RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 TTC22Q5TAA0 569 aa20.14■□□□□ 0.81
SF3B2-209ENST00000530322 USP17L2Q6R6M4 530 aa20.14■□□□□ 0.81
SF3B2-209ENST00000530322 OTOP1Q7RTM1 612 aa20.14■□□□□ 0.81
SF3B2-209ENST00000530322 KIAA1683Q9H0B3 1180 aa20.14■□□□□ 0.81
SF3B2-209ENST00000530322 NAPBQ9H115 298 aa20.14■□□□□ 0.81
SF3B2-209ENST00000530322 PNMA3Q9UL41 463 aa20.14■□□□□ 0.81
SF3B2-209ENST00000530322 TRIM17Q9Y577 477 aa20.14■□□□□ 0.81
SF3B2-209ENST00000530322 HTTP42858 3142 aa20.13■□□□□ 0.81
SF3B2-209ENST00000530322 GSPT1P15170 499 aaKnown RBP20.13■□□□□ 0.81
SF3B2-209ENST00000530322 HOXA7P31268 230 aaPredicted RBP20.13■□□□□ 0.81
SF3B2-209ENST00000530322 LACTBP83111 547 aaPredicted RBP20.13■□□□□ 0.81
SF3B2-209ENST00000530322 PABPC4Q13310 644 aaKnown RBP eCLIP20.13■□□□□ 0.81
SF3B2-209ENST00000530322 VPS53Q5VIR6 699 aa20.13■□□□□ 0.81
SF3B2-209ENST00000530322 ZNF589Q86UQ0 364 aaPredicted RBP20.13■□□□□ 0.81
SF3B2-209ENST00000530322 C12orf42Q96LP6 360 aa20.13■□□□□ 0.81
SF3B2-209ENST00000530322 FEZ1Q99689 392 aa20.13■□□□□ 0.81
SF3B2-209ENST00000530322 ASCC2Q9H1I8 757 aaPredicted RBP20.13■□□□□ 0.81
SF3B2-209ENST00000530322 A0A1W2PRG0 241 aa20.12■□□□□ 0.81
SF3B2-209ENST00000530322 RASA1P20936 1047 aa20.12■□□□□ 0.81
SF3B2-209ENST00000530322 USP14P54578 494 aa20.12■□□□□ 0.81
SF3B2-209ENST00000530322 ZYXQ15942 572 aaKnown RBP20.12■□□□□ 0.81
SF3B2-209ENST00000530322 SIAH1Q8IUQ4 282 aa20.12■□□□□ 0.81
SF3B2-209ENST00000530322 STK11IPQ8N1F8 1099 aa20.12■□□□□ 0.81
SF3B2-209ENST00000530322 SMCR8Q8TEV9 937 aaPredicted RBP20.12■□□□□ 0.81
SF3B2-209ENST00000530322 EFCC1Q9HA90 598 aa20.12■□□□□ 0.81
SF3B2-209ENST00000530322 MGAMO43451 1857 aa20.11■□□□□ 0.81
SF3B2-209ENST00000530322 OSBPP22059 807 aa20.11■□□□□ 0.81
SF3B2-209ENST00000530322 ALX1Q15699 326 aa20.11■□□□□ 0.81
SF3B2-209ENST00000530322 FBXO46Q6PJ61 603 aaPredicted RBP20.11■□□□□ 0.81
SF3B2-209ENST00000530322 CLEC10AQ8IUN9 316 aa20.11■□□□□ 0.81
SF3B2-209ENST00000530322 ARHGAP39Q9C0H5 1083 aa20.11■□□□□ 0.81
SF3B2-209ENST00000530322 CCDC171Q6TFL3 1326 aa20.1■□□□□ 0.81
SF3B2-209ENST00000530322 HIP1O00291 1037 aa20.1■□□□□ 0.81
SF3B2-209ENST00000530322 ICA1Q05084 483 aa20.1■□□□□ 0.81
SF3B2-209ENST00000530322 PPARAQ07869 468 aa20.1■□□□□ 0.81
SF3B2-209ENST00000530322 KIF22Q14807 665 aa20.1■□□□□ 0.81
SF3B2-209ENST00000530322 ARHGEF6Q15052 776 aa20.1■□□□□ 0.81
SF3B2-209ENST00000530322 CENPQQ7L2Z9 268 aaPredicted RBP20.1■□□□□ 0.81
SF3B2-209ENST00000530322 MKNK2Q9HBH9 465 aa20.1■□□□□ 0.81
SF3B2-209ENST00000530322 DIAPH3Q9NSV4 1193 aa20.1■□□□□ 0.81
SF3B2-209ENST00000530322 HSPD1P10809 573 aaKnown RBP20.09■□□□□ 0.81
SF3B2-209ENST00000530322 CTGFP29279 349 aa20.09■□□□□ 0.81
SF3B2-209ENST00000530322 IRX3P78415 501 aaPredicted RBP20.09■□□□□ 0.81
SF3B2-209ENST00000530322 CWC27Q6UX04 472 aaKnown RBP20.09■□□□□ 0.81
SF3B2-209ENST00000530322 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.09■□□□□ 0.81
SF3B2-209ENST00000530322 KANSL2Q9H9L4 492 aa20.09■□□□□ 0.81
SF3B2-209ENST00000530322 ZNF287Q9HBT7 754 aa20.09■□□□□ 0.81
SF3B2-209ENST00000530322 PTPN22Q9Y2R2 807 aa20.09■□□□□ 0.81
SF3B2-209ENST00000530322 CAPN15O75808 1086 aa20.08■□□□□ 0.81
SF3B2-209ENST00000530322 FGAP02671 866 aa20.08■□□□□ 0.81
SF3B2-209ENST00000530322 VCAM1P19320 739 aa20.08■□□□□ 0.81
SF3B2-209ENST00000530322 GCLCP48506 637 aaPredicted RBP20.08■□□□□ 0.81
SF3B2-209ENST00000530322 ANKRD13CQ8N6S4 541 aa20.08■□□□□ 0.81
SF3B2-209ENST00000530322 P2RX7Q99572 595 aaKnown RBP20.08■□□□□ 0.81
SF3B2-209ENST00000530322 ARHGEF10LQ9HCE6 1279 aa20.08■□□□□ 0.81
SF3B2-209ENST00000530322 ANAPC4Q9UJX5 808 aa20.08■□□□□ 0.81
SF3B2-209ENST00000530322 HPS5Q9UPZ3 1129 aa20.08■□□□□ 0.81
SF3B2-209ENST00000530322 TMX2Q9Y320 296 aa20.08■□□□□ 0.81
SF3B2-209ENST00000530322 ZMYM6O95789 1325 aa20.07■□□□□ 0.8
SF3B2-209ENST00000530322 PRDM1O75626 825 aa20.07■□□□□ 0.8
SF3B2-209ENST00000530322 GNRH1P01148 92 aa20.07■□□□□ 0.8
SF3B2-209ENST00000530322 SLC3A2P08195 630 aaKnown RBP20.07■□□□□ 0.8
SF3B2-209ENST00000530322 PSMC4P43686 418 aa20.07■□□□□ 0.8
SF3B2-209ENST00000530322 MFAP1P55081 439 aaKnown RBP20.07■□□□□ 0.8
SF3B2-209ENST00000530322 PDE4BQ07343 736 aa20.07■□□□□ 0.8
SF3B2-209ENST00000530322 FAM110CQ1W6H9 321 aa20.07■□□□□ 0.8
SF3B2-209ENST00000530322 ZNF444Q8N0Y2 327 aaPredicted RBP20.07■□□□□ 0.8
SF3B2-209ENST00000530322 TRIM47Q96LD4 638 aa20.07■□□□□ 0.8
SF3B2-209ENST00000530322 USP17L15C9J2P7 530 aa20.06■□□□□ 0.8
SF3B2-209ENST00000530322 USP17L13C9JLJ4 530 aa20.06■□□□□ 0.8
SF3B2-209ENST00000530322 USP17L11C9JVI0 530 aa20.06■□□□□ 0.8
SF3B2-209ENST00000530322 USP17L18D6R9N7 530 aa20.06■□□□□ 0.8
SF3B2-209ENST00000530322 USP17L22D6RA61 530 aa20.06■□□□□ 0.8
SF3B2-209ENST00000530322 USP17L17D6RBQ6 530 aa20.06■□□□□ 0.8
SF3B2-209ENST00000530322 USP17L19D6RCP7 530 aa20.06■□□□□ 0.8
SF3B2-209ENST00000530322 USP17L20D6RJB6 530 aa20.06■□□□□ 0.8
SF3B2-209ENST00000530322 ECM2O94769 699 aaPredicted RBP20.06■□□□□ 0.8
SF3B2-209ENST00000530322 EEF2P13639 858 aaKnown RBP20.06■□□□□ 0.8
SF3B2-209ENST00000530322 CENPFP49454 3210 aa20.06■□□□□ 0.8
SF3B2-209ENST00000530322 HERVK_113P62684 666 aa20.06■□□□□ 0.8
SF3B2-209ENST00000530322 CTDSPL2Q05D32 466 aa20.06■□□□□ 0.8
SF3B2-209ENST00000530322 USP17L24Q0WX57 530 aa20.06■□□□□ 0.8
SF3B2-209ENST00000530322 KIAA1755Q5JYT7 1200 aa20.06■□□□□ 0.8
SF3B2-209ENST00000530322 CATSPERGQ6ZRH7 1159 aa20.06■□□□□ 0.8
SF3B2-209ENST00000530322 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.06■□□□□ 0.8
SF3B2-209ENST00000530322 MYH4Q9Y623 1939 aa20.06■□□□□ 0.8
SF3B2-209ENST00000530322 IGKV6D-41A0A0C4DH26 115 aa20.05■□□□□ 0.8
SF3B2-209ENST00000530322 RPAP3Q9H6T3 665 aaPredicted RBP20.05■□□□□ 0.8
SF3B2-209ENST00000530322 SH2D4AQ9H788 454 aa20.05■□□□□ 0.8
SF3B2-209ENST00000530322 MORF4L1Q9UBU8 362 aa20.05■□□□□ 0.8
SF3B2-209ENST00000530322 TACC3Q9Y6A5 838 aa20.05■□□□□ 0.8
SF3B2-209ENST00000530322 RLFQ13129 1914 aa20.04■□□□□ 0.8
SF3B2-209ENST00000530322 DOCK3Q8IZD9 2030 aa20.04■□□□□ 0.8
SF3B2-209ENST00000530322 CCDC85CA6NKD9 419 aa20.04■□□□□ 0.8
SF3B2-209ENST00000530322 FMNL1O95466 1100 aaPredicted RBP20.04■□□□□ 0.8
SF3B2-209ENST00000530322 FCGRTP55899 365 aa20.04■□□□□ 0.8
SF3B2-209ENST00000530322 POTEEQ6S8J3 1075 aa20.04■□□□□ 0.8
SF3B2-209ENST00000530322 LPAR1Q92633 364 aa20.04■□□□□ 0.8
SF3B2-209ENST00000530322 VCPKMTQ9H867 229 aa20.04■□□□□ 0.8
SF3B2-209ENST00000530322 INCENPQ9NQS7 918 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms