RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 RSBN1LQ6PCB5 846 aaPredicted RBP12.68□□□□□ -0.38
SRPRA-205ENST00000531104 TRIM22Q8IYM9 498 aa12.68□□□□□ -0.38
SRPRA-205ENST00000531104 ZNF396Q96N95 335 aaPredicted RBP12.68□□□□□ -0.38
SRPRA-205ENST00000531104 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.68□□□□□ -0.38
SRPRA-205ENST00000531104 ZNF277Q9NRM2 450 aaPredicted RBP12.68□□□□□ -0.38
SRPRA-205ENST00000531104 GJB4Q9NTQ9 266 aa12.68□□□□□ -0.38
SRPRA-205ENST00000531104 RTEL1Q9NZ71 1219 aa12.68□□□□□ -0.38
SRPRA-205ENST00000531104 RBM27Q9P2N5 1060 aaKnown RBP12.68□□□□□ -0.38
SRPRA-205ENST00000531104 FAM198AQ9UFP1 575 aa12.68□□□□□ -0.38
SRPRA-205ENST00000531104 SWAP70Q9UH65 585 aa12.68□□□□□ -0.38
SRPRA-205ENST00000531104 PCDHAC2Q9Y5I4 1007 aa12.68□□□□□ -0.38
SRPRA-205ENST00000531104 GREB1LQ9C091 1923 aaPredicted RBP12.68□□□□□ -0.38
SRPRA-205ENST00000531104 CNTNAP5Q8WYK1 1306 aa12.67□□□□□ -0.38
SRPRA-205ENST00000531104 PLEKHA8P1O95397 391 aa12.67□□□□□ -0.38
SRPRA-205ENST00000531104 NFIAQ12857 509 aa12.67□□□□□ -0.38
SRPRA-205ENST00000531104 PICALMQ13492 652 aa12.67□□□□□ -0.38
SRPRA-205ENST00000531104 DALRD3Q5D0E6 543 aaKnown RBP12.67□□□□□ -0.38
SRPRA-205ENST00000531104 METTL16Q86W50 562 aaKnown RBP12.67□□□□□ -0.38
SRPRA-205ENST00000531104 GAS2L3Q86XJ1 694 aa12.67□□□□□ -0.38
SRPRA-205ENST00000531104 LARGE2Q8N3Y3 721 aa12.67□□□□□ -0.38
SRPRA-205ENST00000531104 SRBD1Q8N5C6 995 aaKnown RBP12.67□□□□□ -0.38
SRPRA-205ENST00000531104 PGBD1Q96JS3 809 aa12.67□□□□□ -0.38
SRPRA-205ENST00000531104 SPATA32Q96LK8 384 aa12.67□□□□□ -0.38
SRPRA-205ENST00000531104 USP28Q96RU2 1077 aa12.67□□□□□ -0.38
SRPRA-205ENST00000531104 TMEM47Q9BQJ4 181 aa12.67□□□□□ -0.38
SRPRA-205ENST00000531104 KAT14Q9H8E8 782 aa12.67□□□□□ -0.38
SRPRA-205ENST00000531104 ZNRF3Q9ULT6 936 aa12.67□□□□□ -0.38
SRPRA-205ENST00000531104 LTBP3Q9NS15 1303 aa12.66□□□□□ -0.38
SRPRA-205ENST00000531104 PSMD14O00487 310 aa12.66□□□□□ -0.38
SRPRA-205ENST00000531104 MMP1P03956 469 aa12.66□□□□□ -0.38
SRPRA-205ENST00000531104 SHMT1P34896 483 aa12.66□□□□□ -0.38
SRPRA-205ENST00000531104 NASPP49321 788 aaPredicted RBP12.66□□□□□ -0.38
SRPRA-205ENST00000531104 CFAP100Q494V2 611 aa12.66□□□□□ -0.38
SRPRA-205ENST00000531104 MYSM1Q5VVJ2 828 aa12.66□□□□□ -0.38
SRPRA-205ENST00000531104 SH3BP5LQ7L8J4 393 aa12.66□□□□□ -0.38
SRPRA-205ENST00000531104 ZFPM1Q8IX07 1006 aa12.66□□□□□ -0.38
SRPRA-205ENST00000531104 MTMR14Q8NCE2 650 aa12.66□□□□□ -0.38
SRPRA-205ENST00000531104 PNMA1Q8ND90 353 aa12.66□□□□□ -0.38
SRPRA-205ENST00000531104 CTCFLQ8NI51 663 aaPredicted RBP12.66□□□□□ -0.38
SRPRA-205ENST00000531104 SYAP1Q96A49 352 aaPredicted RBP12.66□□□□□ -0.38
SRPRA-205ENST00000531104 SHISA4Q96DD7 197 aa12.66□□□□□ -0.38
SRPRA-205ENST00000531104 DHX36Q9H2U1 1008 aaKnown RBP12.66□□□□□ -0.38
SRPRA-205ENST00000531104 SERPINB13Q9UIV8 391 aa12.66□□□□□ -0.38
SRPRA-205ENST00000531104 ATRNL1Q5VV63 1379 aa12.66□□□□□ -0.38
SRPRA-205ENST00000531104 PALM3A6NDB9 673 aaPredicted RBP12.65□□□□□ -0.38
SRPRA-205ENST00000531104 GOLGA6L3A6NEY3 463 aa12.65□□□□□ -0.38
SRPRA-205ENST00000531104 ENTPD3O75355 529 aa12.65□□□□□ -0.38
SRPRA-205ENST00000531104 YEATS4O95619 227 aa12.65□□□□□ -0.38
SRPRA-205ENST00000531104 HLA-DOAP06340 250 aa12.65□□□□□ -0.38
SRPRA-205ENST00000531104 KIF5BP33176 963 aa12.65□□□□□ -0.38
SRPRA-205ENST00000531104 GNAQP50148 359 aa12.65□□□□□ -0.38
SRPRA-205ENST00000531104 TRIM29Q14134 588 aa12.65□□□□□ -0.38
SRPRA-205ENST00000531104 CMTR1Q8N1G2 835 aaKnown RBP12.65□□□□□ -0.38
SRPRA-205ENST00000531104 AGBL3Q8NEM8 1001 aa12.65□□□□□ -0.38
SRPRA-205ENST00000531104 POLR3EQ9NVU0 708 aa12.65□□□□□ -0.38
SRPRA-205ENST00000531104 MAD2L2Q9UI95 211 aa12.65□□□□□ -0.38
SRPRA-205ENST00000531104 NFKBIEO00221 500 aa12.64□□□□□ -0.39
SRPRA-205ENST00000531104 TOP1P11387 765 aaKnown RBP12.64□□□□□ -0.39
SRPRA-205ENST00000531104 AKR1B1P15121 316 aa12.64□□□□□ -0.39
SRPRA-205ENST00000531104 SMARCA1P28370 1054 aa12.64□□□□□ -0.39
SRPRA-205ENST00000531104 SLC35G1Q2M3R5 365 aa12.64□□□□□ -0.39
SRPRA-205ENST00000531104 CCDC183Q5T5S1 534 aa12.64□□□□□ -0.39
SRPRA-205ENST00000531104 L1TD1Q5T7N2 865 aaKnown RBP12.64□□□□□ -0.39
SRPRA-205ENST00000531104 NIM1KQ8IY84 436 aa12.64□□□□□ -0.39
SRPRA-205ENST00000531104 LINC00301Q8NCQ3 95 aa12.64□□□□□ -0.39
SRPRA-205ENST00000531104 CEP95Q96GE4 821 aa12.64□□□□□ -0.39
SRPRA-205ENST00000531104 ZBED3Q96IU2 234 aaPredicted RBP12.64□□□□□ -0.39
SRPRA-205ENST00000531104 PRMT6Q96LA8 375 aaPredicted RBP12.64□□□□□ -0.39
SRPRA-205ENST00000531104 PHF20Q9BVI0 1012 aa12.64□□□□□ -0.39
SRPRA-205ENST00000531104 FTOQ9C0B1 505 aaKnown RBP eCLIP12.64□□□□□ -0.39
SRPRA-205ENST00000531104 FOXP1Q9H334 677 aaPredicted RBP12.64□□□□□ -0.39
SRPRA-205ENST00000531104 DNAJC18Q9H819 358 aa12.64□□□□□ -0.39
SRPRA-205ENST00000531104 MTMR4Q9NYA4 1195 aa12.64□□□□□ -0.39
SRPRA-205ENST00000531104 V9GY48 417 aaPredicted RBP12.64□□□□□ -0.39
SRPRA-205ENST00000531104 ARFGEF1Q9Y6D6 1849 aa12.63□□□□□ -0.39
SRPRA-205ENST00000531104 MYH6P13533 1939 aa12.63□□□□□ -0.39
SRPRA-205ENST00000531104 DDTLA6NHG4 134 aaPredicted RBP12.63□□□□□ -0.39
SRPRA-205ENST00000531104 SPDYE2BA6NHP3 402 aa12.63□□□□□ -0.39
SRPRA-205ENST00000531104 RAD17O75943 681 aa12.63□□□□□ -0.39
SRPRA-205ENST00000531104 SPDYE6P0CI01 402 aa12.63□□□□□ -0.39
SRPRA-205ENST00000531104 MMP14P50281 582 aa12.63□□□□□ -0.39
SRPRA-205ENST00000531104 NPY5RQ15761 445 aa12.63□□□□□ -0.39
SRPRA-205ENST00000531104 PFKFB3Q16875 520 aaPredicted RBP12.63□□□□□ -0.39
SRPRA-205ENST00000531104 TATDN1Q6P1N9 297 aa12.63□□□□□ -0.39
SRPRA-205ENST00000531104 LRSAM1Q6UWE0 723 aa12.63□□□□□ -0.39
SRPRA-205ENST00000531104 FOXP4Q8IVH2 680 aaPredicted RBP12.63□□□□□ -0.39
SRPRA-205ENST00000531104 CCDC82Q8N4S0 544 aa12.63□□□□□ -0.39
SRPRA-205ENST00000531104 CCDC17Q96LX7 622 aa12.63□□□□□ -0.39
SRPRA-205ENST00000531104 LZTS2Q9BRK4 669 aa12.63□□□□□ -0.39
SRPRA-205ENST00000531104 TAOK3Q9H2K8 898 aa12.63□□□□□ -0.39
SRPRA-205ENST00000531104 TDRD3Q9H7E2 651 aaKnown RBP12.63□□□□□ -0.39
SRPRA-205ENST00000531104 PI4KBQ9UBF8 816 aa12.63□□□□□ -0.39
SRPRA-205ENST00000531104 CLIC4Q9Y696 253 aa12.63□□□□□ -0.39
SRPRA-205ENST00000531104 LETM1O95202 739 aaPredicted RBP12.62□□□□□ -0.39
SRPRA-205ENST00000531104 MYCNP04198 464 aaPredicted RBP12.62□□□□□ -0.39
SRPRA-205ENST00000531104 SNHG28P0DPA3 235 aa12.62□□□□□ -0.39
SRPRA-205ENST00000531104 LIG1P18858 919 aa12.62□□□□□ -0.39
SRPRA-205ENST00000531104 RBM5P52756 815 aaKnown RBP eCLIP12.62□□□□□ -0.39
SRPRA-205ENST00000531104 CACNB3P54284 484 aa12.62□□□□□ -0.39
SRPRA-205ENST00000531104 AKAP17AQ02040 695 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms