RNA–Protein interactions for RNA: ENST00000532392.1

CTSB-224, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-224ENST00000532392 TTC22Q5TAA0 569 aa17.33■□□□□ 0.36
CTSB-224ENST00000532392 OTOP1Q7RTM1 612 aa17.33■□□□□ 0.36
CTSB-224ENST00000532392 ACER1Q8TDN7 264 aa17.33■□□□□ 0.36
CTSB-224ENST00000532392 SMCR8Q8TEV9 937 aaPredicted RBP17.33■□□□□ 0.36
CTSB-224ENST00000532392 MKNK2Q9HBH9 465 aa17.33■□□□□ 0.36
CTSB-224ENST00000532392 TRIM17Q9Y577 477 aa17.33■□□□□ 0.36
CTSB-224ENST00000532392 HIP1O00291 1037 aa17.32■□□□□ 0.36
CTSB-224ENST00000532392 FOXP2O15409 715 aa17.32■□□□□ 0.36
CTSB-224ENST00000532392 HOXA7P31268 230 aaPredicted RBP17.32■□□□□ 0.36
CTSB-224ENST00000532392 USP14P54578 494 aa17.32■□□□□ 0.36
CTSB-224ENST00000532392 LACTBP83111 547 aaPredicted RBP17.32■□□□□ 0.36
CTSB-224ENST00000532392 KIF22Q14807 665 aa17.32■□□□□ 0.36
CTSB-224ENST00000532392 ZYXQ15942 572 aaKnown RBP17.32■□□□□ 0.36
CTSB-224ENST00000532392 VPS53Q5VIR6 699 aa17.32■□□□□ 0.36
CTSB-224ENST00000532392 STK11IPQ8N1F8 1099 aa17.32■□□□□ 0.36
CTSB-224ENST00000532392 C12orf42Q96LP6 360 aa17.32■□□□□ 0.36
CTSB-224ENST00000532392 ASCC2Q9H1I8 757 aaPredicted RBP17.32■□□□□ 0.36
CTSB-224ENST00000532392 EFCC1Q9HA90 598 aa17.32■□□□□ 0.36
CTSB-224ENST00000532392 ZNF287Q9HBT7 754 aa17.32■□□□□ 0.36
CTSB-224ENST00000532392 BCRP11274 1271 aa17.31■□□□□ 0.36
CTSB-224ENST00000532392 GSPT1P15170 499 aaKnown RBP17.31■□□□□ 0.36
CTSB-224ENST00000532392 RASA1P20936 1047 aa17.31■□□□□ 0.36
CTSB-224ENST00000532392 CAP1Q01518 475 aa17.31■□□□□ 0.36
CTSB-224ENST00000532392 ALX1Q15699 326 aa17.31■□□□□ 0.36
CTSB-224ENST00000532392 CENPQQ7L2Z9 268 aaPredicted RBP17.31■□□□□ 0.36
CTSB-224ENST00000532392 ZNF589Q86UQ0 364 aaPredicted RBP17.31■□□□□ 0.36
CTSB-224ENST00000532392 DIAPH3Q9NSV4 1193 aa17.31■□□□□ 0.36
CTSB-224ENST00000532392 LOC285556D6RIA3 1793 aa17.3■□□□□ 0.36
CTSB-224ENST00000532392 CCDC171Q6TFL3 1326 aa17.3■□□□□ 0.36
CTSB-224ENST00000532392 A0A1W2PRG0 241 aa17.3■□□□□ 0.36
CTSB-224ENST00000532392 SLC3A2P08195 630 aaKnown RBP17.3■□□□□ 0.36
CTSB-224ENST00000532392 MFAP1P55081 439 aaKnown RBP17.3■□□□□ 0.36
CTSB-224ENST00000532392 IRX3P78415 501 aaPredicted RBP17.3■□□□□ 0.36
CTSB-224ENST00000532392 ICA1Q05084 483 aa17.3■□□□□ 0.36
CTSB-224ENST00000532392 PPARAQ07869 468 aa17.3■□□□□ 0.36
CTSB-224ENST00000532392 FBXO46Q6PJ61 603 aaPredicted RBP17.3■□□□□ 0.36
CTSB-224ENST00000532392 CWC27Q6UX04 472 aaKnown RBP17.3■□□□□ 0.36
CTSB-224ENST00000532392 SIAH1Q8IUQ4 282 aa17.3■□□□□ 0.36
CTSB-224ENST00000532392 ZNF444Q8N0Y2 327 aaPredicted RBP17.3■□□□□ 0.36
CTSB-224ENST00000532392 HSPD1P10809 573 aaKnown RBP17.29■□□□□ 0.36
CTSB-224ENST00000532392 GCLCP48506 637 aaPredicted RBP17.29■□□□□ 0.36
CTSB-224ENST00000532392 PDE4BQ07343 736 aa17.29■□□□□ 0.36
CTSB-224ENST00000532392 ARHGAP39Q9C0H5 1083 aa17.29■□□□□ 0.36
CTSB-224ENST00000532392 KANSL2Q9H9L4 492 aa17.29■□□□□ 0.36
CTSB-224ENST00000532392 ARHGEF10LQ9HCE6 1279 aa17.29■□□□□ 0.36
CTSB-224ENST00000532392 USP17L15C9J2P7 530 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 USP17L13C9JLJ4 530 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 USP17L11C9JVI0 530 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 USP17L18D6R9N7 530 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 USP17L22D6RA61 530 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 USP17L17D6RBQ6 530 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 USP17L19D6RCP7 530 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 USP17L20D6RJB6 530 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 PRDM1O75626 825 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 GNRH1P01148 92 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 FGAP02671 866 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 NEFLP07196 543 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 VCAM1P19320 739 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 USP17L24Q0WX57 530 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 CLEC10AQ8IUN9 316 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 ANKRD13CQ8N6S4 541 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 P2RX7Q99572 595 aaKnown RBP17.28■□□□□ 0.36
CTSB-224ENST00000532392 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.28■□□□□ 0.36
CTSB-224ENST00000532392 ANAPC4Q9UJX5 808 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 PTPN22Q9Y2R2 807 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 TMX2Q9Y320 296 aa17.28■□□□□ 0.36
CTSB-224ENST00000532392 CAPN15O75808 1086 aa17.27■□□□□ 0.36
CTSB-224ENST00000532392 CENPBP07199 599 aaPredicted RBP17.27■□□□□ 0.36
CTSB-224ENST00000532392 EEF2P13639 858 aaKnown RBP17.27■□□□□ 0.36
CTSB-224ENST00000532392 CTGFP29279 349 aa17.27■□□□□ 0.36
CTSB-224ENST00000532392 PSMC4P43686 418 aa17.27■□□□□ 0.36
CTSB-224ENST00000532392 FAM110CQ1W6H9 321 aa17.27■□□□□ 0.36
CTSB-224ENST00000532392 CATSPERGQ6ZRH7 1159 aa17.27■□□□□ 0.36
CTSB-224ENST00000532392 SH2D4AQ9H788 454 aa17.27■□□□□ 0.36
CTSB-224ENST00000532392 HPS5Q9UPZ3 1129 aa17.27■□□□□ 0.36
CTSB-224ENST00000532392 MYH8P13535 1937 aa17.27■□□□□ 0.35
CTSB-224ENST00000532392 CCDC85CA6NKD9 419 aa17.26■□□□□ 0.35
CTSB-224ENST00000532392 ECM2O94769 699 aaPredicted RBP17.26■□□□□ 0.35
CTSB-224ENST00000532392 FMNL1O95466 1100 aaPredicted RBP17.26■□□□□ 0.35
CTSB-224ENST00000532392 FCGRTP55899 365 aa17.26■□□□□ 0.35
CTSB-224ENST00000532392 HERVK_113P62684 666 aa17.26■□□□□ 0.35
CTSB-224ENST00000532392 CTDSPL2Q05D32 466 aa17.26■□□□□ 0.35
CTSB-224ENST00000532392 CCDC136Q96JN2 1154 aa17.26■□□□□ 0.35
CTSB-224ENST00000532392 TRIM47Q96LD4 638 aa17.26■□□□□ 0.35
CTSB-224ENST00000532392 RPAP3Q9H6T3 665 aaPredicted RBP17.26■□□□□ 0.35
CTSB-224ENST00000532392 ZMYM6O95789 1325 aa17.25■□□□□ 0.35
CTSB-224ENST00000532392 HOXD10P28358 340 aa17.25■□□□□ 0.35
CTSB-224ENST00000532392 PRMT2P55345 433 aa17.25■□□□□ 0.35
CTSB-224ENST00000532392 ATP2B2Q01814 1243 aa17.25■□□□□ 0.35
CTSB-224ENST00000532392 GTF3C2Q8WUA4 911 aaPredicted RBP17.25■□□□□ 0.35
CTSB-224ENST00000532392 LPAR1Q92633 364 aa17.25■□□□□ 0.35
CTSB-224ENST00000532392 VCPKMTQ9H867 229 aa17.25■□□□□ 0.35
CTSB-224ENST00000532392 NYAP2Q9P242 653 aa17.25■□□□□ 0.35
CTSB-224ENST00000532392 MORF4L1Q9UBU8 362 aa17.25■□□□□ 0.35
CTSB-224ENST00000532392 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.25■□□□□ 0.356e-6■■□□□ 13.9
CTSB-224ENST00000532392 IGKV6D-41A0A0C4DH26 115 aa17.24■□□□□ 0.35
CTSB-224ENST00000532392 TSPY3P0CV98 308 aa17.24■□□□□ 0.35
CTSB-224ENST00000532392 TSPY8P0CW00 308 aa17.24■□□□□ 0.35
CTSB-224ENST00000532392 TFAP4Q01664 338 aa17.24■□□□□ 0.35
CTSB-224ENST00000532392 FAM47AQ5JRC9 791 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms