RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 NKX1-1Q15270 411 aaPredicted RBP14.32□□□□□ -0.12
BDNF-215ENST00000530861 CDCA7Q9BWT1 371 aaPredicted RBP14.32□□□□□ -0.12
BDNF-215ENST00000530861 TCP11L1Q9NUJ3 509 aa14.32□□□□□ -0.12
BDNF-215ENST00000530861 KNDC1Q76NI1 1749 aa14.32□□□□□ -0.12
BDNF-215ENST00000530861 MTIF2P46199 727 aaKnown RBP14.32□□□□□ -0.12
BDNF-215ENST00000530861 FAM193AP78312 1265 aa14.32□□□□□ -0.12
BDNF-215ENST00000530861 POSTNQ15063 836 aa14.32□□□□□ -0.12
BDNF-215ENST00000530861 AMIGO3Q86WK7 504 aa14.32□□□□□ -0.12
BDNF-215ENST00000530861 IGDCC4Q8TDY8 1250 aa14.32□□□□□ -0.12
BDNF-215ENST00000530861 PUF60Q9UHX1 559 aaKnown RBP14.32□□□□□ -0.12
BDNF-215ENST00000530861 ELP1O95163 1332 aa14.32□□□□□ -0.12
BDNF-215ENST00000530861 MMP10P09238 476 aa14.32□□□□□ -0.12
BDNF-215ENST00000530861 MYL5Q02045 173 aa14.32□□□□□ -0.12
BDNF-215ENST00000530861 SLC39A14Q15043 492 aa14.32□□□□□ -0.12
BDNF-215ENST00000530861 TCERG1LQ5VWI1 586 aa14.32□□□□□ -0.12
BDNF-215ENST00000530861 CTR9Q6PD62 1173 aa14.32□□□□□ -0.12
BDNF-215ENST00000530861 KIF18AQ8NI77 898 aa14.32□□□□□ -0.12
BDNF-215ENST00000530861 CCDC43Q96MW1 224 aaKnown RBP14.32□□□□□ -0.12
BDNF-215ENST00000530861 DCP1AQ9NPI6 582 aaPredicted RBP14.32□□□□□ -0.12
BDNF-215ENST00000530861 HOMER2Q9NSB8 354 aa14.32□□□□□ -0.12
BDNF-215ENST00000530861 EPB41L2O43491 1005 aaKnown RBP14.31□□□□□ -0.12
BDNF-215ENST00000530861 RAD17O75943 681 aa14.31□□□□□ -0.12
BDNF-215ENST00000530861 RILPL1Q5EBL4 403 aa14.31□□□□□ -0.12
BDNF-215ENST00000530861 DEF6Q9H4E7 631 aa14.31□□□□□ -0.12
BDNF-215ENST00000530861 BSDC1Q9NW68 430 aaPredicted RBP14.31□□□□□ -0.12
BDNF-215ENST00000530861 RTEL1Q9NZ71 1219 aa14.31□□□□□ -0.12
BDNF-215ENST00000530861 ZHX1Q9UKY1 873 aaPredicted RBP14.31□□□□□ -0.12
BDNF-215ENST00000530861 PARP3Q9Y6F1 533 aa14.31□□□□□ -0.12
BDNF-215ENST00000530861 TCP10L2B9ZVM9 353 aa14.31□□□□□ -0.12
BDNF-215ENST00000530861 IBSPP21815 317 aaPredicted RBP14.31□□□□□ -0.12
BDNF-215ENST00000530861 U2AF2P26368 475 aaKnown RBP eCLIP14.31□□□□□ -0.12
BDNF-215ENST00000530861 DTHD1Q6ZMT9 781 aa14.31□□□□□ -0.12
BDNF-215ENST00000530861 CPXCR1Q8N123 301 aa14.31□□□□□ -0.12
BDNF-215ENST00000530861 FEZ1Q99689 392 aa14.31□□□□□ -0.12
BDNF-215ENST00000530861 OVOS2A0A0G2JMS6 1433 aa14.31□□□□□ -0.12
BDNF-215ENST00000530861 SF3B2Q13435 895 aaKnown RBP14.31□□□□□ -0.12
BDNF-215ENST00000530861 KIF4BQ2VIQ3 1234 aa14.31□□□□□ -0.12
BDNF-215ENST00000530861 SHC4Q6S5L8 630 aa14.31□□□□□ -0.12
BDNF-215ENST00000530861 CLEC17AQ6ZS10 378 aa14.31□□□□□ -0.12
BDNF-215ENST00000530861 PARP1P09874 1014 aaKnown RBP14.3□□□□□ -0.12
BDNF-215ENST00000530861 CHRNA5P30532 468 aa14.3□□□□□ -0.12
BDNF-215ENST00000530861 CAGE1Q8TC20 777 aa14.3□□□□□ -0.12
BDNF-215ENST00000530861 HPS3Q969F9 1004 aa14.3□□□□□ -0.12
BDNF-215ENST00000530861 RPS6KA4O75676 772 aa14.3□□□□□ -0.12
BDNF-215ENST00000530861 MIGA2Q7L4E1 593 aa14.3□□□□□ -0.12
BDNF-215ENST00000530861 SMARCC2Q8TAQ2 1214 aa14.3□□□□□ -0.12
BDNF-215ENST00000530861 DPF2Q92785 391 aa14.3□□□□□ -0.12
BDNF-215ENST00000530861 SEPT11Q9NVA2 429 aaKnown RBP14.3□□□□□ -0.12
BDNF-215ENST00000530861 SMCO2A6NFE2 343 aa14.3□□□□□ -0.12
BDNF-215ENST00000530861 DDX39AO00148 427 aaKnown RBP14.3□□□□□ -0.12
BDNF-215ENST00000530861 PDIA4P13667 645 aaKnown RBP14.3□□□□□ -0.12
BDNF-215ENST00000530861 TAL1P17542 331 aaPredicted RBP14.3□□□□□ -0.12
BDNF-215ENST00000530861 MAPK8IP2Q13387 824 aaPredicted RBP14.3□□□□□ -0.12
BDNF-215ENST00000530861 CCDC84Q86UT8 332 aaPredicted RBP14.3□□□□□ -0.12
BDNF-215ENST00000530861 CCDC12Q8WUD4 166 aaPredicted RBP14.3□□□□□ -0.12
BDNF-215ENST00000530861 GPSM2P81274 684 aa14.29□□□□□ -0.12
BDNF-215ENST00000530861 NELFCDQ8IXH7 590 aa14.29□□□□□ -0.12
BDNF-215ENST00000530861 NARFQ9UHQ1 456 aa14.29□□□□□ -0.12
BDNF-215ENST00000530861 MYO1BO43795 1136 aa14.29□□□□□ -0.12
BDNF-215ENST00000530861 NBPF11Q86T75 865 aa14.29□□□□□ -0.12
BDNF-215ENST00000530861 UBXN4Q92575 508 aa14.29□□□□□ -0.12
BDNF-215ENST00000530861 KANSL2Q9H9L4 492 aa14.29□□□□□ -0.12
BDNF-215ENST00000530861 COL5A2P05997 1499 aaPredicted RBP14.29□□□□□ -0.12
BDNF-215ENST00000530861 KIF13AQ9H1H9 1805 aa14.29□□□□□ -0.12
BDNF-215ENST00000530861 YEATS4O95619 227 aa14.29□□□□□ -0.12
BDNF-215ENST00000530861 RNASE9P60153 205 aaKnown RBP14.29□□□□□ -0.12
BDNF-215ENST00000530861 UBE2SQ16763 222 aa14.29□□□□□ -0.12
BDNF-215ENST00000530861 WDR78Q5VTH9 848 aa14.29□□□□□ -0.12
BDNF-215ENST00000530861 KRBA2Q6ZNG9 492 aa14.29□□□□□ -0.12
BDNF-215ENST00000530861 WDR66Q8TBY9 1149 aa14.29□□□□□ -0.12
BDNF-215ENST00000530861 PIGSQ96S52 555 aa14.29□□□□□ -0.12
BDNF-215ENST00000530861 EPC1Q9H2F5 836 aa14.29□□□□□ -0.12
BDNF-215ENST00000530861 REREQ9P2R6 1566 aa14.28□□□□□ -0.12
BDNF-215ENST00000530861 CMA1P23946 247 aa14.28□□□□□ -0.12
BDNF-215ENST00000530861 RBM17Q96I25 401 aaKnown RBP14.28□□□□□ -0.12
BDNF-215ENST00000530861 GDAP1L1Q96MZ0 367 aa14.28□□□□□ -0.12
BDNF-215ENST00000530861 KCNF1Q9H3M0 494 aa14.28□□□□□ -0.12
BDNF-215ENST00000530861 MMP1P03956 469 aa14.28□□□□□ -0.12
BDNF-215ENST00000530861 SAMM50Q9Y512 469 aa14.28□□□□□ -0.12
BDNF-215ENST00000530861 CBFA2T2O43439 604 aa14.28□□□□□ -0.12
BDNF-215ENST00000530861 NLRP12P59046 1061 aa14.28□□□□□ -0.12
BDNF-215ENST00000530861 UBXN1Q04323 297 aa14.28□□□□□ -0.12
BDNF-215ENST00000530861 LRRC41Q15345 812 aa14.28□□□□□ -0.12
BDNF-215ENST00000530861 EARS2Q5JPH6 523 aaKnown RBP14.28□□□□□ -0.12
BDNF-215ENST00000530861 SRBD1Q8N5C6 995 aaKnown RBP14.28□□□□□ -0.12
BDNF-215ENST00000530861 CAPZA3Q96KX2 299 aa14.28□□□□□ -0.12
BDNF-215ENST00000530861 KCNQ5Q9NR82 932 aa14.28□□□□□ -0.12
BDNF-215ENST00000530861 GJA3Q9Y6H8 435 aa14.28□□□□□ -0.12
BDNF-215ENST00000530861 SCG2P13521 617 aa14.27□□□□□ -0.12
BDNF-215ENST00000530861 TRIM21P19474 475 aaKnown RBP14.27□□□□□ -0.12
BDNF-215ENST00000530861 ILDR1Q86SU0 546 aaPredicted RBP14.27□□□□□ -0.12
BDNF-215ENST00000530861 FMR1NBQ8N0W7 255 aaPredicted RBP14.27□□□□□ -0.12
BDNF-215ENST00000530861 NSUN4Q96CB9 384 aaKnown RBP14.27□□□□□ -0.12
BDNF-215ENST00000530861 NBPF3Q9H094 633 aa14.27□□□□□ -0.12
BDNF-215ENST00000530861 ZNF287Q9HBT7 754 aa14.27□□□□□ -0.12
BDNF-215ENST00000530861 TMEM260Q9NX78 707 aa14.27□□□□□ -0.12
BDNF-215ENST00000530861 GUCA1BQ9UMX6 200 aa14.27□□□□□ -0.12
BDNF-215ENST00000530861 HLA-DOAP06340 250 aa14.27□□□□□ -0.13
BDNF-215ENST00000530861 IFNAR1P17181 557 aa14.27□□□□□ -0.13
BDNF-215ENST00000530861 STIM1Q13586 685 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms