RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 ERVFC1P60507 584 aa7.16□□□□□ -1.26
USP47-211ENST00000531513 RALGPS1Q5JS13 557 aa7.16□□□□□ -1.26
USP47-211ENST00000531513 ABHD4Q8TB40 342 aa7.16□□□□□ -1.26
USP47-211ENST00000531513 EPB41L4BQ9H329 900 aa7.16□□□□□ -1.26
USP47-211ENST00000531513 PCDHB5Q9Y5E4 795 aa7.16□□□□□ -1.26
USP47-211ENST00000531513 GFRA2O00451 464 aa7.15□□□□□ -1.26
USP47-211ENST00000531513 LDHBP07195 334 aaKnown RBP7.15□□□□□ -1.26
USP47-211ENST00000531513 ERCC3P19447 782 aa7.15□□□□□ -1.26
USP47-211ENST00000531513 CCDC85BQ15834 202 aaPredicted RBP7.15□□□□□ -1.26
USP47-211ENST00000531513 SIAH1Q8IUQ4 282 aa7.15□□□□□ -1.26
USP47-211ENST00000531513 DCP1AQ9NPI6 582 aaPredicted RBP7.15□□□□□ -1.26
USP47-211ENST00000531513 TJP2Q9UDY2 1190 aa7.15□□□□□ -1.26
USP47-211ENST00000531513 TMEM59LQ9UK28 342 aa7.15□□□□□ -1.26
USP47-211ENST00000531513 WASH4PA8MWX3 477 aa7.14□□□□□ -1.27
USP47-211ENST00000531513 NPIPB6E9PJ23 425 aa7.14□□□□□ -1.27
USP47-211ENST00000531513 HK2P52789 917 aa7.14□□□□□ -1.27
USP47-211ENST00000531513 RPS26P62854 115 aaKnown RBP7.14□□□□□ -1.27
USP47-211ENST00000531513 TMPRSS7Q7RTY8 843 aa7.14□□□□□ -1.27
USP47-211ENST00000531513 MRPL41Q8IXM3 137 aaKnown RBP7.14□□□□□ -1.27
USP47-211ENST00000531513 PIWIL2Q8TC59 973 aaKnown RBP7.14□□□□□ -1.27
USP47-211ENST00000531513 CD320Q9NPF0 282 aa7.14□□□□□ -1.27
USP47-211ENST00000531513 TACC3Q9Y6A5 838 aa7.14□□□□□ -1.27
USP47-211ENST00000531513 UNCXA6NJT0 531 aa7.13□□□□□ -1.27
USP47-211ENST00000531513 PGRP06401 933 aa7.13□□□□□ -1.27
USP47-211ENST00000531513 LMNB1P20700 586 aa7.13□□□□□ -1.27
USP47-211ENST00000531513 DNAJC14Q6Y2X3 702 aaPredicted RBP7.13□□□□□ -1.27
USP47-211ENST00000531513 MYLIPQ8WY64 445 aa7.13□□□□□ -1.27
USP47-211ENST00000531513 TMEM87BQ96K49 555 aa7.13□□□□□ -1.27
USP47-211ENST00000531513 FRMD6Q96NE9 622 aa7.13□□□□□ -1.27
USP47-211ENST00000531513 IGSF3O75054 1194 aa7.12□□□□□ -1.27
USP47-211ENST00000531513 HPXP02790 462 aa7.12□□□□□ -1.27
USP47-211ENST00000531513 TMEM253P0C7T8 217 aa7.12□□□□□ -1.27
USP47-211ENST00000531513 EIF4BP23588 611 aaKnown RBP7.12□□□□□ -1.27
USP47-211ENST00000531513 GNA15P30679 374 aa7.12□□□□□ -1.27
USP47-211ENST00000531513 MAP3K11Q16584 847 aa7.12□□□□□ -1.27
USP47-211ENST00000531513 LILRA6Q6PI73 481 aa7.12□□□□□ -1.27
USP47-211ENST00000531513 CREG2Q8IUH2 290 aa7.12□□□□□ -1.27
USP47-211ENST00000531513 DNAJB8Q8NHS0 232 aa7.12□□□□□ -1.27
USP47-211ENST00000531513 Q96M66 194 aa7.12□□□□□ -1.27
USP47-211ENST00000531513 MED14OSP0DP75 135 aa7.11□□□□□ -1.27
USP47-211ENST00000531513 ETV3P41162 512 aa7.11□□□□□ -1.27
USP47-211ENST00000531513 LIG3P49916 1009 aa7.11□□□□□ -1.27
USP47-211ENST00000531513 KCNA10Q16322 511 aa7.11□□□□□ -1.27
USP47-211ENST00000531513 AGMOQ6ZNB7 445 aa7.11□□□□□ -1.27
USP47-211ENST00000531513 ATG14Q6ZNE5 492 aa7.11□□□□□ -1.27
USP47-211ENST00000531513 ADAMTS10Q9H324 1103 aa7.11□□□□□ -1.27
USP47-211ENST00000531513 LOC105371045A0A1W2PR82 267 aa7.1□□□□□ -1.27
USP47-211ENST00000531513 TPP2P29144 1249 aaPredicted RBP7.1□□□□□ -1.27
USP47-211ENST00000531513 TRHRP34981 398 aaPredicted RBP7.1□□□□□ -1.27
USP47-211ENST00000531513 GAB4Q2WGN9 574 aa7.1□□□□□ -1.27
USP47-211ENST00000531513 SLC6A19Q695T7 634 aa7.1□□□□□ -1.27
USP47-211ENST00000531513 KRTAP9-3Q9BYQ3 159 aa7.1□□□□□ -1.27
USP47-211ENST00000531513 RNF32Q9H0A6 362 aa7.1□□□□□ -1.27
USP47-211ENST00000531513 DUSP15Q9H1R2 295 aaPredicted RBP7.1□□□□□ -1.27
USP47-211ENST00000531513 TCAF2A6NFQ2 919 aa7.09□□□□□ -1.27
USP47-211ENST00000531513 ETV2O00321 342 aaPredicted RBP7.09□□□□□ -1.27
USP47-211ENST00000531513 TFE3P19532 575 aaPredicted RBP7.09□□□□□ -1.27
USP47-211ENST00000531513 GLDCP23378 1020 aa7.09□□□□□ -1.27
USP47-211ENST00000531513 TTLL10Q6ZVT0 673 aa7.09□□□□□ -1.27
USP47-211ENST00000531513 ACSF2Q96CM8 615 aaPredicted RBP7.09□□□□□ -1.27
USP47-211ENST00000531513 MIR1-1HGQ9H1L0 117 aa7.09□□□□□ -1.27
USP47-211ENST00000531513 SP110Q9HB58 689 aa7.09□□□□□ -1.27
USP47-211ENST00000531513 RNF19AQ9NV58 838 aa7.09□□□□□ -1.27
USP47-211ENST00000531513 PRPF40AO75400 957 aaKnown RBP7.08□□□□□ -1.28
USP47-211ENST00000531513 PDE4BQ07343 736 aa7.08□□□□□ -1.28
USP47-211ENST00000531513 CIAPIN1Q6FI81 312 aa7.08□□□□□ -1.28
USP47-211ENST00000531513 AMIGO3Q86WK7 504 aa7.08□□□□□ -1.28
USP47-211ENST00000531513 MCATQ8IVS2 390 aaKnown RBP7.08□□□□□ -1.28
USP47-211ENST00000531513 PPP1R13LQ8WUF5 828 aa7.08□□□□□ -1.28
USP47-211ENST00000531513 SLC26A8Q96RN1 970 aa7.08□□□□□ -1.28
USP47-211ENST00000531513 TRIT1Q9H3H1 467 aaKnown RBP7.08□□□□□ -1.28
USP47-211ENST00000531513 DUSP13Q9UII6 198 aa7.08□□□□□ -1.28
USP47-211ENST00000531513 ADAM30Q9UKF2 790 aa7.08□□□□□ -1.28
USP47-211ENST00000531513 ANKRD33BA6NCL7 494 aa7.07□□□□□ -1.28
USP47-211ENST00000531513 SRFP11831 508 aa7.07□□□□□ -1.28
USP47-211ENST00000531513 TSNAXIP1Q2TAA8 658 aa7.07□□□□□ -1.28
USP47-211ENST00000531513 IGSF5Q9NSI5 407 aa7.07□□□□□ -1.28
USP47-211ENST00000531513 CEP131Q9UPN4 1083 aa7.07□□□□□ -1.28
USP47-211ENST00000531513 SMG5Q9UPR3 1016 aaKnown RBP7.07□□□□□ -1.28
USP47-211ENST00000531513 AK5Q9Y6K8 562 aa7.07□□□□□ -1.28
USP47-211ENST00000531513 ZGLP1P0C6A0 271 aa7.06□□□□□ -1.28
USP47-211ENST00000531513 ZNF16P17020 682 aaPredicted RBP7.06□□□□□ -1.28
USP47-211ENST00000531513 LINC00310P59036 64 aa7.06□□□□□ -1.28
USP47-211ENST00000531513 RPL6Q02878 288 aaKnown RBP7.06□□□□□ -1.28
USP47-211ENST00000531513 EGR3Q06889 387 aa7.06□□□□□ -1.28
USP47-211ENST00000531513 MEI1Q5TIA1 1274 aa7.06□□□□□ -1.28
USP47-211ENST00000531513 DTWD2Q8NBA8 298 aa7.06□□□□□ -1.28
USP47-211ENST00000531513 CYB5D2Q8WUJ1 264 aa7.06□□□□□ -1.28
USP47-211ENST00000531513 GPR62Q9BZJ7 368 aa7.06□□□□□ -1.28
USP47-211ENST00000531513 C19orf44Q9H6X5 657 aa7.06□□□□□ -1.28
USP47-211ENST00000531513 GPATCH2Q9NW75 528 aa7.06□□□□□ -1.28
USP47-211ENST00000531513 KIAA1522Q9P206 1035 aaPredicted RBP7.06□□□□□ -1.28
USP47-211ENST00000531513 RAPGEFL1Q9UHV5 662 aa7.06□□□□□ -1.28
USP47-211ENST00000531513 CORINQ9Y5Q5 1042 aa7.06□□□□□ -1.28
USP47-211ENST00000531513 SHROOM4Q9ULL8 1493 aa7.05□□□□□ -1.28
USP47-211ENST00000531513 NCANO14594 1321 aa7.05□□□□□ -1.28
USP47-211ENST00000531513 NUAK1O60285 661 aa7.05□□□□□ -1.28
USP47-211ENST00000531513 INHBBP09529 407 aa7.05□□□□□ -1.28
USP47-211ENST00000531513 TIGD5Q53EQ6 642 aa7.05□□□□□ -1.28
USP47-211ENST00000531513 TSPYL5Q86VY4 417 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms