RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 TRIM39Q9HCM9 518 aa4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 LRP2BPQ9P2M1 347 aa4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 SUCOQ9UBS9 1254 aaKnown RBP4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 NAGPAQ9UK23 515 aa4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 COMMD10Q9Y6G5 202 aa4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 E2F8A0AVK6 867 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 ADARB2-AS1A8MUL3 147 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 GPR39O43194 453 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 PRODHO43272 600 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 BRINP1O60477 761 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 MYL1P05976 194 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 ITGAVP06756 1048 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 EPHX1P07099 455 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 PABPC1P11940 636 aaKnown RBP4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 ATF3P18847 181 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 MAOBP27338 520 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 GRIA2P42262 883 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 ARL4DP49703 201 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 PIP4K2BP78356 416 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 RING1Q06587 406 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 ITKQ08881 620 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 C19orf57Q0VDD7 668 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 OS9Q13438 667 aaPredicted RBP4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 HDAC1Q13547 482 aaPredicted RBP4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 PCBP1Q15365 356 aaKnown RBP eCLIP4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 KIF4BQ2VIQ3 1234 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 ZC3H12AQ5D1E8 599 aaKnown RBP4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 GDF6Q6KF10 455 aaPredicted RBP4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 NSMFQ6X4W1 530 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 PPFIBP1Q86W92 1011 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 C12orf40Q86WS4 652 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 MCATQ8IVS2 390 aaKnown RBP4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 SPNS2Q8IVW8 549 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 SLFN12Q8IYM2 578 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 ZNF513Q8N8E2 541 aaPredicted RBP4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 LRRN4CLQ8ND94 238 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 SLC7A14Q8TBB6 771 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 WNT8BQ93098 351 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 OSBP2Q969R2 916 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 WDR89Q96FK6 387 aaPredicted RBP4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 SLC6A18Q96N87 628 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 CAMKK2Q96RR4 588 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 WNT10AQ9GZT5 417 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 CCDC8Q9H0W5 538 aaPredicted RBP4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 CDH19Q9H159 772 aa4.67□□□□□ -1.66
AMBRA1-208ENST00000529558 PRAMEF27A3QJZ7 478 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 C2CD2LO14523 706 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 RGS13O14921 159 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 ASLP04424 464 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 TP53P04637 393 aaPredicted RBP4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 C6orf222P0C671 652 aaPredicted RBP4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 LIG1P18858 919 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 NEK4P51957 841 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 YARSP54577 528 aaKnown RBP4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 PCBP4P57723 403 aaKnown RBP4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 HNRNPUQ00839 825 aaKnown RBP eCLIP4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 PIN1Q13526 163 aaPredicted RBP4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 STAT4Q14765 748 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 HEATR6Q6AI08 1181 aaKnown RBP4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 ZNF227Q86WZ6 799 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 PASD1Q8IV76 773 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 SAMD3Q8N6K7 520 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 FAM13CQ8NE31 585 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 GSTCDQ8NEC7 633 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 SLC7A3Q8WY07 619 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 HAUS7Q99871 368 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 PUS7LQ9H0K6 701 aaKnown RBP4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 ZNF700Q9H0M5 742 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 OSGEPQ9NPF4 335 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 AVENQ9NQS1 362 aaPredicted RBP4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 CHST12Q9NRB3 414 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 SFMBT1Q9UHJ3 866 aa4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 TNPO3Q9Y5L0 923 aaKnown RBP4.66□□□□□ -1.66
AMBRA1-208ENST00000529558 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 FAM187AA6NFU0 413 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 SOBPA7XYQ1 873 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 C9IYK1 514 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 CBFA2T2O43439 604 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 EFCAB14O75071 495 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 UBOX5O94941 541 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 CTSBP07858 339 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 ITGA6P23229 1130 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 CDC25BP30305 580 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 ADH7P40394 386 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 ETF1P62495 437 aaKnown RBP4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 GABREP78334 506 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 VPS72Q15906 364 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 SYCP2LQ5T4T6 812 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 NXNQ6DKJ4 435 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 PKN3Q6P5Z2 889 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 APBB1IPQ7Z5R6 666 aaPredicted RBP4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 SPATS2Q86XZ4 545 aaKnown RBP4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 TCEAL8Q8IYN2 117 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 PHACTR4Q8IZ21 702 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 IL22RA1Q8N6P7 574 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 SMARCC1Q92922 1105 aaPredicted RBP4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 CHMP4CQ96CF2 233 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 EVI5LQ96CN4 794 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 HOOK2Q96ED9 719 aa4.65□□□□□ -1.67
AMBRA1-208ENST00000529558 MTMR8Q96EF0 704 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms