RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 SKAP1Q86WV1 359 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 GPRC5AQ8NFJ5 357 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 PI4K2BQ8TCG2 481 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 OSBP2Q969R2 916 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 ARPP21Q9UBL0 812 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-221ENST00000531068 BIN2Q9UBW5 565 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-221ENST00000531068 CHGBP05060 677 aa13.15□□□□□ -0.3
CAPN1-221ENST00000531068 APPP05067 770 aa13.15□□□□□ -0.3
CAPN1-221ENST00000531068 CDK8P49336 464 aa13.15□□□□□ -0.3
CAPN1-221ENST00000531068 FLT3LGP49771 235 aa13.15□□□□□ -0.3
CAPN1-221ENST00000531068 HERVK_113P62684 666 aa13.15□□□□□ -0.3
CAPN1-221ENST00000531068 UBXN2AP68543 259 aa13.15□□□□□ -0.3
CAPN1-221ENST00000531068 PRKCZQ05513 592 aa13.15□□□□□ -0.3
CAPN1-221ENST00000531068 IRF5Q13568 498 aa13.15□□□□□ -0.3
CAPN1-221ENST00000531068 SBK1Q52WX2 424 aa13.15□□□□□ -0.3
CAPN1-221ENST00000531068 SLAIN1Q8ND83 568 aa13.15□□□□□ -0.3
CAPN1-221ENST00000531068 OTUD7AQ8TE49 926 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-221ENST00000531068 SH3TC2Q8TF17 1288 aa13.15□□□□□ -0.3
CAPN1-221ENST00000531068 DYNLL2Q96FJ2 89 aa13.15□□□□□ -0.3
CAPN1-221ENST00000531068 FSD1Q9BTV5 496 aa13.15□□□□□ -0.3
CAPN1-221ENST00000531068 NACAP1Q9BZK3 213 aa13.15□□□□□ -0.3
CAPN1-221ENST00000531068 ZNF287Q9HBT7 754 aa13.15□□□□□ -0.3
CAPN1-221ENST00000531068 MORF4L1Q9UBU8 362 aa13.15□□□□□ -0.3
CAPN1-221ENST00000531068 STAP2Q9UGK3 403 aa13.15□□□□□ -0.3
CAPN1-221ENST00000531068 AK9Q5TCS8 1911 aa13.14□□□□□ -0.31
CAPN1-221ENST00000531068 GSG1L2A8MUP6 293 aa13.14□□□□□ -0.31
CAPN1-221ENST00000531068 PATL2C9JE40 543 aaKnown RBP13.14□□□□□ -0.31
CAPN1-221ENST00000531068 PDE4AP27815 886 aa13.14□□□□□ -0.31
CAPN1-221ENST00000531068 GUCY1A2P33402 732 aa13.14□□□□□ -0.31
CAPN1-221ENST00000531068 ZYXQ15942 572 aaKnown RBP13.14□□□□□ -0.31
CAPN1-221ENST00000531068 CATSPERGQ6ZRH7 1159 aa13.14□□□□□ -0.31
CAPN1-221ENST00000531068 C16orf86Q6ZW13 317 aa13.14□□□□□ -0.31
CAPN1-221ENST00000531068 TICAM2Q86XR7 235 aa13.14□□□□□ -0.31
CAPN1-221ENST00000531068 CCAR1Q8IX12 1150 aaKnown RBP13.14□□□□□ -0.31
CAPN1-221ENST00000531068 NKX2-3Q8TAU0 364 aa13.14□□□□□ -0.31
CAPN1-221ENST00000531068 ACER1Q8TDN7 264 aa13.14□□□□□ -0.31
CAPN1-221ENST00000531068 PXYLP1Q8TE99 480 aa13.14□□□□□ -0.31
CAPN1-221ENST00000531068 EVI5LQ96CN4 794 aa13.14□□□□□ -0.31
CAPN1-221ENST00000531068 SH2D4AQ9H788 454 aa13.14□□□□□ -0.31
CAPN1-221ENST00000531068 KANSL2Q9H9L4 492 aa13.14□□□□□ -0.31
CAPN1-221ENST00000531068 ARHGEF10LQ9HCE6 1279 aa13.14□□□□□ -0.31
CAPN1-221ENST00000531068 POTEFA5A3E0 1075 aa13.13□□□□□ -0.31
CAPN1-221ENST00000531068 GPAA1O43292 621 aa13.13□□□□□ -0.31
CAPN1-221ENST00000531068 ADCY3O60266 1144 aa13.13□□□□□ -0.31
CAPN1-221ENST00000531068 MAPK4P31152 587 aa13.13□□□□□ -0.31
CAPN1-221ENST00000531068 SLC44A5Q8NCS7 719 aa13.13□□□□□ -0.31
CAPN1-221ENST00000531068 MKNK2Q9HBH9 465 aa13.13□□□□□ -0.31
CAPN1-221ENST00000531068 HOXC10Q9NYD6 342 aa13.13□□□□□ -0.31
CAPN1-221ENST00000531068 RBPJLQ9UBG7 517 aa13.13□□□□□ -0.31
CAPN1-221ENST00000531068 GABRQQ9UN88 632 aa13.13□□□□□ -0.31
CAPN1-221ENST00000531068 MAST2Q6P0Q8 1798 aa13.12□□□□□ -0.31
CAPN1-221ENST00000531068 CYP2D7A0A087X1C5 515 aa13.12□□□□□ -0.31
CAPN1-221ENST00000531068 MINDY4BA8MYZ0 360 aa13.12□□□□□ -0.31
CAPN1-221ENST00000531068 MYCP01106 439 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-221ENST00000531068 AKR1B1P15121 316 aa13.12□□□□□ -0.31
CAPN1-221ENST00000531068 CAPN2P17655 700 aa13.12□□□□□ -0.31
CAPN1-221ENST00000531068 VCAM1P19320 739 aa13.12□□□□□ -0.31
CAPN1-221ENST00000531068 EN2P19622 333 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-221ENST00000531068 TDO2P48775 406 aa13.12□□□□□ -0.31
CAPN1-221ENST00000531068 PDE1AP54750 535 aa13.12□□□□□ -0.31
CAPN1-221ENST00000531068 CCNA1P78396 465 aa13.12□□□□□ -0.31
CAPN1-221ENST00000531068 EVX2Q03828 476 aa13.12□□□□□ -0.31
CAPN1-221ENST00000531068 ZMYM1Q5SVZ6 1142 aa13.12□□□□□ -0.31
CAPN1-221ENST00000531068 LPAR1Q92633 364 aa13.12□□□□□ -0.31
CAPN1-221ENST00000531068 RABGAP1Q9Y3P9 1069 aa13.12□□□□□ -0.31
CAPN1-221ENST00000531068 LAMB1P07942 1786 aa13.12□□□□□ -0.31
CAPN1-221ENST00000531068 SALL3Q9BXA9 1300 aa13.12□□□□□ -0.31
CAPN1-221ENST00000531068 DOCK2Q92608 1830 aa13.11□□□□□ -0.31
CAPN1-221ENST00000531068 A0A1W2PRG0 241 aa13.11□□□□□ -0.31
CAPN1-221ENST00000531068 SLC3A2P08195 630 aaKnown RBP13.11□□□□□ -0.31
CAPN1-221ENST00000531068 ERVK-9P63128 1117 aa13.11□□□□□ -0.31
CAPN1-221ENST00000531068 ERVK-24P63145 666 aa13.11□□□□□ -0.31
CAPN1-221ENST00000531068 ICA1Q05084 483 aa13.11□□□□□ -0.31
CAPN1-221ENST00000531068 COG2Q14746 738 aa13.11□□□□□ -0.31
CAPN1-221ENST00000531068 LBX2Q6XYB7 198 aa13.11□□□□□ -0.31
CAPN1-221ENST00000531068 IFNL3Q8IZI9 196 aa13.11□□□□□ -0.31
CAPN1-221ENST00000531068 RPAP3Q9H6T3 665 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-221ENST00000531068 CWC22Q9HCG8 908 aaKnown RBP13.11□□□□□ -0.31
CAPN1-221ENST00000531068 TMX2Q9Y320 296 aa13.11□□□□□ -0.31
CAPN1-221ENST00000531068 M0R2C6 588 aa13.1□□□□□ -0.31
CAPN1-221ENST00000531068 GJB1P08034 283 aa13.1□□□□□ -0.31
CAPN1-221ENST00000531068 Q3C1V9 767 aa13.1□□□□□ -0.31
CAPN1-221ENST00000531068 CHD1LQ86WJ1 897 aa13.1□□□□□ -0.31
CAPN1-221ENST00000531068 SIAH1Q8IUQ4 282 aa13.1□□□□□ -0.31
CAPN1-221ENST00000531068 ZNF444Q8N0Y2 327 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-221ENST00000531068 SOCS4Q8WXH5 440 aa13.1□□□□□ -0.31
CAPN1-221ENST00000531068 NUDT12Q9BQG2 462 aa13.1□□□□□ -0.31
CAPN1-221ENST00000531068 PAGR1Q9BTK6 254 aa13.1□□□□□ -0.31
CAPN1-221ENST00000531068 LNPKQ9C0E8 428 aa13.1□□□□□ -0.31
CAPN1-221ENST00000531068 RNF208Q9H0X6 261 aa13.1□□□□□ -0.31
CAPN1-221ENST00000531068 TXNRD2Q9NNW7 524 aa13.1□□□□□ -0.31
CAPN1-221ENST00000531068 GJD2Q9UKL4 321 aa13.1□□□□□ -0.31
CAPN1-221ENST00000531068 XRCC5P13010 732 aaKnown RBP13.09□□□□□ -0.31
CAPN1-221ENST00000531068 CCL5P13501 91 aa13.09□□□□□ -0.31
CAPN1-221ENST00000531068 ATP2B2Q01814 1243 aa13.09□□□□□ -0.31
CAPN1-221ENST00000531068 PDE4BQ07343 736 aa13.09□□□□□ -0.31
CAPN1-221ENST00000531068 MTFR1Q15390 333 aa13.09□□□□□ -0.31
CAPN1-221ENST00000531068 TRMT44Q8IYL2 757 aaKnown RBP13.09□□□□□ -0.31
CAPN1-221ENST00000531068 MB21D1Q8N884 522 aa13.09□□□□□ -0.31
CAPN1-221ENST00000531068 TANGO6Q9C0B7 1094 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms