RNA–Protein interactions for RNA: ENST00000530068.5

CTNND1-224, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-224ENST00000530068 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.57□□□□□ -0.24
CTNND1-224ENST00000530068 ARRDC4Q8NCT1 418 aa13.57□□□□□ -0.24
CTNND1-224ENST00000530068 KIAA1683Q9H0B3 1180 aa13.57□□□□□ -0.24
CTNND1-224ENST00000530068 CABP5Q9NP86 173 aa13.57□□□□□ -0.24
CTNND1-224ENST00000530068 SAP30BPQ9UHR5 308 aaKnown RBP13.57□□□□□ -0.24
CTNND1-224ENST00000530068 DNM1LO00429 736 aa13.56□□□□□ -0.24
CTNND1-224ENST00000530068 PEX10O60683 326 aa13.56□□□□□ -0.24
CTNND1-224ENST00000530068 TNNI3KQ59H18 835 aa13.56□□□□□ -0.24
CTNND1-224ENST00000530068 ZNF697Q5TEC3 545 aa13.56□□□□□ -0.24
CTNND1-224ENST00000530068 TATDN1Q6P1N9 297 aa13.56□□□□□ -0.24
CTNND1-224ENST00000530068 CATSPERGQ6ZRH7 1159 aa13.56□□□□□ -0.24
CTNND1-224ENST00000530068 EHD4Q9H223 541 aa13.56□□□□□ -0.24
CTNND1-224ENST00000530068 SERPINB13Q9UIV8 391 aa13.56□□□□□ -0.24
CTNND1-224ENST00000530068 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.56□□□□□ -0.24
CTNND1-224ENST00000530068 FPGT-TNNI3KV9GXZ4 949 aa13.56□□□□□ -0.24
CTNND1-224ENST00000530068 ALPK3Q96L96 1907 aa13.56□□□□□ -0.24
CTNND1-224ENST00000530068 DDX60LQ5H9U9 1706 aaKnown RBP13.56□□□□□ -0.24
CTNND1-224ENST00000530068 PNMA6EA0A0J9YXQ4 647 aa13.55□□□□□ -0.24
CTNND1-224ENST00000530068 STRNO43815 780 aa13.55□□□□□ -0.24
CTNND1-224ENST00000530068 CYP2E1P05181 493 aaPredicted RBP13.55□□□□□ -0.24
CTNND1-224ENST00000530068 CYP7A1P22680 504 aa13.55□□□□□ -0.24
CTNND1-224ENST00000530068 USP5P45974 858 aa13.55□□□□□ -0.24
CTNND1-224ENST00000530068 GRB14Q14449 540 aa13.55□□□□□ -0.24
CTNND1-224ENST00000530068 CERKLQ49MI3 558 aaPredicted RBP13.55□□□□□ -0.24
CTNND1-224ENST00000530068 COL25A1Q9BXS0 654 aaPredicted RBP13.55□□□□□ -0.24
CTNND1-224ENST00000530068 SLC5A4Q9NY91 659 aa13.55□□□□□ -0.24
CTNND1-224ENST00000530068 KBTBD13C9JR72 458 aa13.54□□□□□ -0.24
CTNND1-224ENST00000530068 CNMDO75829 334 aa13.54□□□□□ -0.24
CTNND1-224ENST00000530068 ZAP70P43403 619 aa13.54□□□□□ -0.24
CTNND1-224ENST00000530068 RTP1P59025 263 aa13.54□□□□□ -0.24
CTNND1-224ENST00000530068 RAB3GAP1Q15042 981 aa13.54□□□□□ -0.24
CTNND1-224ENST00000530068 ZYXQ15942 572 aaKnown RBP13.54□□□□□ -0.24
CTNND1-224ENST00000530068 ABCB5Q2M3G0 1257 aa13.54□□□□□ -0.24
CTNND1-224ENST00000530068 DPP9Q86TI2 863 aa13.54□□□□□ -0.24
CTNND1-224ENST00000530068 DBNDD2Q9BQY9 259 aa13.54□□□□□ -0.24
CTNND1-224ENST00000530068 HOXC10Q9NYD6 342 aa13.54□□□□□ -0.24
CTNND1-224ENST00000530068 IDH1O75874 414 aaKnown RBP13.53□□□□□ -0.24
CTNND1-224ENST00000530068 VCAM1P19320 739 aa13.53□□□□□ -0.24
CTNND1-224ENST00000530068 ATN1P54259 1190 aaPredicted RBP13.53□□□□□ -0.24
CTNND1-224ENST00000530068 DYNLL1P63167 89 aaKnown RBP13.53□□□□□ -0.24
CTNND1-224ENST00000530068 SHROOM1Q2M3G4 852 aaPredicted RBP13.53□□□□□ -0.24
CTNND1-224ENST00000530068 OLFML2BQ68BL8 750 aa13.53□□□□□ -0.24
CTNND1-224ENST00000530068 POTEEQ6S8J3 1075 aa13.53□□□□□ -0.24
CTNND1-224ENST00000530068 ADGRA1Q86SQ6 560 aa13.53□□□□□ -0.24
CTNND1-224ENST00000530068 GUCD1Q96NT3 240 aa13.53□□□□□ -0.24
CTNND1-224ENST00000530068 FLRT1Q9NZU1 646 aa13.53□□□□□ -0.24
CTNND1-224ENST00000530068 SPDYE16A6NNV3 312 aaPredicted RBP13.52□□□□□ -0.25
CTNND1-224ENST00000530068 TRIM27P14373 513 aa13.52□□□□□ -0.25
CTNND1-224ENST00000530068 CYP2C19P33261 490 aa13.52□□□□□ -0.25
CTNND1-224ENST00000530068 MAP3K12Q12852 859 aa13.52□□□□□ -0.25
CTNND1-224ENST00000530068 POLA2Q14181 598 aa13.52□□□□□ -0.25
CTNND1-224ENST00000530068 MB21D1Q8N884 522 aa13.52□□□□□ -0.25
CTNND1-224ENST00000530068 SHCBP1Q8NEM2 672 aa13.52□□□□□ -0.25
CTNND1-224ENST00000530068 RPAP3Q9H6T3 665 aaPredicted RBP13.52□□□□□ -0.25
CTNND1-224ENST00000530068 PIH1D3Q9NQM4 214 aaKnown RBP13.52□□□□□ -0.25
CTNND1-224ENST00000530068 BTBD7Q9P203 1132 aa13.52□□□□□ -0.25
CTNND1-224ENST00000530068 ATP11BQ9Y2G3 1177 aa13.52□□□□□ -0.25
CTNND1-224ENST00000530068 NDUFB9Q9Y6M9 179 aa13.52□□□□□ -0.25
CTNND1-224ENST00000530068 PLXNB2O15031 1838 aa13.52□□□□□ -0.25
CTNND1-224ENST00000530068 SEPT4O43236 478 aa13.51□□□□□ -0.25
CTNND1-224ENST00000530068 SURF6O75683 361 aaKnown RBP13.51□□□□□ -0.25
CTNND1-224ENST00000530068 CYBAP13498 195 aa13.51□□□□□ -0.25
CTNND1-224ENST00000530068 SMAD3P84022 425 aaKnown RBP13.51□□□□□ -0.25
CTNND1-224ENST00000530068 ATP8B2P98198 1209 aa13.51□□□□□ -0.25
CTNND1-224ENST00000530068 COG2Q14746 738 aa13.51□□□□□ -0.25
CTNND1-224ENST00000530068 SLC39A5Q6ZMH5 540 aa13.51□□□□□ -0.25
CTNND1-224ENST00000530068 NPLOC4Q8TAT6 608 aa13.51□□□□□ -0.25
CTNND1-224ENST00000530068 SSH3Q8TE77 659 aa13.51□□□□□ -0.25
CTNND1-224ENST00000530068 FAM161BQ96MY7 647 aa13.51□□□□□ -0.25
CTNND1-224ENST00000530068 ATAD5Q96QE3 1844 aa13.5□□□□□ -0.25
CTNND1-224ENST00000530068 POLR3DP05423 398 aaPredicted RBP13.5□□□□□ -0.25
CTNND1-224ENST00000530068 ADORA2AP29274 412 aa13.5□□□□□ -0.25
CTNND1-224ENST00000530068 GJC2Q5T442 439 aaPredicted RBP13.5□□□□□ -0.25
CTNND1-224ENST00000530068 ABRAQ8N0Z2 381 aa13.5□□□□□ -0.25
CTNND1-224ENST00000530068 MAGEB6Q8N7X4 407 aa13.5□□□□□ -0.25
CTNND1-224ENST00000530068 MIGA1Q8NAN2 632 aa13.5□□□□□ -0.25
CTNND1-224ENST00000530068 ACER1Q8TDN7 264 aa13.5□□□□□ -0.25
CTNND1-224ENST00000530068 FRAT1Q92837 279 aaPredicted RBP13.5□□□□□ -0.25
CTNND1-224ENST00000530068 MROH8Q9H579 483 aa13.5□□□□□ -0.25
CTNND1-224ENST00000530068 NOP58Q9Y2X3 529 aaKnown RBP13.5□□□□□ -0.25
CTNND1-224ENST00000530068 TMEM265A0A087WTH1 108 aa13.49□□□□□ -0.25
CTNND1-224ENST00000530068 IGHA2P01877 340 aa13.49□□□□□ -0.25
CTNND1-224ENST00000530068 C1orf53Q5VUE5 145 aa13.49□□□□□ -0.25
CTNND1-224ENST00000530068 TRPV1Q8NER1 839 aa13.49□□□□□ -0.25
CTNND1-224ENST00000530068 MAFAQ8NHW3 353 aaPredicted RBP13.49□□□□□ -0.25
CTNND1-224ENST00000530068 CDX2Q99626 313 aaPredicted RBP13.49□□□□□ -0.25
CTNND1-224ENST00000530068 MOV10L1Q9BXT6 1211 aaKnown RBP13.49□□□□□ -0.25
CTNND1-224ENST00000530068 CRNKL1Q9BZJ0 848 aaKnown RBP13.49□□□□□ -0.25
CTNND1-224ENST00000530068 SPATC1LQ9H0A9 340 aa13.49□□□□□ -0.25
CTNND1-224ENST00000530068 SEMA6BQ9H3T3 888 aa13.49□□□□□ -0.25
CTNND1-224ENST00000530068 PRDM5Q9NQX1 630 aaPredicted RBP13.49□□□□□ -0.25
CTNND1-224ENST00000530068 NRBP1Q9UHY1 535 aa13.49□□□□□ -0.25
CTNND1-224ENST00000530068 DBNLQ9UJU6 430 aaKnown RBP13.49□□□□□ -0.25
CTNND1-224ENST00000530068 TTC28Q96AY4 2481 aa13.49□□□□□ -0.25
CTNND1-224ENST00000530068 SHMT1P34896 483 aa13.48□□□□□ -0.25
CTNND1-224ENST00000530068 SNX17Q15036 470 aa13.48□□□□□ -0.25
CTNND1-224ENST00000530068 TTF1Q15361 905 aaPredicted RBP13.48□□□□□ -0.25
CTNND1-224ENST00000530068 SHHQ15465 462 aa13.48□□□□□ -0.25
CTNND1-224ENST00000530068 SYMPKQ92797 1274 aaKnown RBP13.48□□□□□ -0.25
CTNND1-224ENST00000530068 CLUAP1Q96AJ1 413 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms