RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 TFAP4Q01664 338 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 SPP2Q13103 211 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 SNAPC2Q13487 334 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 MTMR2Q13614 643 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 MOGSQ13724 837 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 CCL15Q16663 113 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 RRP12Q5JTH9 1297 aaKnown RBP13□□□□□ -0.33
CAPN1-218ENST00000530442 CREB3L3Q68CJ9 461 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 MFSD6Q6ZSS7 791 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 PRRT2Q7Z6L0 340 aaPredicted RBP13□□□□□ -0.33
CAPN1-218ENST00000530442 ZNF444Q8N0Y2 327 aaPredicted RBP13□□□□□ -0.33
CAPN1-218ENST00000530442 NEDD1Q8NHV4 660 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 ACER1Q8TDN7 264 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 BRI3BPQ8WY22 251 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 TOMM22Q9NS69 142 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 A0A1W2PRG0 241 aa12.99□□□□□ -0.33
CAPN1-218ENST00000530442 TESPA1A2RU30 521 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-218ENST00000530442 TSPY2A6NKD2 308 aa12.99□□□□□ -0.33
CAPN1-218ENST00000530442 IGF2BP3O00425 579 aaKnown RBP eCLIP12.99□□□□□ -0.33
CAPN1-218ENST00000530442 RANBP6O60518 1105 aaKnown RBP12.99□□□□□ -0.33
CAPN1-218ENST00000530442 BACE1P56817 501 aa12.99□□□□□ -0.33
CAPN1-218ENST00000530442 SREBF2Q12772 1141 aa12.99□□□□□ -0.33
CAPN1-218ENST00000530442 SIAH1Q8IUQ4 282 aa12.99□□□□□ -0.33
CAPN1-218ENST00000530442 JMYQ8N9B5 988 aa12.99□□□□□ -0.33
CAPN1-218ENST00000530442 CEP95Q96GE4 821 aa12.99□□□□□ -0.33
CAPN1-218ENST00000530442 PTPN18Q99952 460 aa12.99□□□□□ -0.33
CAPN1-218ENST00000530442 B4E1Z4 1266 aa12.98□□□□□ -0.33
CAPN1-218ENST00000530442 USP17L10C9JJH3 530 aa12.98□□□□□ -0.33
CAPN1-218ENST00000530442 E7EWF7 191 aa12.98□□□□□ -0.33
CAPN1-218ENST00000530442 NMT2O60551 498 aa12.98□□□□□ -0.33
CAPN1-218ENST00000530442 KDM4AO75164 1064 aa12.98□□□□□ -0.33
CAPN1-218ENST00000530442 CETPP11597 493 aa12.98□□□□□ -0.33
CAPN1-218ENST00000530442 TM4SF4P48230 202 aa12.98□□□□□ -0.33
CAPN1-218ENST00000530442 HMGCS2P54868 508 aa12.98□□□□□ -0.33
CAPN1-218ENST00000530442 SH3D19Q5HYK7 790 aa12.98□□□□□ -0.33
CAPN1-218ENST00000530442 ESR2Q92731 530 aa12.98□□□□□ -0.33
CAPN1-218ENST00000530442 KANSL2Q9H9L4 492 aa12.98□□□□□ -0.33
CAPN1-218ENST00000530442 IL17RBQ9NRM6 502 aa12.98□□□□□ -0.33
CAPN1-218ENST00000530442 A0A0G2JMZ2 1700 aa12.98□□□□□ -0.33
CAPN1-218ENST00000530442 RLFQ13129 1914 aa12.98□□□□□ -0.33
CAPN1-218ENST00000530442 BTBD19C9JJ37 291 aa12.97□□□□□ -0.33
CAPN1-218ENST00000530442 EPB41L2O43491 1005 aaKnown RBP12.97□□□□□ -0.33
CAPN1-218ENST00000530442 EEF2P13639 858 aaKnown RBP12.97□□□□□ -0.33
CAPN1-218ENST00000530442 HSPA4P34932 840 aa12.97□□□□□ -0.33
CAPN1-218ENST00000530442 NT5C2P49902 561 aa12.97□□□□□ -0.33
CAPN1-218ENST00000530442 COL9A3Q14050 684 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-218ENST00000530442 ZYXQ15942 572 aaKnown RBP12.97□□□□□ -0.33
CAPN1-218ENST00000530442 GADL1Q6ZQY3 521 aa12.97□□□□□ -0.33
CAPN1-218ENST00000530442 IFNL1Q8IU54 200 aa12.97□□□□□ -0.33
CAPN1-218ENST00000530442 REM2Q8IYK8 340 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-218ENST00000530442 RASEFQ8IZ41 740 aa12.97□□□□□ -0.33
CAPN1-218ENST00000530442 FAM43AQ8N2R8 423 aa12.97□□□□□ -0.33
CAPN1-218ENST00000530442 C12orf42Q96LP6 360 aa12.97□□□□□ -0.33
CAPN1-218ENST00000530442 FEZ1Q99689 392 aa12.97□□□□□ -0.33
CAPN1-218ENST00000530442 KRT23Q9C075 422 aa12.97□□□□□ -0.33
CAPN1-218ENST00000530442 KIAA1683Q9H0B3 1180 aa12.97□□□□□ -0.33
CAPN1-218ENST00000530442 CNNM2Q9H8M5 875 aa12.97□□□□□ -0.33
CAPN1-218ENST00000530442 ARHGEF10LQ9HCE6 1279 aa12.97□□□□□ -0.33
CAPN1-218ENST00000530442 MTMR4Q9NYA4 1195 aa12.97□□□□□ -0.33
CAPN1-218ENST00000530442 SEC24BO95487 1268 aa12.96□□□□□ -0.33
CAPN1-218ENST00000530442 NOVP48745 357 aa12.96□□□□□ -0.33
CAPN1-218ENST00000530442 ATP2B2Q01814 1243 aa12.96□□□□□ -0.33
CAPN1-218ENST00000530442 KIAA1755Q5JYT7 1200 aa12.96□□□□□ -0.33
CAPN1-218ENST00000530442 TREML2Q5T2D2 321 aa12.96□□□□□ -0.33
CAPN1-218ENST00000530442 GPAT2Q6NUI2 795 aa12.96□□□□□ -0.33
CAPN1-218ENST00000530442 CYB5R4Q7L1T6 521 aa12.96□□□□□ -0.33
CAPN1-218ENST00000530442 MB21D2Q8IYB1 491 aaPredicted RBP12.96□□□□□ -0.33
CAPN1-218ENST00000530442 LRRC47Q8N1G4 583 aaKnown RBP12.96□□□□□ -0.33
CAPN1-218ENST00000530442 PROCA1Q8NCQ7 364 aaPredicted RBP12.96□□□□□ -0.33
CAPN1-218ENST00000530442 KCNB2Q92953 911 aa12.96□□□□□ -0.33
CAPN1-218ENST00000530442 USP26Q9BXU7 913 aa12.96□□□□□ -0.33
CAPN1-218ENST00000530442 EMILIN3Q9NT22 766 aa12.96□□□□□ -0.33
CAPN1-218ENST00000530442 NYAP2Q9P242 653 aa12.96□□□□□ -0.33
CAPN1-218ENST00000530442 TMX2Q9Y320 296 aa12.96□□□□□ -0.33
CAPN1-218ENST00000530442 C19orf81C9J6K1 198 aa12.95□□□□□ -0.34
CAPN1-218ENST00000530442 TTLL1O95922 423 aa12.95□□□□□ -0.34
CAPN1-218ENST00000530442 VCAM1P19320 739 aa12.95□□□□□ -0.34
CAPN1-218ENST00000530442 USP14P54578 494 aa12.95□□□□□ -0.34
CAPN1-218ENST00000530442 INHBEP58166 350 aa12.95□□□□□ -0.34
CAPN1-218ENST00000530442 MAP2K1Q02750 393 aaPredicted RBP12.95□□□□□ -0.34
CAPN1-218ENST00000530442 TRDNQ13061 729 aa12.95□□□□□ -0.34
CAPN1-218ENST00000530442 RNF20Q5VTR2 975 aa12.95□□□□□ -0.34
CAPN1-218ENST00000530442 USP17L2Q6R6M4 530 aa12.95□□□□□ -0.34
CAPN1-218ENST00000530442 FASTKD5Q7L8L6 764 aaKnown RBP12.95□□□□□ -0.34
CAPN1-218ENST00000530442 RALYLQ86SE5 291 aaKnown RBP12.95□□□□□ -0.34
CAPN1-218ENST00000530442 ANKRD23Q86SG2 305 aa12.95□□□□□ -0.34
CAPN1-218ENST00000530442 NCOA7Q8NI08 942 aa12.95□□□□□ -0.34
CAPN1-218ENST00000530442 ZKSCAN3Q9BRR0 538 aa12.95□□□□□ -0.34
CAPN1-218ENST00000530442 SH2D4AQ9H788 454 aa12.95□□□□□ -0.34
CAPN1-218ENST00000530442 TCP11L1Q9NUJ3 509 aa12.95□□□□□ -0.34
CAPN1-218ENST00000530442 WBP1LQ9NX94 342 aa12.95□□□□□ -0.34
CAPN1-218ENST00000530442 ZSWIM5Q9P217 1185 aa12.95□□□□□ -0.34
CAPN1-218ENST00000530442 STX8Q9UNK0 236 aa12.95□□□□□ -0.34
CAPN1-218ENST00000530442 AGTPBP1Q9UPW5 1226 aa12.95□□□□□ -0.34
CAPN1-218ENST00000530442 TNKSO95271 1327 aa12.94□□□□□ -0.34
CAPN1-218ENST00000530442 ANTXR2P58335 489 aa12.94□□□□□ -0.34
CAPN1-218ENST00000530442 ADCK5Q3MIX3 580 aa12.94□□□□□ -0.34
CAPN1-218ENST00000530442 TSGA10IPQ3SY00 556 aa12.94□□□□□ -0.34
CAPN1-218ENST00000530442 RCSD1Q6JBY9 416 aa12.94□□□□□ -0.34
CAPN1-218ENST00000530442 MKL1Q969V6 931 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms