RNA–Protein interactions for RNA: ENST00000531919.1

PATL1-202, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

TSL 5

Gene PATL1, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-202ENST00000531919 RNF34Q969K3 372 aa4.75□□□□□ -1.65
PATL1-202ENST00000531919 CCDC74BQ96LY2 380 aa4.75□□□□□ -1.65
PATL1-202ENST00000531919 BRMS1Q9HCU9 246 aa4.75□□□□□ -1.65
PATL1-202ENST00000531919 LMCD1Q9NZU5 365 aa4.75□□□□□ -1.65
PATL1-202ENST00000531919 ST14Q9Y5Y6 855 aa4.75□□□□□ -1.65
PATL1-202ENST00000531919 CAPN6Q9Y6Q1 641 aa4.75□□□□□ -1.65
PATL1-202ENST00000531919 PITPNM2Q9BZ72 1349 aa4.74□□□□□ -1.65
PATL1-202ENST00000531919 SLC22A31A6NKX4 558 aa4.74□□□□□ -1.65
PATL1-202ENST00000531919 CHURC1-FNTBB4DL54 471 aa4.74□□□□□ -1.65
PATL1-202ENST00000531919 CRKP46108 304 aa4.74□□□□□ -1.65
PATL1-202ENST00000531919 ZNF165P49910 485 aa4.74□□□□□ -1.65
PATL1-202ENST00000531919 APOBRQ0VD83 1088 aa4.74□□□□□ -1.65
PATL1-202ENST00000531919 PLCL1Q15111 1095 aa4.74□□□□□ -1.65
PATL1-202ENST00000531919 SLC23A3Q6PIS1 610 aa4.74□□□□□ -1.65
PATL1-202ENST00000531919 THAP5Q7Z6K1 395 aa4.74□□□□□ -1.65
PATL1-202ENST00000531919 USP48Q86UV5 1035 aa4.74□□□□□ -1.65
PATL1-202ENST00000531919 KIAA0825Q8IV33 1275 aa4.74□□□□□ -1.65
PATL1-202ENST00000531919 EAF1Q96JC9 268 aaPredicted RBP4.74□□□□□ -1.65
PATL1-202ENST00000531919 HSPA12BQ96MM6 686 aa4.74□□□□□ -1.65
PATL1-202ENST00000531919 SPON2Q9BUD6 331 aa4.74□□□□□ -1.65
PATL1-202ENST00000531919 SEMA3GQ9NS98 782 aa4.74□□□□□ -1.65
PATL1-202ENST00000531919 UBP1Q9NZI7 540 aa4.74□□□□□ -1.65
PATL1-202ENST00000531919 UNCXA6NJT0 531 aa4.73□□□□□ -1.65
PATL1-202ENST00000531919 CBX7O95931 251 aa4.73□□□□□ -1.65
PATL1-202ENST00000531919 RECKO95980 971 aa4.73□□□□□ -1.65
PATL1-202ENST00000531919 CD96P40200 585 aa4.73□□□□□ -1.65
PATL1-202ENST00000531919 TNK2Q07912 1038 aa4.73□□□□□ -1.65
PATL1-202ENST00000531919 ZNF792Q3KQV3 632 aa4.73□□□□□ -1.65
PATL1-202ENST00000531919 SEZ6Q53EL9 994 aa4.73□□□□□ -1.65
PATL1-202ENST00000531919 CDCP2Q5VXM1 449 aa4.73□□□□□ -1.65
PATL1-202ENST00000531919 PI4K2BQ8TCG2 481 aa4.73□□□□□ -1.65
PATL1-202ENST00000531919 NKD1Q969G9 470 aa4.73□□□□□ -1.65
PATL1-202ENST00000531919 MRRFQ96E11 262 aaKnown RBP4.73□□□□□ -1.65
PATL1-202ENST00000531919 GMIPQ9P107 970 aa4.73□□□□□ -1.65
PATL1-202ENST00000531919 KCNH3Q9ULD8 1083 aa4.73□□□□□ -1.65
PATL1-202ENST00000531919 CCDC9Q9Y3X0 531 aaKnown RBP4.73□□□□□ -1.65
PATL1-202ENST00000531919 PCDHB14Q9Y5E9 798 aa4.73□□□□□ -1.65
PATL1-202ENST00000531919 RGS13O14921 159 aa4.72□□□□□ -1.65
PATL1-202ENST00000531919 DNAJA2O60884 412 aa4.72□□□□□ -1.65
PATL1-202ENST00000531919 RNASE1P07998 156 aaKnown RBP4.72□□□□□ -1.65
PATL1-202ENST00000531919 JUNBP17275 347 aaPredicted RBP4.72□□□□□ -1.65
PATL1-202ENST00000531919 ITGB5P18084 799 aa4.72□□□□□ -1.65
PATL1-202ENST00000531919 IKZF1Q13422 519 aa4.72□□□□□ -1.65
PATL1-202ENST00000531919 LRRFIP1Q32MZ4 808 aaKnown RBP4.72□□□□□ -1.65
PATL1-202ENST00000531919 CDKAL1Q5VV42 579 aa4.72□□□□□ -1.65
PATL1-202ENST00000531919 RNF141Q8WVD5 230 aa4.72□□□□□ -1.65
PATL1-202ENST00000531919 Q96M66 194 aa4.72□□□□□ -1.65
PATL1-202ENST00000531919 MBNL3Q9NUK0 354 aaKnown RBP4.72□□□□□ -1.65
PATL1-202ENST00000531919 KLHL3Q9UH77 587 aa4.72□□□□□ -1.65
PATL1-202ENST00000531919 DDX41Q9UJV9 622 aaKnown RBP4.72□□□□□ -1.65
PATL1-202ENST00000531919 PAX4O43316 350 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 SRFP11831 508 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 GBP1P32455 592 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 CCNFP41002 786 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 TNNI2P48788 182 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 RACK1P63244 317 aaKnown RBP4.71□□□□□ -1.66
PATL1-202ENST00000531919 CLCQ05315 142 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 ZP2Q05996 745 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 RAD51AP2Q09MP3 1159 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 ZNF394Q53GI3 561 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 TMPRSS7Q7RTY8 843 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 ATG4DQ86TL0 474 aaPredicted RBP4.71□□□□□ -1.66
PATL1-202ENST00000531919 METTL16Q86W50 562 aaKnown RBP4.71□□□□□ -1.66
PATL1-202ENST00000531919 PHACTR4Q8IZ21 702 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 ZNF654Q8IZM8 581 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 BAHD1Q8TBE0 780 aaPredicted RBP4.71□□□□□ -1.66
PATL1-202ENST00000531919 ZNF428Q96B54 188 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 VWCEQ96DN2 955 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 KIF2CQ99661 725 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 ASPNQ9BXN1 380 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 GPR62Q9BZJ7 368 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.71□□□□□ -1.66
PATL1-202ENST00000531919 CNNM2Q9H8M5 875 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 ATP13A1Q9HD20 1204 aa4.71□□□□□ -1.66
PATL1-202ENST00000531919 KIAA1522Q9P206 1035 aaPredicted RBP4.71□□□□□ -1.66
PATL1-202ENST00000531919 MEIS3P2A8K0S8 358 aa4.7□□□□□ -1.66
PATL1-202ENST00000531919 H3BS24 57 aa4.7□□□□□ -1.66
PATL1-202ENST00000531919 BIN1O00499 593 aa4.7□□□□□ -1.66
PATL1-202ENST00000531919 RAG1P15918 1043 aa4.7□□□□□ -1.66
PATL1-202ENST00000531919 MCM4P33991 863 aa4.7□□□□□ -1.66
PATL1-202ENST00000531919 ARSHQ5FYA8 562 aa4.7□□□□□ -1.66
PATL1-202ENST00000531919 INTS3Q68E01 1043 aaKnown RBP4.7□□□□□ -1.66
PATL1-202ENST00000531919 GK5Q6ZS86 529 aa4.7□□□□□ -1.66
PATL1-202ENST00000531919 DTWD2Q8NBA8 298 aa4.7□□□□□ -1.66
PATL1-202ENST00000531919 UBE2FQ969M7 185 aa4.7□□□□□ -1.66
PATL1-202ENST00000531919 ATG4CQ96DT6 458 aa4.7□□□□□ -1.66
PATL1-202ENST00000531919 SPATA32Q96LK8 384 aa4.7□□□□□ -1.66
PATL1-202ENST00000531919 KREMEN1Q96MU8 473 aa4.7□□□□□ -1.66
PATL1-202ENST00000531919 FMNL2Q96PY5 1086 aa4.7□□□□□ -1.66
PATL1-202ENST00000531919 DUSP15Q9H1R2 295 aaPredicted RBP4.7□□□□□ -1.66
PATL1-202ENST00000531919 TRIT1Q9H3H1 467 aaKnown RBP4.7□□□□□ -1.66
PATL1-202ENST00000531919 ZSWIM5Q9P217 1185 aa4.7□□□□□ -1.66
PATL1-202ENST00000531919 ADAMTS6Q9UKP5 1117 aa4.7□□□□□ -1.66
PATL1-202ENST00000531919 PCDHGB7Q9Y5F8 929 aa4.7□□□□□ -1.66
PATL1-202ENST00000531919 UBOX5O94941 541 aa4.69□□□□□ -1.66
PATL1-202ENST00000531919 IMPDH2P12268 514 aa4.69□□□□□ -1.66
PATL1-202ENST00000531919 COL9A2Q14055 689 aaPredicted RBP4.69□□□□□ -1.66
PATL1-202ENST00000531919 OVOS1Q6IE37 1185 aa4.69□□□□□ -1.66
PATL1-202ENST00000531919 NLRC3Q7RTR2 1065 aa4.69□□□□□ -1.66
PATL1-202ENST00000531919 TMEM40Q8WWA1 233 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms