RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 HMGCS2P54868 508 aa12.92□□□□□ -0.34
GPATCH4-216ENST00000531900 PRMT2P55345 433 aa12.92□□□□□ -0.34
GPATCH4-216ENST00000531900 PABPC4Q13310 644 aaKnown RBP eCLIP12.92□□□□□ -0.34
GPATCH4-216ENST00000531900 TTC22Q5TAA0 569 aa12.92□□□□□ -0.34
GPATCH4-216ENST00000531900 CENPQQ7L2Z9 268 aaPredicted RBP12.92□□□□□ -0.34
GPATCH4-216ENST00000531900 SLC44A5Q8NCS7 719 aa12.92□□□□□ -0.34
GPATCH4-216ENST00000531900 ARMC5Q96C12 935 aa12.92□□□□□ -0.34
GPATCH4-216ENST00000531900 FAM227BQ96M60 508 aa12.92□□□□□ -0.34
GPATCH4-216ENST00000531900 TMEM106CQ9BVX2 250 aa12.92□□□□□ -0.34
GPATCH4-216ENST00000531900 KIAA1683Q9H0B3 1180 aa12.92□□□□□ -0.34
GPATCH4-216ENST00000531900 A0A0D9SFI3 127 aa12.91□□□□□ -0.34
GPATCH4-216ENST00000531900 FGRP09769 529 aa12.91□□□□□ -0.34
GPATCH4-216ENST00000531900 GSPT1P15170 499 aaKnown RBP12.91□□□□□ -0.34
GPATCH4-216ENST00000531900 USP14P54578 494 aa12.91□□□□□ -0.34
GPATCH4-216ENST00000531900 MTMR2Q13614 643 aa12.91□□□□□ -0.34
GPATCH4-216ENST00000531900 SLC9C1Q4G0N8 1177 aa12.91□□□□□ -0.34
GPATCH4-216ENST00000531900 TREML2Q5T2D2 321 aa12.91□□□□□ -0.34
GPATCH4-216ENST00000531900 USP17L2Q6R6M4 530 aa12.91□□□□□ -0.34
GPATCH4-216ENST00000531900 SIAH1Q8IUQ4 282 aa12.91□□□□□ -0.34
GPATCH4-216ENST00000531900 RILPL2Q969X0 211 aa12.91□□□□□ -0.34
GPATCH4-216ENST00000531900 ZNF287Q9HBT7 754 aa12.91□□□□□ -0.34
GPATCH4-216ENST00000531900 EMILIN3Q9NT22 766 aa12.91□□□□□ -0.34
GPATCH4-216ENST00000531900 CPA4Q9UI42 421 aa12.91□□□□□ -0.34
GPATCH4-216ENST00000531900 ANAPC4Q9UJX5 808 aa12.91□□□□□ -0.34
GPATCH4-216ENST00000531900 PNMA3Q9UL41 463 aa12.91□□□□□ -0.34
GPATCH4-216ENST00000531900 PDE4DIPQ5VU43 2346 aa12.9□□□□□ -0.34
GPATCH4-216ENST00000531900 BRCA2P51587 3418 aa12.9□□□□□ -0.34
GPATCH4-216ENST00000531900 APPP05067 770 aa12.9□□□□□ -0.34
GPATCH4-216ENST00000531900 AKR1B1P15121 316 aa12.9□□□□□ -0.34
GPATCH4-216ENST00000531900 TDO2P48775 406 aa12.9□□□□□ -0.34
GPATCH4-216ENST00000531900 MFAP1P55081 439 aaKnown RBP12.9□□□□□ -0.34
GPATCH4-216ENST00000531900 CAP1Q01518 475 aa12.9□□□□□ -0.34
GPATCH4-216ENST00000531900 NMIQ13287 307 aaPredicted RBP12.9□□□□□ -0.34
GPATCH4-216ENST00000531900 SEPT2Q15019 361 aa12.9□□□□□ -0.34
GPATCH4-216ENST00000531900 ERICH6BQ5W0A0 696 aa12.9□□□□□ -0.34
GPATCH4-216ENST00000531900 GADL1Q6ZQY3 521 aa12.9□□□□□ -0.34
GPATCH4-216ENST00000531900 NAPBQ9H115 298 aa12.9□□□□□ -0.34
GPATCH4-216ENST00000531900 KANSL2Q9H9L4 492 aa12.9□□□□□ -0.34
GPATCH4-216ENST00000531900 PTCH2Q9Y6C5 1203 aa12.9□□□□□ -0.34
GPATCH4-216ENST00000531900 DOCK3Q8IZD9 2030 aa12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 CCDC171Q6TFL3 1326 aa12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 A0A1W2PRG0 241 aa12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 MINDY4BA8MYZ0 360 aa12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 FMNL1O95466 1100 aaPredicted RBP12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 FGAP02671 866 aa12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 CYP2C8P10632 490 aa12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 HSPD1P10809 573 aaKnown RBP12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 RASA1P20936 1047 aa12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 PSMC4P43686 418 aa12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 GCLCP48506 637 aaPredicted RBP12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 PPARAQ07869 468 aa12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 RAB3GAP1Q15042 981 aa12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 VPS53Q5VIR6 699 aa12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 CCDC129Q6ZRS4 1044 aa12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 ZNF589Q86UQ0 364 aaPredicted RBP12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 ACER1Q8TDN7 264 aa12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 ZNF333Q96JL9 665 aa12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 TMOD4Q9NZQ9 345 aa12.89□□□□□ -0.35
GPATCH4-216ENST00000531900 IGKV6D-41A0A0C4DH26 115 aa12.88□□□□□ -0.35
GPATCH4-216ENST00000531900 POTEFA5A3E0 1075 aa12.88□□□□□ -0.35
GPATCH4-216ENST00000531900 SLC3A2P08195 630 aaKnown RBP12.88□□□□□ -0.35
GPATCH4-216ENST00000531900 OSBPP22059 807 aa12.88□□□□□ -0.35
GPATCH4-216ENST00000531900 PDE4BQ07343 736 aa12.88□□□□□ -0.35
GPATCH4-216ENST00000531900 FAM110CQ1W6H9 321 aa12.88□□□□□ -0.35
GPATCH4-216ENST00000531900 ARHGAP39Q9C0H5 1083 aa12.88□□□□□ -0.35
GPATCH4-216ENST00000531900 ASCC2Q9H1I8 757 aaPredicted RBP12.88□□□□□ -0.35
GPATCH4-216ENST00000531900 SYNPO2Q9UMS6 1093 aa12.88□□□□□ -0.35
GPATCH4-216ENST00000531900 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.88□□□□□ -0.35
GPATCH4-216ENST00000531900 TMX2Q9Y320 296 aa12.88□□□□□ -0.35
GPATCH4-216ENST00000531900 PLIN4Q96Q06 1357 aa12.88□□□□□ -0.35
GPATCH4-216ENST00000531900 MGAMO43451 1857 aa12.88□□□□□ -0.35
GPATCH4-216ENST00000531900 RLFQ13129 1914 aa12.88□□□□□ -0.35
GPATCH4-216ENST00000531900 MPHOSPH10O00566 681 aaKnown RBP12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 TNRC18O15417 2968 aaPredicted RBP12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 PCP11498 1178 aaKnown RBP12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 NT5C2P49902 561 aa12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 PRPF38BQ5VTL8 546 aaKnown RBP12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 LBX2Q6XYB7 198 aa12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 RAET1EQ8TD07 263 aa12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 SMCR8Q8TEV9 937 aaPredicted RBP12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 GTF3C2Q8WUA4 911 aaPredicted RBP12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 LPAR1Q92633 364 aa12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 MKL1Q969V6 931 aa12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 SH2D4AQ9H788 454 aa12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 MKNK2Q9HBH9 465 aa12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 DIAPH3Q9NSV4 1193 aa12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 NYAP2Q9P242 653 aa12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 MORF4L1Q9UBU8 362 aa12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 SRRDQ9UH36 339 aa12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 RAD50Q92878 1312 aa12.87□□□□□ -0.35
GPATCH4-216ENST00000531900 KIAA0100Q14667 2235 aaKnown RBP12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 USP17L15C9J2P7 530 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 USP17L13C9JLJ4 530 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 USP17L11C9JVI0 530 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 USP17L18D6R9N7 530 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 USP17L22D6RA61 530 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 USP17L17D6RBQ6 530 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 USP17L19D6RCP7 530 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms