RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 A0A1W2PRG0 241 aa19.24■□□□□ 0.67
TSPAN4-218ENST00000529566 HIP1O00291 1037 aa19.24■□□□□ 0.67
TSPAN4-218ENST00000529566 MPHOSPH10O00566 681 aaKnown RBP19.24■□□□□ 0.67
TSPAN4-218ENST00000529566 FGAP02671 866 aa19.24■□□□□ 0.67
TSPAN4-218ENST00000529566 HOXA7P31268 230 aaPredicted RBP19.24■□□□□ 0.67
TSPAN4-218ENST00000529566 PPARAQ07869 468 aa19.24■□□□□ 0.67
TSPAN4-218ENST00000529566 CWC27Q6UX04 472 aaKnown RBP19.24■□□□□ 0.67
TSPAN4-218ENST00000529566 CTU1Q7Z7A3 348 aaKnown RBP19.24■□□□□ 0.67
TSPAN4-218ENST00000529566 STK11IPQ8N1F8 1099 aa19.24■□□□□ 0.67
TSPAN4-218ENST00000529566 C12orf42Q96LP6 360 aa19.24■□□□□ 0.67
TSPAN4-218ENST00000529566 PARK7Q99497 189 aaKnown RBP19.24■□□□□ 0.67
TSPAN4-218ENST00000529566 DIAPH3Q9NSV4 1193 aa19.24■□□□□ 0.67
TSPAN4-218ENST00000529566 CPA4Q9UI42 421 aa19.24■□□□□ 0.67
TSPAN4-218ENST00000529566 BCRP11274 1271 aa19.23■□□□□ 0.67
TSPAN4-218ENST00000529566 USP17L2Q6R6M4 530 aa19.23■□□□□ 0.67
TSPAN4-218ENST00000529566 CLEC10AQ8IUN9 316 aa19.23■□□□□ 0.67
TSPAN4-218ENST00000529566 CCDC136Q96JN2 1154 aa19.23■□□□□ 0.67
TSPAN4-218ENST00000529566 MCOLN1Q9GZU1 580 aa19.23■□□□□ 0.67
TSPAN4-218ENST00000529566 IL25Q9H293 177 aa19.23■□□□□ 0.67
TSPAN4-218ENST00000529566 TMOD4Q9NZQ9 345 aa19.23■□□□□ 0.67
TSPAN4-218ENST00000529566 ANAPC4Q9UJX5 808 aa19.23■□□□□ 0.67
TSPAN4-218ENST00000529566 TACC3Q9Y6A5 838 aa19.23■□□□□ 0.67
TSPAN4-218ENST00000529566 NEFLP07196 543 aa19.22■□□□□ 0.67
TSPAN4-218ENST00000529566 CD99L2Q8TCZ2 262 aa19.22■□□□□ 0.67
TSPAN4-218ENST00000529566 ASCC2Q9H1I8 757 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-218ENST00000529566 MKNK2Q9HBH9 465 aa19.22■□□□□ 0.67
TSPAN4-218ENST00000529566 ZMYM6O95789 1325 aa19.22■□□□□ 0.67
TSPAN4-218ENST00000529566 MYH8P13535 1937 aa19.21■□□□□ 0.67
TSPAN4-218ENST00000529566 PRDM1O75626 825 aa19.21■□□□□ 0.67
TSPAN4-218ENST00000529566 CHMLP26374 656 aa19.21■□□□□ 0.67
TSPAN4-218ENST00000529566 USP14P54578 494 aa19.21■□□□□ 0.67
TSPAN4-218ENST00000529566 ERO1AQ96HE7 468 aa19.21■□□□□ 0.67
TSPAN4-218ENST00000529566 KANSL2Q9H9L4 492 aa19.21■□□□□ 0.67
TSPAN4-218ENST00000529566 INCENPQ9NQS7 918 aa19.21■□□□□ 0.67
TSPAN4-218ENST00000529566 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.21■□□□□ 0.67
TSPAN4-218ENST00000529566 GREB1LQ9C091 1923 aaPredicted RBP19.2■□□□□ 0.66
TSPAN4-218ENST00000529566 IGKV6D-41A0A0C4DH26 115 aa19.2■□□□□ 0.66
TSPAN4-218ENST00000529566 FGRP09769 529 aa19.2■□□□□ 0.66
TSPAN4-218ENST00000529566 CTGFP29279 349 aa19.2■□□□□ 0.66
TSPAN4-218ENST00000529566 MFAP1P55081 439 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-218ENST00000529566 LACTBP83111 547 aaPredicted RBP19.2■□□□□ 0.66
TSPAN4-218ENST00000529566 ICA1Q05084 483 aa19.2■□□□□ 0.66
TSPAN4-218ENST00000529566 CTDSPL2Q05D32 466 aa19.2■□□□□ 0.66
TSPAN4-218ENST00000529566 PABPC4Q13310 644 aaKnown RBP eCLIP19.2■□□□□ 0.66
TSPAN4-218ENST00000529566 ZYXQ15942 572 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-218ENST00000529566 KIAA1755Q5JYT7 1200 aa19.2■□□□□ 0.66
TSPAN4-218ENST00000529566 POTEEQ6S8J3 1075 aa19.2■□□□□ 0.66
TSPAN4-218ENST00000529566 OTOP1Q7RTM1 612 aa19.2■□□□□ 0.66
TSPAN4-218ENST00000529566 FEZ1Q99689 392 aa19.2■□□□□ 0.66
TSPAN4-218ENST00000529566 TMX2Q9Y320 296 aa19.2■□□□□ 0.66
TSPAN4-218ENST00000529566 EEF2P13639 858 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-218ENST00000529566 PDE4BQ07343 736 aa19.19■□□□□ 0.66
TSPAN4-218ENST00000529566 P2RX7Q99572 595 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-218ENST00000529566 ARHGAP39Q9C0H5 1083 aa19.19■□□□□ 0.66
TSPAN4-218ENST00000529566 NBPF3Q9H094 633 aa19.19■□□□□ 0.66
TSPAN4-218ENST00000529566 ZNF287Q9HBT7 754 aa19.19■□□□□ 0.66
TSPAN4-218ENST00000529566 PNMA3Q9UL41 463 aa19.19■□□□□ 0.66
TSPAN4-218ENST00000529566 SLC3A2P08195 630 aaKnown RBP19.18■□□□□ 0.66
TSPAN4-218ENST00000529566 VCAM1P19320 739 aa19.18■□□□□ 0.66
TSPAN4-218ENST00000529566 OSBPP22059 807 aa19.18■□□□□ 0.66
TSPAN4-218ENST00000529566 PKN2Q16513 984 aaKnown RBP19.18■□□□□ 0.66
TSPAN4-218ENST00000529566 ZNF444Q8N0Y2 327 aaPredicted RBP19.18■□□□□ 0.66
TSPAN4-218ENST00000529566 SMCR8Q8TEV9 937 aaPredicted RBP19.18■□□□□ 0.66
TSPAN4-218ENST00000529566 HTTP42858 3142 aa19.17■□□□□ 0.66
TSPAN4-218ENST00000529566 ERICH6BQ5W0A0 696 aa19.17■□□□□ 0.66
TSPAN4-218ENST00000529566 CATSPERGQ6ZRH7 1159 aa19.17■□□□□ 0.66
TSPAN4-218ENST00000529566 NEDD1Q8NHV4 660 aa19.17■□□□□ 0.66
TSPAN4-218ENST00000529566 ABHD8Q96I13 439 aa19.17■□□□□ 0.66
TSPAN4-218ENST00000529566 DSCC1Q9BVC3 393 aa19.17■□□□□ 0.66
TSPAN4-218ENST00000529566 ARHGEF10LQ9HCE6 1279 aa19.17■□□□□ 0.66
TSPAN4-218ENST00000529566 TRIM17Q9Y577 477 aa19.17■□□□□ 0.66
TSPAN4-218ENST00000529566 PLIN4Q96Q06 1357 aa19.17■□□□□ 0.66
TSPAN4-218ENST00000529566 USP17L15C9J2P7 530 aa19.16■□□□□ 0.66
TSPAN4-218ENST00000529566 USP17L13C9JLJ4 530 aa19.16■□□□□ 0.66
TSPAN4-218ENST00000529566 USP17L11C9JVI0 530 aa19.16■□□□□ 0.66
TSPAN4-218ENST00000529566 USP17L18D6R9N7 530 aa19.16■□□□□ 0.66
TSPAN4-218ENST00000529566 USP17L22D6RA61 530 aa19.16■□□□□ 0.66
TSPAN4-218ENST00000529566 USP17L17D6RBQ6 530 aa19.16■□□□□ 0.66
TSPAN4-218ENST00000529566 USP17L19D6RCP7 530 aa19.16■□□□□ 0.66
TSPAN4-218ENST00000529566 USP17L20D6RJB6 530 aa19.16■□□□□ 0.66
TSPAN4-218ENST00000529566 ORC4O43929 436 aa19.16■□□□□ 0.66
TSPAN4-218ENST00000529566 GCLCP48506 637 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-218ENST00000529566 USP17L24Q0WX57 530 aa19.16■□□□□ 0.66
TSPAN4-218ENST00000529566 FAM47AQ5JRC9 791 aa19.16■□□□□ 0.66
TSPAN4-218ENST00000529566 ANKRD13CQ8N6S4 541 aa19.16■□□□□ 0.66
TSPAN4-218ENST00000529566 TRIM47Q96LD4 638 aa19.16■□□□□ 0.66
TSPAN4-218ENST00000529566 VCPKMTQ9H867 229 aa19.16■□□□□ 0.66
TSPAN4-218ENST00000529566 EFCC1Q9HA90 598 aa19.16■□□□□ 0.66
TSPAN4-218ENST00000529566 NYAP2Q9P242 653 aa19.16■□□□□ 0.66
TSPAN4-218ENST00000529566 HAND2P61296 217 aa19.15■□□□□ 0.66
TSPAN4-218ENST00000529566 HERVK_113P62684 666 aa19.15■□□□□ 0.66
TSPAN4-218ENST00000529566 IRX3P78415 501 aaPredicted RBP19.15■□□□□ 0.66
TSPAN4-218ENST00000529566 TFAP4Q01664 338 aa19.15■□□□□ 0.66
TSPAN4-218ENST00000529566 BMP2KLQ5H9B9 411 aa19.15■□□□□ 0.66
TSPAN4-218ENST00000529566 LPAR1Q92633 364 aa19.15■□□□□ 0.66
TSPAN4-218ENST00000529566 MKL1Q969V6 931 aa19.15■□□□□ 0.66
TSPAN4-218ENST00000529566 CEP95Q96GE4 821 aa19.15■□□□□ 0.66
TSPAN4-218ENST00000529566 RPAP3Q9H6T3 665 aaPredicted RBP19.15■□□□□ 0.66
TSPAN4-218ENST00000529566 MTMR4Q9NYA4 1195 aa19.15■□□□□ 0.66
TSPAN4-218ENST00000529566 RBPJLQ9UBG7 517 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms