RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 A0A1W2PRG0 241 aa22.4■■□□□ 1.18
GMDS-208ENST00000530927 SDSP20132 328 aa22.4■■□□□ 1.18
GMDS-208ENST00000530927 OTOP1Q7RTM1 612 aa22.4■■□□□ 1.18
GMDS-208ENST00000530927 PEX10O60683 326 aa22.39■■□□□ 1.17
GMDS-208ENST00000530927 ERO1AQ96HE7 468 aa22.39■■□□□ 1.17
GMDS-208ENST00000530927 HELLSQ9NRZ9 838 aa22.39■■□□□ 1.17
GMDS-208ENST00000530927 PRDM1O75626 825 aa22.38■■□□□ 1.17
GMDS-208ENST00000530927 TTC22Q5TAA0 569 aa22.38■■□□□ 1.17
GMDS-208ENST00000530927 SIAH1Q8IUQ4 282 aa22.38■■□□□ 1.17
GMDS-208ENST00000530927 FEZ1Q99689 392 aa22.38■■□□□ 1.17
GMDS-208ENST00000530927 TMOD4Q9NZQ9 345 aa22.38■■□□□ 1.17
GMDS-208ENST00000530927 SLC45A1Q9Y2W3 748 aa22.38■■□□□ 1.17
GMDS-208ENST00000530927 ROBO3Q96MS0 1386 aa22.38■■□□□ 1.17
GMDS-208ENST00000530927 BCRP11274 1271 aa22.37■■□□□ 1.17
GMDS-208ENST00000530927 LACTBP83111 547 aaPredicted RBP22.37■■□□□ 1.17
GMDS-208ENST00000530927 MCMDC2Q4G0Z9 681 aa22.37■■□□□ 1.17
GMDS-208ENST00000530927 KIAA1755Q5JYT7 1200 aa22.37■■□□□ 1.17
GMDS-208ENST00000530927 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.37■■□□□ 1.17
GMDS-208ENST00000530927 NAPBQ9H115 298 aa22.37■■□□□ 1.17
GMDS-208ENST00000530927 ASCC2Q9H1I8 757 aaPredicted RBP22.37■■□□□ 1.17
GMDS-208ENST00000530927 INCENPQ9NQS7 918 aa22.37■■□□□ 1.17
GMDS-208ENST00000530927 TACC3Q9Y6A5 838 aa22.37■■□□□ 1.17
GMDS-208ENST00000530927 C19orf81C9J6K1 198 aa22.36■■□□□ 1.17
GMDS-208ENST00000530927 RASA1P20936 1047 aa22.36■■□□□ 1.17
GMDS-208ENST00000530927 USP17L2Q6R6M4 530 aa22.36■■□□□ 1.17
GMDS-208ENST00000530927 CWC27Q6UX04 472 aaKnown RBP22.36■■□□□ 1.17
GMDS-208ENST00000530927 TMEM179Q6ZVK1 233 aa22.36■■□□□ 1.17
GMDS-208ENST00000530927 SMCR8Q8TEV9 937 aaPredicted RBP22.36■■□□□ 1.17
GMDS-208ENST00000530927 CTDSPL2Q05D32 466 aa22.35■■□□□ 1.17
GMDS-208ENST00000530927 ANKRD13CQ8N6S4 541 aa22.35■■□□□ 1.17
GMDS-208ENST00000530927 NACAP1Q9BZK3 213 aa22.35■■□□□ 1.17
GMDS-208ENST00000530927 IL25Q9H293 177 aa22.35■■□□□ 1.17
GMDS-208ENST00000530927 EFCC1Q9HA90 598 aa22.35■■□□□ 1.17
GMDS-208ENST00000530927 GREB1LQ9C091 1923 aaPredicted RBP22.34■■□□□ 1.17
GMDS-208ENST00000530927 CCDC85CA6NKD9 419 aa22.34■■□□□ 1.17
GMDS-208ENST00000530927 PPARAQ07869 468 aa22.34■■□□□ 1.17
GMDS-208ENST00000530927 P2RX7Q99572 595 aaKnown RBP22.34■■□□□ 1.17
GMDS-208ENST00000530927 KIAA1683Q9H0B3 1180 aa22.34■■□□□ 1.17
GMDS-208ENST00000530927 MKNK2Q9HBH9 465 aa22.34■■□□□ 1.17
GMDS-208ENST00000530927 HPS5Q9UPZ3 1129 aa22.34■■□□□ 1.17
GMDS-208ENST00000530927 CCDC171Q6TFL3 1326 aa22.33■■□□□ 1.17
GMDS-208ENST00000530927 HSPD1P10809 573 aaKnown RBP22.33■■□□□ 1.17
GMDS-208ENST00000530927 ICA1Q05084 483 aa22.33■■□□□ 1.17
GMDS-208ENST00000530927 POTEEQ6S8J3 1075 aa22.33■■□□□ 1.17
GMDS-208ENST00000530927 TRIM47Q96LD4 638 aa22.33■■□□□ 1.17
GMDS-208ENST00000530927 VCAM1P19320 739 aa22.32■■□□□ 1.16
GMDS-208ENST00000530927 ATP2B2Q01814 1243 aa22.32■■□□□ 1.16
GMDS-208ENST00000530927 FBXO46Q6PJ61 603 aaPredicted RBP22.32■■□□□ 1.16
GMDS-208ENST00000530927 C12orf42Q96LP6 360 aa22.32■■□□□ 1.16
GMDS-208ENST00000530927 CCDC17Q96LX7 622 aa22.32■■□□□ 1.16
GMDS-208ENST00000530927 DIAPH3Q9NSV4 1193 aa22.32■■□□□ 1.16
GMDS-208ENST00000530927 PNMA3Q9UL41 463 aa22.32■■□□□ 1.16
GMDS-208ENST00000530927 FGAP02671 866 aa22.31■■□□□ 1.16
GMDS-208ENST00000530927 EEF2P13639 858 aaKnown RBP22.31■■□□□ 1.16
GMDS-208ENST00000530927 OSBPP22059 807 aa22.31■■□□□ 1.16
GMDS-208ENST00000530927 HOXA7P31268 230 aaPredicted RBP22.31■■□□□ 1.16
GMDS-208ENST00000530927 PSMC4P43686 418 aa22.31■■□□□ 1.16
GMDS-208ENST00000530927 IRX3P78415 501 aaPredicted RBP22.31■■□□□ 1.16
GMDS-208ENST00000530927 PABPC4Q13310 644 aaKnown RBP eCLIP22.31■■□□□ 1.16
GMDS-208ENST00000530927 FAM47AQ5JRC9 791 aa22.31■■□□□ 1.16
GMDS-208ENST00000530927 SPICE1Q8N0Z3 855 aa22.31■■□□□ 1.16
GMDS-208ENST00000530927 RPAP3Q9H6T3 665 aaPredicted RBP22.31■■□□□ 1.16
GMDS-208ENST00000530927 TXNRD2Q9NNW7 524 aa22.31■■□□□ 1.16
GMDS-208ENST00000530927 TAOK2Q9UL54 1235 aa22.31■■□□□ 1.16
GMDS-208ENST00000530927 PTPN22Q9Y2R2 807 aa22.31■■□□□ 1.16
GMDS-208ENST00000530927 PTCH2Q9Y6C5 1203 aa22.31■■□□□ 1.16
GMDS-208ENST00000530927 MGAMO43451 1857 aa22.3■■□□□ 1.16
GMDS-208ENST00000530927 BRCA2P51587 3418 aa22.3■■□□□ 1.16
GMDS-208ENST00000530927 USP14P54578 494 aa22.3■■□□□ 1.16
GMDS-208ENST00000530927 HAND2P61296 217 aa22.3■■□□□ 1.16
GMDS-208ENST00000530927 HERVK_113P62684 666 aa22.3■■□□□ 1.16
GMDS-208ENST00000530927 PKN2Q16513 984 aaKnown RBP22.3■■□□□ 1.16
GMDS-208ENST00000530927 ERICH6BQ5W0A0 696 aa22.3■■□□□ 1.16
GMDS-208ENST00000530927 FMNL1O95466 1100 aaPredicted RBP22.29■■□□□ 1.16
GMDS-208ENST00000530927 KIF22Q14807 665 aa22.29■■□□□ 1.16
GMDS-208ENST00000530927 CENPQQ7L2Z9 268 aaPredicted RBP22.29■■□□□ 1.16
GMDS-208ENST00000530927 TICAM2Q86XR7 235 aa22.29■■□□□ 1.16
GMDS-208ENST00000530927 NKX2-3Q8TAU0 364 aa22.29■■□□□ 1.16
GMDS-208ENST00000530927 ALX1Q15699 326 aa22.28■■□□□ 1.16
GMDS-208ENST00000530927 NBPF3Q9H094 633 aa22.28■■□□□ 1.16
GMDS-208ENST00000530927 ARHGEF10LQ9HCE6 1279 aa22.28■■□□□ 1.16
GMDS-208ENST00000530927 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.28■■□□□ 1.16
GMDS-208ENST00000530927 TMX2Q9Y320 296 aa22.28■■□□□ 1.16
GMDS-208ENST00000530927 IGKV6D-41A0A0C4DH26 115 aa22.27■■□□□ 1.16
GMDS-208ENST00000530927 USP17L15C9J2P7 530 aa22.27■■□□□ 1.16
GMDS-208ENST00000530927 USP17L13C9JLJ4 530 aa22.27■■□□□ 1.16
GMDS-208ENST00000530927 USP17L11C9JVI0 530 aa22.27■■□□□ 1.16
GMDS-208ENST00000530927 USP17L18D6R9N7 530 aa22.27■■□□□ 1.16
GMDS-208ENST00000530927 USP17L22D6RA61 530 aa22.27■■□□□ 1.16
GMDS-208ENST00000530927 USP17L17D6RBQ6 530 aa22.27■■□□□ 1.16
GMDS-208ENST00000530927 USP17L19D6RCP7 530 aa22.27■■□□□ 1.16
GMDS-208ENST00000530927 USP17L20D6RJB6 530 aa22.27■■□□□ 1.16
GMDS-208ENST00000530927 USP17L24Q0WX57 530 aa22.27■■□□□ 1.16
GMDS-208ENST00000530927 FAM110CQ1W6H9 321 aa22.27■■□□□ 1.16
GMDS-208ENST00000530927 CATSPERGQ6ZRH7 1159 aa22.27■■□□□ 1.16
GMDS-208ENST00000530927 ZNF444Q8N0Y2 327 aaPredicted RBP22.27■■□□□ 1.16
GMDS-208ENST00000530927 KANSL2Q9H9L4 492 aa22.27■■□□□ 1.16
GMDS-208ENST00000530927 RBPJLQ9UBG7 517 aa22.27■■□□□ 1.16
GMDS-208ENST00000530927 GABRQQ9UN88 632 aa22.27■■□□□ 1.16
GMDS-208ENST00000530927 RAD21O60216 631 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms