RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 POTEB2H3BUK9 544 aa16.49■□□□□ 0.23
HIF3A-212ENST00000529205 DNM1LO00429 736 aa16.49■□□□□ 0.23
HIF3A-212ENST00000529205 CYP2E1P05181 493 aaPredicted RBP16.49■□□□□ 0.23
HIF3A-212ENST00000529205 RAB3GAP1Q15042 981 aa16.49■□□□□ 0.23
HIF3A-212ENST00000529205 TNNI3KQ59H18 835 aa16.49■□□□□ 0.23
HIF3A-212ENST00000529205 CATSPERGQ6ZRH7 1159 aa16.49■□□□□ 0.23
HIF3A-212ENST00000529205 TTC6Q86TZ1 520 aa16.49■□□□□ 0.23
HIF3A-212ENST00000529205 ARRDC4Q8NCT1 418 aa16.49■□□□□ 0.23
HIF3A-212ENST00000529205 ZNF512BQ96KM6 892 aaPredicted RBP16.49■□□□□ 0.23
HIF3A-212ENST00000529205 FPGT-TNNI3KV9GXZ4 949 aa16.49■□□□□ 0.23
HIF3A-212ENST00000529205 CYP7A1P22680 504 aa16.48■□□□□ 0.23
HIF3A-212ENST00000529205 ATN1P54259 1190 aaPredicted RBP16.48■□□□□ 0.23
HIF3A-212ENST00000529205 TATDN1Q6P1N9 297 aa16.48■□□□□ 0.23
HIF3A-212ENST00000529205 ADGRA1Q86SQ6 560 aa16.48■□□□□ 0.23
HIF3A-212ENST00000529205 DPP9Q86TI2 863 aa16.48■□□□□ 0.23
HIF3A-212ENST00000529205 COL25A1Q9BXS0 654 aaPredicted RBP16.48■□□□□ 0.23
HIF3A-212ENST00000529205 SERPINB13Q9UIV8 391 aa16.48■□□□□ 0.23
HIF3A-212ENST00000529205 NDUFB9Q9Y6M9 179 aa16.48■□□□□ 0.23
HIF3A-212ENST00000529205 ZAP70P43403 619 aa16.47■□□□□ 0.23
HIF3A-212ENST00000529205 ABCB5Q2M3G0 1257 aa16.47■□□□□ 0.23
HIF3A-212ENST00000529205 SHROOM1Q2M3G4 852 aaPredicted RBP16.47■□□□□ 0.23
HIF3A-212ENST00000529205 CERKLQ49MI3 558 aaPredicted RBP16.47■□□□□ 0.23
HIF3A-212ENST00000529205 LBX2Q6XYB7 198 aa16.47■□□□□ 0.23
HIF3A-212ENST00000529205 FRAT1Q92837 279 aaPredicted RBP16.47■□□□□ 0.23
HIF3A-212ENST00000529205 FAM161BQ96MY7 647 aa16.47■□□□□ 0.23
HIF3A-212ENST00000529205 DBNDD2Q9BQY9 259 aa16.47■□□□□ 0.23
HIF3A-212ENST00000529205 KIAA1683Q9H0B3 1180 aa16.47■□□□□ 0.23
HIF3A-212ENST00000529205 EHD4Q9H223 541 aa16.47■□□□□ 0.23
HIF3A-212ENST00000529205 SLC5A4Q9NY91 659 aa16.47■□□□□ 0.23
HIF3A-212ENST00000529205 KBTBD13C9JR72 458 aa16.46■□□□□ 0.23
HIF3A-212ENST00000529205 CNMDO75829 334 aa16.46■□□□□ 0.23
HIF3A-212ENST00000529205 IDH1O75874 414 aaKnown RBP16.46■□□□□ 0.23
HIF3A-212ENST00000529205 HOXC6P09630 235 aa16.46■□□□□ 0.23
HIF3A-212ENST00000529205 DYNLL1P63167 89 aaKnown RBP16.46■□□□□ 0.23
HIF3A-212ENST00000529205 GRB14Q14449 540 aa16.46■□□□□ 0.23
HIF3A-212ENST00000529205 FLRT1Q9NZU1 646 aa16.46■□□□□ 0.23
HIF3A-212ENST00000529205 ATP11BQ9Y2G3 1177 aa16.46■□□□□ 0.23
HIF3A-212ENST00000529205 MAST2Q6P0Q8 1798 aa16.46■□□□□ 0.22
HIF3A-212ENST00000529205 SIPA1L1O43166 1804 aa16.45■□□□□ 0.22
HIF3A-212ENST00000529205 STRNO43815 780 aa16.45■□□□□ 0.22
HIF3A-212ENST00000529205 SURF6O75683 361 aaKnown RBP16.45■□□□□ 0.22
HIF3A-212ENST00000529205 VCAM1P19320 739 aa16.45■□□□□ 0.22
HIF3A-212ENST00000529205 CYP2C19P33261 490 aa16.45■□□□□ 0.22
HIF3A-212ENST00000529205 RTP1P59025 263 aa16.45■□□□□ 0.22
HIF3A-212ENST00000529205 TMED8Q6PL24 325 aaPredicted RBP16.45■□□□□ 0.22
HIF3A-212ENST00000529205 GUCD1Q96NT3 240 aa16.45■□□□□ 0.22
HIF3A-212ENST00000529205 HOXC10Q9NYD6 342 aa16.45■□□□□ 0.22
HIF3A-212ENST00000529205 COL6A3P12111 3177 aa16.44■□□□□ 0.22
HIF3A-212ENST00000529205 TRIM27P14373 513 aa16.44■□□□□ 0.22
HIF3A-212ENST00000529205 MAP3K12Q12852 859 aa16.44■□□□□ 0.22
HIF3A-212ENST00000529205 POTEEQ6S8J3 1075 aa16.44■□□□□ 0.22
HIF3A-212ENST00000529205 MIGA1Q8NAN2 632 aa16.44■□□□□ 0.22
HIF3A-212ENST00000529205 NPLOC4Q8TAT6 608 aa16.44■□□□□ 0.22
HIF3A-212ENST00000529205 RPAP3Q9H6T3 665 aaPredicted RBP16.44■□□□□ 0.22
HIF3A-212ENST00000529205 PIH1D3Q9NQM4 214 aaKnown RBP16.44■□□□□ 0.22
HIF3A-212ENST00000529205 BTBD7Q9P203 1132 aa16.44■□□□□ 0.22
HIF3A-212ENST00000529205 LAMA3Q16787 3333 aa16.44■□□□□ 0.22
HIF3A-212ENST00000529205 MYCNP04198 464 aaPredicted RBP16.43■□□□□ 0.22
HIF3A-212ENST00000529205 POLR3DP05423 398 aaPredicted RBP16.43■□□□□ 0.22
HIF3A-212ENST00000529205 COG2Q14746 738 aa16.43■□□□□ 0.22
HIF3A-212ENST00000529205 GJC2Q5T442 439 aaPredicted RBP16.43■□□□□ 0.22
HIF3A-212ENST00000529205 OLFML2BQ68BL8 750 aa16.43■□□□□ 0.22
HIF3A-212ENST00000529205 SLC39A5Q6ZMH5 540 aa16.43■□□□□ 0.22
HIF3A-212ENST00000529205 MAGEB6Q8N7X4 407 aa16.43■□□□□ 0.22
HIF3A-212ENST00000529205 CLUAP1Q96AJ1 413 aa16.43■□□□□ 0.22
HIF3A-212ENST00000529205 PRDM5Q9NQX1 630 aaPredicted RBP16.43■□□□□ 0.22
HIF3A-212ENST00000529205 SPDYE16A6NNV3 312 aaPredicted RBP16.42■□□□□ 0.22
HIF3A-212ENST00000529205 CYBAP13498 195 aa16.42■□□□□ 0.22
HIF3A-212ENST00000529205 ATP8B2P98198 1209 aa16.42■□□□□ 0.22
HIF3A-212ENST00000529205 POLA2Q14181 598 aa16.42■□□□□ 0.22
HIF3A-212ENST00000529205 ACER1Q8TDN7 264 aa16.42■□□□□ 0.22
HIF3A-212ENST00000529205 FOCADQ5VW36 1801 aa16.41■□□□□ 0.22
HIF3A-212ENST00000529205 MPHOSPH10O00566 681 aaKnown RBP16.41■□□□□ 0.22
HIF3A-212ENST00000529205 SEPT4O43236 478 aa16.41■□□□□ 0.22
HIF3A-212ENST00000529205 ADORA2AP29274 412 aa16.41■□□□□ 0.22
HIF3A-212ENST00000529205 SHHQ15465 462 aa16.41■□□□□ 0.22
HIF3A-212ENST00000529205 SHCBP1Q8NEM2 672 aa16.41■□□□□ 0.22
HIF3A-212ENST00000529205 SSH3Q8TE77 659 aa16.41■□□□□ 0.22
HIF3A-212ENST00000529205 CDX2Q99626 313 aaPredicted RBP16.41■□□□□ 0.22
HIF3A-212ENST00000529205 TANGO6Q9C0B7 1094 aa16.41■□□□□ 0.22
HIF3A-212ENST00000529205 SMAD3P84022 425 aaKnown RBP16.4■□□□□ 0.22
HIF3A-212ENST00000529205 MB21D1Q8N884 522 aa16.4■□□□□ 0.22
HIF3A-212ENST00000529205 MAFAQ8NHW3 353 aaPredicted RBP16.4■□□□□ 0.22
HIF3A-212ENST00000529205 MOV10L1Q9BXT6 1211 aaKnown RBP16.4■□□□□ 0.22
HIF3A-212ENST00000529205 SPATC1LQ9H0A9 340 aa16.4■□□□□ 0.22
HIF3A-212ENST00000529205 CCDC8Q9H0W5 538 aaPredicted RBP16.4■□□□□ 0.22
HIF3A-212ENST00000529205 SEMA6BQ9H3T3 888 aa16.4■□□□□ 0.22
HIF3A-212ENST00000529205 MROH8Q9H579 483 aa16.4■□□□□ 0.22
HIF3A-212ENST00000529205 DBNLQ9UJU6 430 aaKnown RBP16.4■□□□□ 0.22
HIF3A-212ENST00000529205 BCAR3O75815 825 aa16.39■□□□□ 0.21
HIF3A-212ENST00000529205 ERCC3P19447 782 aa16.39■□□□□ 0.21
HIF3A-212ENST00000529205 PLS1Q14651 629 aa16.39■□□□□ 0.21
HIF3A-212ENST00000529205 SEPT2Q15019 361 aa16.39■□□□□ 0.21
HIF3A-212ENST00000529205 ZKSCAN2Q63HK3 967 aa16.39■□□□□ 0.21
HIF3A-212ENST00000529205 TRPV1Q8NER1 839 aa16.39■□□□□ 0.21
HIF3A-212ENST00000529205 BADQ92934 168 aa16.39■□□□□ 0.21
HIF3A-212ENST00000529205 FRMPD3Q5JV73 1810 aa16.38■□□□□ 0.21
HIF3A-212ENST00000529205 CDK5RAP2Q96SN8 1893 aa16.38■□□□□ 0.21
HIF3A-212ENST00000529205 MAGEB6P1A0A0J9YX57 407 aa16.38■□□□□ 0.21
HIF3A-212ENST00000529205 SHMT1P34896 483 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms