041 aaKnown RBP25.61■■□□□ 1.69
PACSIN3-209ENST00000532457 RCAN1P53805 252 aa25.61■■□□□ 1.69
PACSIN3-209ENST00000532457 RTN1Q16799 776 aa25.61■■□□□ 1.69
PACSIN3-209ENST00000532457 MIGA2Q7L4E1 593 aa25.61■■□□□ 1.69
PACSIN3-209ENST00000532457 LARP1BQ659C4 914 aaKnown RBP25.6■■□□□ 1.69
PACSIN3-209ENST00000532457 PNMA1Q8ND90 353 aa25.6■■□□□ 1.69
PACSIN3-209ENST00000532457 PHKBQ93100 1093 aa25.6■■□□□ 1.69
PACSIN3-209ENST00000532457 CCDC17Q96LX7 622 aa25.6■■□□□ 1.69
PACSIN3-209ENST00000532457 KAT14Q9H8E8 782 aa25.6■■□□□ 1.69
PACSIN3-209ENST00000532457 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.6■■□□□ 1.69
PACSIN3-209ENST00000532457 UBE2Q2LH0YL09 131 aa25.6■■□□□ 1.69
PACSIN3-209ENST00000532457 CPLX1O14810 134 aa25.6■■□□□ 1.69
PACSIN3-209ENST00000532457 STX6O43752 255 aa25.6■■□□□ 1.69
PACSIN3-209ENST00000532457 GUCY1A2P33402 732 aa25.6■■□□□ 1.69
PACSIN3-209ENST00000532457 CHMP4CQ96CF2 233 aa25.6■■□□□ 1.69
PACSIN3-209ENST00000532457 CDCA5Q96FF9 252 aa25.6■■□□□ 1.69
PACSIN3-209ENST00000532457 TRIM34Q9BYJ4 488 aa25.6■■□□□ 1.69
PACSIN3-209ENST00000532457 MPHOSPH10O00566 681 aaKnown RBP25.59■■□□□ 1.69
PACSIN3-209ENST00000532457 DDAH1O94760 285 aa25.59■■□□□ 1.69
PACSIN3-209ENST00000532457 GDF11O95390 407 aa25.59■■□□□ 1.69
PACSIN3-209ENST00000532457 NBPF11Q86T75 865 aa25.59■■□□□ 1.69
PACSIN3-209ENST00000532457 HERC5Q9UII4 1024 aaKnown RBP25.59■■□□□ 1.69
PACSIN3-209ENST00000532457 TAOK2Q9UL54 1235 aa25.59■■□□□ 1.69
PACSIN3-209ENST00000532457 MTMR6Q9Y217 621 aa25.59■■□□□ 1.69
PACSIN3-209ENST00000532457 MAP3K10Q02779 954 aa25.58■■□□□ 1.69
PACSIN3-209ENST00000532457 PRAMEF18Q5VWM3 479 aa25.58■■□□□ 1.69
PACSIN3-209ENST00000532457 SIAH1Q8IUQ4 282 aa25.58■■□□□ 1.69
PACSIN3-209ENST00000532457 CCDC82Q8N4S0 544 aa25.58■■□□□ 1.69
PACSIN3-209ENST00000532457 CHAMP1Q96JM3 812 aa25.58■■□□□ 1.69
PACSIN3-209ENST00000532457 GREB1LQ9C091 1923 aaPredicted RBP25.58■■□□□ 1.69
PACSIN3-209ENST00000532457 TRAF5O00463 557 aa25.58■■□□□ 1.68
PACSIN3-209ENST00000532457 TBC1D12O60347 775 aa25.58■■□□□ 1.68
PACSIN3-209ENST00000532457 HMGN5P82970 282 aaKnown RBP25.58■■□□□ 1.68
PACSIN3-209ENST00000532457 FUT2Q10981 343 aa25.58■■□□□ 1.68
PACSIN3-209ENST00000532457 NBPF12Q5TAG4 269 aaPredicted RBP25.58■■□□□ 1.68
PACSIN3-209ENST00000532457 RASGRP2Q7LDG7 609 aa25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms