RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-209ENST00000532347 CYFIP1Q7L576 1253 aa11.3□□□□□ -0.6
KNL1-209ENST00000532347 GINM1Q9NU53 330 aa11.3□□□□□ -0.6
KNL1-209ENST00000532347 DHX29Q7Z478 1369 aaKnown RBP11.29□□□□□ -0.6
KNL1-209ENST00000532347 CCNB3Q8WWL7 1395 aa11.29□□□□□ -0.6
KNL1-209ENST00000532347 PREPP48147 710 aa11.29□□□□□ -0.6
KNL1-209ENST00000532347 ERVK-24P63145 666 aa11.29□□□□□ -0.6
KNL1-209ENST00000532347 CD163Q86VB7 1156 aa11.29□□□□□ -0.6
KNL1-209ENST00000532347 C2CD4AQ8NCU7 369 aaPredicted RBP11.29□□□□□ -0.6
KNL1-209ENST00000532347 FANCD2OSQ96PS1 177 aa11.29□□□□□ -0.6
KNL1-209ENST00000532347 CEP41Q9BYV8 373 aa11.29□□□□□ -0.6
KNL1-209ENST00000532347 BRMS1Q9HCU9 246 aa11.29□□□□□ -0.6
KNL1-209ENST00000532347 DISC1Q9NRI5 854 aa11.29□□□□□ -0.6
KNL1-209ENST00000532347 CFDP1Q9UEE9 299 aaPredicted RBP11.29□□□□□ -0.6
KNL1-209ENST00000532347 EFR3BQ9Y2G0 817 aa11.29□□□□□ -0.6
KNL1-209ENST00000532347 HIF3AQ9Y2N7 669 aa11.29□□□□□ -0.6
KNL1-209ENST00000532347 POLR3KQ9Y2Y1 108 aaPredicted RBP11.29□□□□□ -0.6
KNL1-209ENST00000532347 NEURL4Q96JN8 1562 aa11.28□□□□□ -0.6
KNL1-209ENST00000532347 MBD5Q9P267 1494 aa11.28□□□□□ -0.6
KNL1-209ENST00000532347 ATF4P18848 351 aaPredicted RBP11.28□□□□□ -0.6
KNL1-209ENST00000532347 RING1Q06587 406 aa11.28□□□□□ -0.6
KNL1-209ENST00000532347 PPM1JQ5JR12 505 aa11.28□□□□□ -0.6
KNL1-209ENST00000532347 DYMQ7RTS9 669 aa11.28□□□□□ -0.6
KNL1-209ENST00000532347 TXNRD3Q86VQ6 643 aa11.28□□□□□ -0.6
KNL1-209ENST00000532347 VPS37DQ86XT2 251 aa11.28□□□□□ -0.6
KNL1-209ENST00000532347 UBL7Q96S82 380 aaPredicted RBP11.28□□□□□ -0.6
KNL1-209ENST00000532347 SYNMO15061 1565 aa11.28□□□□□ -0.6
KNL1-209ENST00000532347 EHBP1L1Q8N3D4 1523 aa11.27□□□□□ -0.61
KNL1-209ENST00000532347 PRAMEF27A3QJZ7 478 aa11.27□□□□□ -0.61
KNL1-209ENST00000532347 C1QTNF9BB2RNN3 333 aa11.27□□□□□ -0.61
KNL1-209ENST00000532347 DNAJA1P31689 397 aaKnown RBP11.27□□□□□ -0.61
KNL1-209ENST00000532347 MCM4P33991 863 aa11.27□□□□□ -0.61
KNL1-209ENST00000532347 GSK3AP49840 483 aa11.27□□□□□ -0.61
KNL1-209ENST00000532347 ARID5AQ03989 594 aa11.27□□□□□ -0.61
KNL1-209ENST00000532347 KCNMA1Q12791 1236 aa11.27□□□□□ -0.61
KNL1-209ENST00000532347 THEMISQ8N1K5 641 aaPredicted RBP11.27□□□□□ -0.61
KNL1-209ENST00000532347 GMLQ99445 158 aa11.27□□□□□ -0.61
KNL1-209ENST00000532347 ATXN3LQ9H3M9 355 aa11.27□□□□□ -0.61
KNL1-209ENST00000532347 ACTL7BQ9Y614 415 aa11.27□□□□□ -0.61
KNL1-209ENST00000532347 TNRQ92752 1358 aa11.27□□□□□ -0.61
KNL1-209ENST00000532347 CEP162Q5TB80 1403 aa11.26□□□□□ -0.61
KNL1-209ENST00000532347 SART1O43290 800 aaKnown RBP11.26□□□□□ -0.61
KNL1-209ENST00000532347 GRIN3BO60391 1043 aa11.26□□□□□ -0.61
KNL1-209ENST00000532347 SOX9P48436 509 aa11.26□□□□□ -0.61
KNL1-209ENST00000532347 RASSF7Q02833 373 aa11.26□□□□□ -0.61
KNL1-209ENST00000532347 COL9A2Q14055 689 aaPredicted RBP11.26□□□□□ -0.61
KNL1-209ENST00000532347 ANKLE2Q86XL3 938 aa11.26□□□□□ -0.61
KNL1-209ENST00000532347 SEC16BQ96JE7 1060 aa11.26□□□□□ -0.61
KNL1-209ENST00000532347 MEGF10Q96KG7 1140 aa11.26□□□□□ -0.61
KNL1-209ENST00000532347 GSX1Q9H4S2 264 aaPredicted RBP11.26□□□□□ -0.61
KNL1-209ENST00000532347 PICK1Q9NRD5 415 aa11.26□□□□□ -0.61
KNL1-209ENST00000532347 ZC3H13Q5T200 1668 aaKnown RBP11.26□□□□□ -0.61
KNL1-209ENST00000532347 VWDEQ8N2E2 1590 aa11.25□□□□□ -0.61
KNL1-209ENST00000532347 NASPP49321 788 aaPredicted RBP11.25□□□□□ -0.61
KNL1-209ENST00000532347 DZIP1LQ8IYY4 767 aaKnown RBP11.25□□□□□ -0.61
KNL1-209ENST00000532347 FAM46AQ96IP4 442 aaKnown RBP11.25□□□□□ -0.61
KNL1-209ENST00000532347 FAM105AQ9NUU6 356 aa11.25□□□□□ -0.61
KNL1-209ENST00000532347 CORINQ9Y5Q5 1042 aa11.25□□□□□ -0.61
KNL1-209ENST00000532347 TACC3Q9Y6A5 838 aa11.25□□□□□ -0.61
KNL1-209ENST00000532347 MTUS2Q5JR59 1369 aa11.25□□□□□ -0.61
KNL1-209ENST00000532347 NTF4P34130 210 aa11.24□□□□□ -0.61
KNL1-209ENST00000532347 ASPAP45381 313 aa11.24□□□□□ -0.61
KNL1-209ENST00000532347 ZNF165P49910 485 aa11.24□□□□□ -0.61
KNL1-209ENST00000532347 HNRNPMP52272 730 aaKnown RBP eCLIP11.24□□□□□ -0.61
KNL1-209ENST00000532347 CLCQ05315 142 aa11.24□□□□□ -0.61
KNL1-209ENST00000532347 TTLL4Q14679 1199 aa11.24□□□□□ -0.61
KNL1-209ENST00000532347 ZBTB37Q5TC79 503 aa11.24□□□□□ -0.61
KNL1-209ENST00000532347 GGT6Q6P531 493 aa11.24□□□□□ -0.61
KNL1-209ENST00000532347 GK5Q6ZS86 529 aa11.24□□□□□ -0.61
KNL1-209ENST00000532347 REXO1Q8N1G1 1221 aaKnown RBP11.24□□□□□ -0.61
KNL1-209ENST00000532347 RNF214Q8ND24 703 aa11.24□□□□□ -0.61
KNL1-209ENST00000532347 PRKAG2Q9UGJ0 569 aa11.24□□□□□ -0.61
KNL1-209ENST00000532347 PCDHB14Q9Y5E9 798 aa11.24□□□□□ -0.61
KNL1-209ENST00000532347 MIA2Q96PC5 1412 aa11.24□□□□□ -0.61
KNL1-209ENST00000532347 CCDC141Q6ZP82 1450 aa11.24□□□□□ -0.61
KNL1-209ENST00000532347 TIAM1Q13009 1591 aa11.24□□□□□ -0.61
KNL1-209ENST00000532347 UGGT1Q9NYU2 1555 aa11.24□□□□□ -0.61
KNL1-209ENST00000532347 RNF17Q9BXT8 1623 aaKnown RBP11.24□□□□□ -0.61
KNL1-209ENST00000532347 FANCGO15287 622 aa11.23□□□□□ -0.61
KNL1-209ENST00000532347 GAS2O43903 313 aaKnown RBP11.23□□□□□ -0.61
KNL1-209ENST00000532347 NEFMP07197 916 aa11.23□□□□□ -0.61
KNL1-209ENST00000532347 HCLS1P14317 486 aaPredicted RBP11.23□□□□□ -0.61
KNL1-209ENST00000532347 GRK4P32298 578 aa11.23□□□□□ -0.61
KNL1-209ENST00000532347 SREK1Q8WXA9 508 aaKnown RBP11.23□□□□□ -0.61
KNL1-209ENST00000532347 WNT10AQ9GZT5 417 aa11.23□□□□□ -0.61
KNL1-209ENST00000532347 PRR36Q9H6K5 1346 aa11.23□□□□□ -0.61
KNL1-209ENST00000532347 ARHGEF5Q12774 1597 aa11.23□□□□□ -0.61
KNL1-209ENST00000532347 NPHP4O75161 1426 aaPredicted RBP11.22□□□□□ -0.61
KNL1-209ENST00000532347 FGRP09769 529 aa11.22□□□□□ -0.61
KNL1-209ENST00000532347 ETF1P62495 437 aaKnown RBP11.22□□□□□ -0.61
KNL1-209ENST00000532347 MCF2L2Q86YR7 1114 aa11.22□□□□□ -0.61
KNL1-209ENST00000532347 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.22□□□□□ -0.615e-7■■■■□ 20.9
KNL1-209ENST00000532347 TANGO6Q9C0B7 1094 aa11.22□□□□□ -0.61
KNL1-209ENST00000532347 EHMT1Q9H9B1 1298 aa11.22□□□□□ -0.61
KNL1-209ENST00000532347 PIDD1Q9HB75 910 aa11.22□□□□□ -0.61
KNL1-209ENST00000532347 PPT2Q9UMR5 302 aa11.22□□□□□ -0.61
KNL1-209ENST00000532347 IQGAP1P46940 1657 aa11.21□□□□□ -0.61
KNL1-209ENST00000532347 EIF2AK4Q9P2K8 1649 aaKnown RBP11.21□□□□□ -0.61
KNL1-209ENST00000532347 ATE1O95260 518 aa11.21□□□□□ -0.61
KNL1-209ENST00000532347 HTR3BO95264 441 aa11.21□□□□□ -0.61
KNL1-209ENST00000532347 HSPA1LP34931 641 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms