RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 ACRBPQ8NEB7 543 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 GCC1Q96CN9 775 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 TBC1D31Q96DN5 1066 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 EXOC2Q96KP1 924 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 LRGUKQ96M69 825 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 TPCN1Q9ULQ1 816 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 GPR52Q9Y2T5 361 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 hCG_1642624A0A1W2PR95 340 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 CHL1O00533 1208 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 TLR3O15455 904 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 DDX3YO15523 660 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 ZKSCAN1P17029 563 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 LIG3P49916 1009 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 SNX16P57768 344 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 CTC1Q2NKJ3 1217 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 SLC10A5Q5PT55 438 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 VPS53Q5VIR6 699 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 ANKRD13BQ86YJ7 626 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 SLC41A1Q8IVJ1 513 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 FLCNQ8NFG4 579 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 SNX29Q8TEQ0 813 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 SLC4A9Q96Q91 983 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 SLC12A5Q9H2X9 1139 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 KLK14Q9P0G3 267 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 ZNRF3Q9ULT6 936 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 MAFFQ9ULX9 164 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 SNUPNO95149 360 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 G3BP1Q13283 466 aaKnown RBP eCLIP6.17□□□□□ -1.421e-11■■■□□ 15.6
ECHDC1-222ENST00000531967 PCBP1Q15365 356 aaKnown RBP eCLIP6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 PDCD2Q16342 344 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 SLC10A6Q3KNW5 377 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 LRRC47Q8N1G4 583 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 KCT2Q8NC54 265 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 FBXO27Q8NI29 283 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 ZBTB10Q96DT7 871 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 CRB3Q9BUF7 120 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 LRRC3Q9BY71 257 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 SUV39H2Q9H5I1 410 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 TBC1D22BQ9NU19 505 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 MRGBPQ9NV56 204 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 SNX5Q9Y5X3 404 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 ROBO2Q9HCK4 1378 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 FBXO24O75426 580 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 GFPT2O94808 682 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 ARIH2O95376 493 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 FOSL1P15407 271 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 PTPREP23469 700 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 CHKAP35790 457 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 MPP1Q00013 466 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 MAP7Q14244 749 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 FAAH2Q6GMR7 532 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 TREML1Q86YW5 311 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 CPA6Q8N4T0 437 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 MPNDQ8N594 471 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 SLC10A4Q96EP9 437 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 ISCA1Q9BUE6 129 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 ARHGAP28Q9P2N2 729 aa6.17□□□□□ -1.42
ECHDC1-222ENST00000531967 PLOD3O60568 738 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 NPTXRO95502 500 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 POLR3DP05423 398 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 RAC2P15153 192 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 KCNA2P16389 499 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 SEPT7Q16181 437 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 TTC30AQ86WT1 665 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 BRSK2Q8IWQ3 736 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 ZNF513Q8N8E2 541 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 RBBP8NLQ8NC74 664 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 ATP6V1E2Q96A05 226 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 SH3KBP1Q96B97 665 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 TTC1Q99614 292 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 SUCOQ9UBS9 1254 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 PHF20L1A8MW92 1017 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 FAM155AB1AL88 458 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 M0R3H8 397 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 CD4P01730 458 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 NUDT7P0C024 238 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 CAP2P40123 477 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 GRK6P43250 576 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 ZNF165P49910 485 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 FXR2P51116 673 aaKnown RBP eCLIP6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 HDGFP51858 240 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 ATN1P54259 1190 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 KRT83P78385 493 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 KMT5BQ4FZB7 885 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 CCDC158Q5M9N0 1113 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 SPATA1Q5VX52 437 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 ZCCHC8Q6NZY4 707 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 ZNF449Q6P9G9 518 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 POTEAQ6S8J7 498 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 SPOCD1Q6ZMY3 1216 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 SV2BQ7L1I2 683 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 LSMEM1Q8N8F7 131 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 ARL10Q8N8L6 244 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 NSUN6Q8TEA1 469 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 TRIM63Q969Q1 353 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 THAP11Q96EK4 314 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 SGCZQ96LD1 299 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 ETNK1Q9HBU6 452 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 AAASQ9NRG9 546 aa6.16□□□□□ -1.42
ECHDC1-222ENST00000531967 PDP2Q9P2J9 529 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms