RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 CABP5Q9NP86 173 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 COLQQ9Y215 455 aaPredicted RBP16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 RABGAP1Q9Y3P9 1069 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 ZNF532Q9HCE3 1301 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 GOLIM4O00461 696 aa16.13■□□□□ 0.17
AMBRA1-210ENST00000531542 POLR3DP05423 398 aaPredicted RBP16.13■□□□□ 0.17
AMBRA1-210ENST00000531542 CATSPERGQ6ZRH7 1159 aa16.13■□□□□ 0.17
AMBRA1-210ENST00000531542 HAUS7Q99871 368 aa16.13■□□□□ 0.17
AMBRA1-210ENST00000531542 HMX1Q9NP08 348 aaPredicted RBP16.13■□□□□ 0.17
AMBRA1-210ENST00000531542 DCP1AQ9NPI6 582 aaPredicted RBP16.13■□□□□ 0.17
AMBRA1-210ENST00000531542 PAG1Q9NWQ8 432 aa16.13■□□□□ 0.17
AMBRA1-210ENST00000531542 NR2E3Q9Y5X4 410 aa16.13■□□□□ 0.17
AMBRA1-210ENST00000531542 GUCY1A2P33402 732 aa16.12■□□□□ 0.17
AMBRA1-210ENST00000531542 ADD2P35612 726 aa16.12■□□□□ 0.17
AMBRA1-210ENST00000531542 FXR1P51114 621 aaKnown RBP eCLIP16.12■□□□□ 0.17
AMBRA1-210ENST00000531542 RAB3GAP1Q15042 981 aa16.12■□□□□ 0.17
AMBRA1-210ENST00000531542 Q3C1V9 767 aa16.12■□□□□ 0.17
AMBRA1-210ENST00000531542 MORN1Q5T089 497 aa16.12■□□□□ 0.17
AMBRA1-210ENST00000531542 DNAJC2Q99543 621 aaKnown RBP16.12■□□□□ 0.17
AMBRA1-210ENST00000531542 FEZ1Q99689 392 aa16.12■□□□□ 0.17
AMBRA1-210ENST00000531542 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.12■□□□□ 0.172e-6■■■■■ 28.2
AMBRA1-210ENST00000531542 ATP8A2Q9NTI2 1148 aa16.12■□□□□ 0.17
AMBRA1-210ENST00000531542 MCM9Q9NXL9 1143 aa16.12■□□□□ 0.17
AMBRA1-210ENST00000531542 SWAP70Q9UH65 585 aa16.12■□□□□ 0.17
AMBRA1-210ENST00000531542 VCAM1P19320 739 aa16.11■□□□□ 0.17
AMBRA1-210ENST00000531542 CCNA1P78396 465 aa16.11■□□□□ 0.17
AMBRA1-210ENST00000531542 UBE3CQ15386 1083 aa16.11■□□□□ 0.17
AMBRA1-210ENST00000531542 TRIB2Q92519 343 aa16.11■□□□□ 0.17
AMBRA1-210ENST00000531542 PRO3102Q9H379 93 aa16.11■□□□□ 0.17
AMBRA1-210ENST00000531542 DOCK3Q8IZD9 2030 aa16.11■□□□□ 0.17
AMBRA1-210ENST00000531542 APBB1O00213 710 aa16.1■□□□□ 0.17
AMBRA1-210ENST00000531542 GPR142Q7Z601 462 aa16.1■□□□□ 0.17
AMBRA1-210ENST00000531542 NECAB2Q7Z6G3 386 aa16.1■□□□□ 0.17
AMBRA1-210ENST00000531542 PLEKHH3Q7Z736 793 aa16.1■□□□□ 0.17
AMBRA1-210ENST00000531542 LCORLQ8N3X6 602 aa16.1■□□□□ 0.17
AMBRA1-210ENST00000531542 ACER1Q8TDN7 264 aa16.1■□□□□ 0.17
AMBRA1-210ENST00000531542 LRRCC1Q9C099 1032 aa16.1■□□□□ 0.17
AMBRA1-210ENST00000531542 PORCNQ9H237 461 aa16.1■□□□□ 0.17
AMBRA1-210ENST00000531542 OGDHLQ9ULD0 1010 aa16.1■□□□□ 0.17
AMBRA1-210ENST00000531542 DDX60LQ5H9U9 1706 aaKnown RBP16.1■□□□□ 0.17
AMBRA1-210ENST00000531542 MYH1P12882 1939 aa16.09■□□□□ 0.17
AMBRA1-210ENST00000531542 CNMDO75829 334 aa16.09■□□□□ 0.17
AMBRA1-210ENST00000531542 GLRX3O76003 335 aaKnown RBP16.09■□□□□ 0.17
AMBRA1-210ENST00000531542 CYP2B6P20813 491 aa16.09■□□□□ 0.17
AMBRA1-210ENST00000531542 RGS2P41220 211 aa16.09■□□□□ 0.17
AMBRA1-210ENST00000531542 TMEM179Q6ZVK1 233 aa16.09■□□□□ 0.17
AMBRA1-210ENST00000531542 CCAR1Q8IX12 1150 aaKnown RBP16.09■□□□□ 0.17
AMBRA1-210ENST00000531542 SDR42E1Q8WUS8 393 aa16.09■□□□□ 0.17
AMBRA1-210ENST00000531542 BOLA2Q9H3K6 86 aa16.09■□□□□ 0.17
AMBRA1-210ENST00000531542 PEX10O60683 326 aa16.08■□□□□ 0.16
AMBRA1-210ENST00000531542 HOXC6P09630 235 aa16.08■□□□□ 0.16
AMBRA1-210ENST00000531542 PRKAR2AP13861 404 aaKnown RBP16.08■□□□□ 0.16
AMBRA1-210ENST00000531542 TRIM32Q13049 653 aa16.08■□□□□ 0.16
AMBRA1-210ENST00000531542 SEPT2Q15019 361 aa16.08■□□□□ 0.16
AMBRA1-210ENST00000531542 ZSCAN25Q6NSZ9 544 aa16.08■□□□□ 0.16
AMBRA1-210ENST00000531542 EDC3Q96F86 508 aaKnown RBP16.08■□□□□ 0.16
AMBRA1-210ENST00000531542 PAWRQ96IZ0 340 aaKnown RBP16.08■□□□□ 0.16
AMBRA1-210ENST00000531542 CCDC17Q96LX7 622 aa16.08■□□□□ 0.16
AMBRA1-210ENST00000531542 APBA2Q99767 749 aa16.08■□□□□ 0.16
AMBRA1-210ENST00000531542 PAGR1Q9BTK6 254 aa16.08■□□□□ 0.16
AMBRA1-210ENST00000531542 ARMT1Q9H993 441 aa16.08■□□□□ 0.16
AMBRA1-210ENST00000531542 HOXC10Q9NYD6 342 aa16.08■□□□□ 0.16
AMBRA1-210ENST00000531542 RANBP2P49792 3224 aaKnown RBP16.07■□□□□ 0.16
AMBRA1-210ENST00000531542 A0A1W2PPC1 479 aa16.07■□□□□ 0.16
AMBRA1-210ENST00000531542 A0A1W2PRG0 241 aa16.07■□□□□ 0.16
AMBRA1-210ENST00000531542 SLC15A5A6NIM6 579 aa16.07■□□□□ 0.16
AMBRA1-210ENST00000531542 EVI5O60447 810 aa16.07■□□□□ 0.16
AMBRA1-210ENST00000531542 ZKSCAN1P17029 563 aaPredicted RBP16.07■□□□□ 0.16
AMBRA1-210ENST00000531542 MNX1P50219 401 aaPredicted RBP16.07■□□□□ 0.16
AMBRA1-210ENST00000531542 MAP2K5Q13163 448 aa16.07■□□□□ 0.16
AMBRA1-210ENST00000531542 COG2Q14746 738 aa16.07■□□□□ 0.16
AMBRA1-210ENST00000531542 ZYXQ15942 572 aaKnown RBP16.07■□□□□ 0.16
AMBRA1-210ENST00000531542 C12orf60Q5U649 245 aa16.07■□□□□ 0.16
AMBRA1-210ENST00000531542 CHRDL2Q6WN34 429 aa16.07■□□□□ 0.16
AMBRA1-210ENST00000531542 LPAR1Q92633 364 aa16.07■□□□□ 0.16
AMBRA1-210ENST00000531542 NBPF3Q9H094 633 aa16.07■□□□□ 0.16
AMBRA1-210ENST00000531542 RPAP3Q9H6T3 665 aaPredicted RBP16.07■□□□□ 0.16
AMBRA1-210ENST00000531542 TRIOBPQ9H2D6 2365 aa16.07■□□□□ 0.16
AMBRA1-210ENST00000531542 PLXNB2O15031 1838 aa16.06■□□□□ 0.16
AMBRA1-210ENST00000531542 SPDYE16A6NNV3 312 aaPredicted RBP16.06■□□□□ 0.16
AMBRA1-210ENST00000531542 MBD4O95243 580 aa16.06■□□□□ 0.16
AMBRA1-210ENST00000531542 PTPREP23469 700 aa16.06■□□□□ 0.16
AMBRA1-210ENST00000531542 CACNB2Q08289 660 aaPredicted RBP16.06■□□□□ 0.16
AMBRA1-210ENST00000531542 C20orf194Q5TEA3 1177 aa16.06■□□□□ 0.16
AMBRA1-210ENST00000531542 SIAH1Q8IUQ4 282 aa16.06■□□□□ 0.16
AMBRA1-210ENST00000531542 MB21D1Q8N884 522 aa16.06■□□□□ 0.16
AMBRA1-210ENST00000531542 DCTPP1Q9H773 170 aa16.06■□□□□ 0.16
AMBRA1-210ENST00000531542 BTBD7Q9P203 1132 aa16.06■□□□□ 0.16
AMBRA1-210ENST00000531542 RBM27Q9P2N5 1060 aaKnown RBP16.06■□□□□ 0.16
AMBRA1-210ENST00000531542 TMX2Q9Y320 296 aa16.06■□□□□ 0.16
AMBRA1-210ENST00000531542 PRKAB2O43741 272 aa16.05■□□□□ 0.16
AMBRA1-210ENST00000531542 STRNO43815 780 aa16.05■□□□□ 0.16
AMBRA1-210ENST00000531542 IGHA2P01877 340 aa16.05■□□□□ 0.16
AMBRA1-210ENST00000531542 EVX2Q03828 476 aa16.05■□□□□ 0.16
AMBRA1-210ENST00000531542 GRB14Q14449 540 aa16.05■□□□□ 0.16
AMBRA1-210ENST00000531542 AMOTL1Q8IY63 956 aa16.05■□□□□ 0.16
AMBRA1-210ENST00000531542 SHCBP1Q8NEM2 672 aa16.05■□□□□ 0.16
AMBRA1-210ENST00000531542 DDRGK1Q96HY6 314 aa16.05■□□□□ 0.16
AMBRA1-210ENST00000531542 SH2D4AQ9H788 454 aa16.05■□□□□ 0.16
AMBRA1-210ENST00000531542 ECHDC1Q9NTX5 307 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms