RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 UPF2Q9HAU5 1272 aaKnown RBP17.52■□□□□ 0.4
SRPRA-204ENST00000530680 ZHX2Q9Y6X8 837 aa17.52■□□□□ 0.4
SRPRA-204ENST00000530680 ORC4O43929 436 aa17.51■□□□□ 0.39
SRPRA-204ENST00000530680 CYP21A2P08686 494 aa17.51■□□□□ 0.39
SRPRA-204ENST00000530680 PTPRAP18433 802 aa17.51■□□□□ 0.39
SRPRA-204ENST00000530680 ICA1Q05084 483 aa17.51■□□□□ 0.39
SRPRA-204ENST00000530680 PPIL2Q13356 520 aa17.51■□□□□ 0.39
SRPRA-204ENST00000530680 FAM47AQ5JRC9 791 aa17.51■□□□□ 0.39
SRPRA-204ENST00000530680 PPP4R3BQ5MIZ7 849 aa17.51■□□□□ 0.39
SRPRA-204ENST00000530680 SH2D4AQ9H788 454 aa17.51■□□□□ 0.39
SRPRA-204ENST00000530680 ARHGEF10LQ9HCE6 1279 aa17.51■□□□□ 0.39
SRPRA-204ENST00000530680 PTPRFP10586 1907 aa17.51■□□□□ 0.39
SRPRA-204ENST00000530680 GREB1LQ9C091 1923 aaPredicted RBP17.51■□□□□ 0.39
SRPRA-204ENST00000530680 NEDD4P46934 1319 aa17.5■□□□□ 0.39
SRPRA-204ENST00000530680 TRIM75PA6NK02 468 aa17.5■□□□□ 0.39
SRPRA-204ENST00000530680 SLC27A2O14975 620 aa17.5■□□□□ 0.39
SRPRA-204ENST00000530680 NT5C2P49902 561 aa17.5■□□□□ 0.39
SRPRA-204ENST00000530680 TFAP4Q01664 338 aa17.5■□□□□ 0.39
SRPRA-204ENST00000530680 RRP1BQ14684 758 aaKnown RBP17.5■□□□□ 0.39
SRPRA-204ENST00000530680 SEPT2Q15019 361 aa17.5■□□□□ 0.39
SRPRA-204ENST00000530680 SPRYD7Q5W111 196 aa17.5■□□□□ 0.39
SRPRA-204ENST00000530680 CTU1Q7Z7A3 348 aaKnown RBP17.5■□□□□ 0.39
SRPRA-204ENST00000530680 NCOA7Q8NI08 942 aa17.5■□□□□ 0.39
SRPRA-204ENST00000530680 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.5■□□□□ 0.39
SRPRA-204ENST00000530680 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.5■□□□□ 0.39
SRPRA-204ENST00000530680 B4E1Z4 1266 aa17.49■□□□□ 0.39
SRPRA-204ENST00000530680 EPB41L2O43491 1005 aaKnown RBP17.49■□□□□ 0.39
SRPRA-204ENST00000530680 RAD21O60216 631 aa17.49■□□□□ 0.39
SRPRA-204ENST00000530680 SREBF2Q12772 1141 aa17.49■□□□□ 0.39
SRPRA-204ENST00000530680 SNAPC2Q13487 334 aa17.49■□□□□ 0.39
SRPRA-204ENST00000530680 KRT32Q14532 448 aa17.49■□□□□ 0.39
SRPRA-204ENST00000530680 SHROOM1Q2M3G4 852 aaPredicted RBP17.49■□□□□ 0.39
SRPRA-204ENST00000530680 CCDC84Q86UT8 332 aaPredicted RBP17.49■□□□□ 0.39
SRPRA-204ENST00000530680 IQCA1Q86XH1 822 aa17.49■□□□□ 0.39
SRPRA-204ENST00000530680 REM2Q8IYK8 340 aaPredicted RBP17.49■□□□□ 0.39
SRPRA-204ENST00000530680 ZNF280CQ8ND82 737 aa17.49■□□□□ 0.39
SRPRA-204ENST00000530680 CNKSR2Q8WXI2 1034 aa17.49■□□□□ 0.39
SRPRA-204ENST00000530680 UBAC1Q9BSL1 405 aa17.49■□□□□ 0.39
SRPRA-204ENST00000530680 NBPF3Q9H094 633 aa17.49■□□□□ 0.39
SRPRA-204ENST00000530680 KANSL2Q9H9L4 492 aa17.49■□□□□ 0.39
SRPRA-204ENST00000530680 INCENPQ9NQS7 918 aa17.49■□□□□ 0.39
SRPRA-204ENST00000530680 E7EWF7 191 aa17.48■□□□□ 0.39
SRPRA-204ENST00000530680 KDM4AO75164 1064 aa17.48■□□□□ 0.39
SRPRA-204ENST00000530680 GTF2A2P52657 109 aa17.48■□□□□ 0.39
SRPRA-204ENST00000530680 SART3Q15020 963 aaKnown RBP17.48■□□□□ 0.39
SRPRA-204ENST00000530680 C8orf34Q49A92 452 aa17.48■□□□□ 0.39
SRPRA-204ENST00000530680 TMOD4Q9NZQ9 345 aa17.48■□□□□ 0.39
SRPRA-204ENST00000530680 STX8Q9UNK0 236 aa17.48■□□□□ 0.39
SRPRA-204ENST00000530680 PLIN4Q96Q06 1357 aa17.48■□□□□ 0.39
SRPRA-204ENST00000530680 ERICH2A1L162 156 aa17.47■□□□□ 0.39
SRPRA-204ENST00000530680 MANSC4A6NHS7 340 aaPredicted RBP17.47■□□□□ 0.39
SRPRA-204ENST00000530680 IRF6O14896 467 aa17.47■□□□□ 0.39
SRPRA-204ENST00000530680 SPP2Q13103 211 aa17.47■□□□□ 0.39
SRPRA-204ENST00000530680 MTMR2Q13614 643 aa17.47■□□□□ 0.39
SRPRA-204ENST00000530680 NECTIN1Q15223 517 aa17.47■□□□□ 0.39
SRPRA-204ENST00000530680 ZYXQ15942 572 aaKnown RBP17.47■□□□□ 0.39
SRPRA-204ENST00000530680 GADL1Q6ZQY3 521 aa17.47■□□□□ 0.39
SRPRA-204ENST00000530680 NEDD1Q8NHV4 660 aa17.47■□□□□ 0.39
SRPRA-204ENST00000530680 LOC285556D6RIA3 1793 aa17.46■□□□□ 0.39
SRPRA-204ENST00000530680 CCL15-CCL14A0A0B4J2E2 113 aa17.46■□□□□ 0.39
SRPRA-204ENST00000530680 USP17L10C9JJH3 530 aa17.46■□□□□ 0.39
SRPRA-204ENST00000530680 CETPP11597 493 aa17.46■□□□□ 0.39
SRPRA-204ENST00000530680 HSPA4P34932 840 aa17.46■□□□□ 0.39
SRPRA-204ENST00000530680 USP14P54578 494 aa17.46■□□□□ 0.39
SRPRA-204ENST00000530680 CCL15Q16663 113 aa17.46■□□□□ 0.39
SRPRA-204ENST00000530680 CCDC178Q5BJE1 867 aa17.46■□□□□ 0.39
SRPRA-204ENST00000530680 PRPF38BQ5VTL8 546 aaKnown RBP17.46■□□□□ 0.39
SRPRA-204ENST00000530680 CLEC10AQ8IUN9 316 aa17.46■□□□□ 0.39
SRPRA-204ENST00000530680 ISY1Q9ULR0 285 aaKnown RBP17.46■□□□□ 0.39
SRPRA-204ENST00000530680 CXCL11O14625 94 aa17.45■□□□□ 0.38
SRPRA-204ENST00000530680 TTLL1O95922 423 aa17.45■□□□□ 0.38
SRPRA-204ENST00000530680 FGRP09769 529 aa17.45■□□□□ 0.38
SRPRA-204ENST00000530680 GJA5P36382 358 aa17.45■□□□□ 0.38
SRPRA-204ENST00000530680 JAG1P78504 1218 aa17.45■□□□□ 0.38
SRPRA-204ENST00000530680 CEP95Q96GE4 821 aa17.45■□□□□ 0.38
SRPRA-204ENST00000530680 WDR18Q9BV38 432 aa17.45■□□□□ 0.38
SRPRA-204ENST00000530680 USP26Q9BXU7 913 aa17.45■□□□□ 0.38
SRPRA-204ENST00000530680 GOPCQ9HD26 462 aa17.45■□□□□ 0.38
SRPRA-204ENST00000530680 AFG3L2Q9Y4W6 797 aa17.45■□□□□ 0.38
SRPRA-204ENST00000530680 EEF2P13639 858 aaKnown RBP17.44■□□□□ 0.38
SRPRA-204ENST00000530680 HMGCS2P54868 508 aa17.44■□□□□ 0.38
SRPRA-204ENST00000530680 FGD1P98174 961 aa17.44■□□□□ 0.38
SRPRA-204ENST00000530680 OTUD7BQ6GQQ9 843 aa17.44■□□□□ 0.38
SRPRA-204ENST00000530680 FASTKD5Q7L8L6 764 aaKnown RBP17.44■□□□□ 0.38
SRPRA-204ENST00000530680 JAKMIP1Q96N16 626 aaKnown RBP17.44■□□□□ 0.38
SRPRA-204ENST00000530680 ZKSCAN3Q9BRR0 538 aa17.44■□□□□ 0.38
SRPRA-204ENST00000530680 CLIP2Q9UDT6 1046 aa17.44■□□□□ 0.38
SRPRA-204ENST00000530680 HPS5Q9UPZ3 1129 aa17.44■□□□□ 0.38
SRPRA-204ENST00000530680 C19orf81C9J6K1 198 aa17.43■□□□□ 0.38
SRPRA-204ENST00000530680 HMGB1P09429 215 aaKnown RBP17.43■□□□□ 0.38
SRPRA-204ENST00000530680 PSMA5P28066 241 aa17.43■□□□□ 0.38
SRPRA-204ENST00000530680 GUCY1A2P33402 732 aa17.43■□□□□ 0.38
SRPRA-204ENST00000530680 MCM5P33992 734 aa17.43■□□□□ 0.38
SRPRA-204ENST00000530680 BACE1P56817 501 aa17.43■□□□□ 0.38
SRPRA-204ENST00000530680 USP17L2Q6R6M4 530 aa17.43■□□□□ 0.38
SRPRA-204ENST00000530680 STOX1Q6ZVD7 989 aa17.43■□□□□ 0.38
SRPRA-204ENST00000530680 NEK1Q96PY6 1258 aa17.43■□□□□ 0.38
SRPRA-204ENST00000530680 MTMR4Q9NYA4 1195 aa17.43■□□□□ 0.38
SRPRA-204ENST00000530680 KCNH4Q9UQ05 1017 aa17.43■□□□□ 0.38
SRPRA-204ENST00000530680 TACC3Q9Y6A5 838 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms