RNA–Protein interactions for RNA: ENST00000528895.5

TM9SF1-207, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-207ENST00000528895 SLKQ9H2G2 1235 aaPredicted RBP13.82□□□□□ -0.2
TM9SF1-207ENST00000528895 KAT14Q9H8E8 782 aa13.82□□□□□ -0.2
TM9SF1-207ENST00000528895 SLC12A7Q9Y666 1083 aa13.82□□□□□ -0.2
TM9SF1-207ENST00000528895 FAM196BA6NMK8 535 aa13.81□□□□□ -0.2
TM9SF1-207ENST00000528895 CALM1P0DP23 149 aa13.81□□□□□ -0.2
TM9SF1-207ENST00000528895 CALM2P0DP24 149 aa13.81□□□□□ -0.2
TM9SF1-207ENST00000528895 CALM3P0DP25 149 aa13.81□□□□□ -0.2
TM9SF1-207ENST00000528895 AKR1B1P15121 316 aa13.81□□□□□ -0.2
TM9SF1-207ENST00000528895 NF2P35240 595 aa13.81□□□□□ -0.2
TM9SF1-207ENST00000528895 RCAN1P53805 252 aa13.81□□□□□ -0.2
TM9SF1-207ENST00000528895 EVCP57679 992 aa13.81□□□□□ -0.2
TM9SF1-207ENST00000528895 SEC23AQ15436 765 aa13.81□□□□□ -0.2
TM9SF1-207ENST00000528895 ABCB5Q2M3G0 1257 aa13.81□□□□□ -0.2
TM9SF1-207ENST00000528895 KRT26Q7Z3Y9 468 aa13.81□□□□□ -0.2
TM9SF1-207ENST00000528895 CATIPQ7Z7H3 387 aa13.81□□□□□ -0.2
TM9SF1-207ENST00000528895 ZNF341Q9BYN7 854 aa13.81□□□□□ -0.2
TM9SF1-207ENST00000528895 PGAP2Q9UHJ9 254 aa13.81□□□□□ -0.2
TM9SF1-207ENST00000528895 STX8Q9UNK0 236 aa13.81□□□□□ -0.2
TM9SF1-207ENST00000528895 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.81□□□□□ -0.2
TM9SF1-207ENST00000528895 GREB1LQ9C091 1923 aaPredicted RBP13.8□□□□□ -0.2
TM9SF1-207ENST00000528895 ZBTB43O43298 467 aa13.8□□□□□ -0.2
TM9SF1-207ENST00000528895 DDAH1O94760 285 aa13.8□□□□□ -0.2
TM9SF1-207ENST00000528895 METAP2P50579 478 aaKnown RBP eCLIP13.8□□□□□ -0.2
TM9SF1-207ENST00000528895 CUL4AQ13619 759 aa13.8□□□□□ -0.2
TM9SF1-207ENST00000528895 ME3Q16798 604 aa13.8□□□□□ -0.2
TM9SF1-207ENST00000528895 ZNF654Q8IZM8 581 aa13.8□□□□□ -0.2
TM9SF1-207ENST00000528895 NKX2-3Q8TAU0 364 aa13.8□□□□□ -0.2
TM9SF1-207ENST00000528895 GTF3C6Q969F1 213 aa13.8□□□□□ -0.2
TM9SF1-207ENST00000528895 LARP6Q9BRS8 491 aaKnown RBP13.8□□□□□ -0.2
TM9SF1-207ENST00000528895 GPHNQ9NQX3 736 aaPredicted RBP13.8□□□□□ -0.2
TM9SF1-207ENST00000528895 GINM1Q9NU53 330 aa13.8□□□□□ -0.2
TM9SF1-207ENST00000528895 SCAF8Q9UPN6 1271 aaKnown RBP13.8□□□□□ -0.2
TM9SF1-207ENST00000528895 CLEC11AQ9Y240 323 aa13.8□□□□□ -0.2
TM9SF1-207ENST00000528895 NID2Q14112 1375 aa13.8□□□□□ -0.2
TM9SF1-207ENST00000528895 GOLGA8AA7E2F4 631 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 DHX16O60231 1041 aaKnown RBP13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 NMT2O60551 498 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 PFKFB2O60825 505 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 GDF11O95390 407 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 LARGE1O95461 756 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 TTLL1O95922 423 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 MAP3K10Q02779 954 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 ICA1Q05084 483 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 STK3Q13188 491 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 CPLX2Q6PUV4 134 aaKnown RBP13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 APOA5Q6Q788 366 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 CDC37L1Q7L3B6 337 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 MIGA2Q7L4E1 593 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 MICU3Q86XE3 530 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 CCDC83Q8IWF9 413 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 CDAN1Q8IWY9 1227 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 ANKS1AQ92625 1134 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 CEP95Q96GE4 821 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 INTS4Q96HW7 963 aaKnown RBP13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 KANSL2Q9H9L4 492 aa13.79□□□□□ -0.2
TM9SF1-207ENST00000528895 IGKV6D-41A0A0C4DH26 115 aa13.78□□□□□ -0.2
TM9SF1-207ENST00000528895 CCDC196A0A1B0GTZ2 297 aa13.78□□□□□ -0.2
TM9SF1-207ENST00000528895 ADM5C9JUS6 153 aa13.78□□□□□ -0.2
TM9SF1-207ENST00000528895 CDKL5O76039 1030 aa13.78□□□□□ -0.2
TM9SF1-207ENST00000528895 TOP1P11387 765 aaKnown RBP13.78□□□□□ -0.2
TM9SF1-207ENST00000528895 PDIA3P30101 505 aaKnown RBP13.78□□□□□ -0.2
TM9SF1-207ENST00000528895 SLC4A3P48751 1232 aa13.78□□□□□ -0.2
TM9SF1-207ENST00000528895 PPP2R5BQ15173 497 aa13.78□□□□□ -0.2
TM9SF1-207ENST00000528895 NBPF12Q5TAG4 269 aaPredicted RBP13.78□□□□□ -0.2
TM9SF1-207ENST00000528895 USP48Q86UV5 1035 aa13.78□□□□□ -0.2
TM9SF1-207ENST00000528895 LDHDQ86WU2 507 aa13.78□□□□□ -0.2
TM9SF1-207ENST00000528895 PNMA1Q8ND90 353 aa13.78□□□□□ -0.2
TM9SF1-207ENST00000528895 IL17RBQ9NRM6 502 aa13.78□□□□□ -0.2
TM9SF1-207ENST00000528895 MTMR4Q9NYA4 1195 aa13.78□□□□□ -0.2
TM9SF1-207ENST00000528895 BRPF3Q9ULD4 1205 aa13.78□□□□□ -0.2
TM9SF1-207ENST00000528895 ZBTB21Q9ULJ3 1066 aa13.78□□□□□ -0.2
TM9SF1-207ENST00000528895 SSC5DA1L4H1 1573 aa13.78□□□□□ -0.2
TM9SF1-207ENST00000528895 CPLX1O14810 134 aa13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 GH2P01242 217 aa13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 ASNSP08243 561 aa13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 CAP2P40123 477 aa13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 NOVP48745 357 aa13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 RAB3GAP1Q15042 981 aa13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 RTN1Q16799 776 aa13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 RCSD1Q6JBY9 416 aa13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 CHADLQ6NUI6 762 aa13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 CTCFLQ8NI51 663 aaPredicted RBP13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 NUP133Q8WUM0 1156 aa13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 LLPHQ9BRT6 129 aaKnown RBP13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 SH2D4AQ9H788 454 aa13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 SENP2Q9HC62 589 aa13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 ARHGEF10LQ9HCE6 1279 aa13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 CREBZFQ9NS37 354 aa13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 RBM28Q9NW13 759 aaKnown RBP13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 SYNPO2Q9UMS6 1093 aa13.77□□□□□ -0.21
TM9SF1-207ENST00000528895 DOCK1Q14185 1865 aa13.76□□□□□ -0.21
TM9SF1-207ENST00000528895 PPP1R12BO60237 982 aaPredicted RBP13.76□□□□□ -0.21
TM9SF1-207ENST00000528895 CTNND1O60716 968 aaKnown RBP13.76□□□□□ -0.21
TM9SF1-207ENST00000528895 POTEIP0CG38 1075 aa13.76□□□□□ -0.21
TM9SF1-207ENST00000528895 POTEJP0CG39 1038 aa13.76□□□□□ -0.21
TM9SF1-207ENST00000528895 SLURP2P0DP57 97 aa13.76□□□□□ -0.21
TM9SF1-207ENST00000528895 KIF5BP33176 963 aa13.76□□□□□ -0.21
TM9SF1-207ENST00000528895 IREB2P48200 963 aaKnown RBP13.76□□□□□ -0.21
TM9SF1-207ENST00000528895 ATP2B2Q01814 1243 aa13.76□□□□□ -0.21
TM9SF1-207ENST00000528895 SCRN1Q12765 414 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms