RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 STRBPQ96SI9 672 aaKnown RBP13.68□□□□□ -0.22
USF1-208ENST00000528768 RNF41Q9H4P4 317 aaPredicted RBP13.68□□□□□ -0.22
USF1-208ENST00000528768 ZFYVE28Q9HCC9 887 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 DDX19AQ9NUU7 478 aaKnown RBP13.68□□□□□ -0.22
USF1-208ENST00000528768 A0A0C4DFX4 3053 aa13.67□□□□□ -0.22
USF1-208ENST00000528768 KLF18A0A0U1RQI7 1052 aa13.67□□□□□ -0.22
USF1-208ENST00000528768 TCRBV5S4A2TA0A5A2 114 aa13.67□□□□□ -0.22
USF1-208ENST00000528768 GOLGA8BA8MQT2 603 aa13.67□□□□□ -0.22
USF1-208ENST00000528768 CCT2P78371 535 aaKnown RBP13.67□□□□□ -0.22
USF1-208ENST00000528768 RASGRF1Q13972 1273 aa13.67□□□□□ -0.22
USF1-208ENST00000528768 KIF22Q14807 665 aa13.67□□□□□ -0.22
USF1-208ENST00000528768 SART3Q15020 963 aaKnown RBP13.67□□□□□ -0.22
USF1-208ENST00000528768 DLGAP5Q15398 846 aa13.67□□□□□ -0.22
USF1-208ENST00000528768 MTA3Q9BTC8 594 aa13.67□□□□□ -0.22
USF1-208ENST00000528768 HTATIP2Q9BUP3 242 aa13.67□□□□□ -0.22
USF1-208ENST00000528768 DENND2AQ9ULE3 1009 aa13.67□□□□□ -0.22
USF1-208ENST00000528768 LEMD3Q9Y2U8 911 aa13.67□□□□□ -0.22
USF1-208ENST00000528768 NR2E3Q9Y5X4 410 aa13.67□□□□□ -0.22
USF1-208ENST00000528768 PTCH2Q9Y6C5 1203 aa13.67□□□□□ -0.22
USF1-208ENST00000528768 ZNF804BA4D1E1 1349 aa13.66□□□□□ -0.22
USF1-208ENST00000528768 CCDC192P0DO97 292 aa13.66□□□□□ -0.22
USF1-208ENST00000528768 KIAA0825Q8IV33 1275 aa13.66□□□□□ -0.22
USF1-208ENST00000528768 LEO1Q8WVC0 666 aaPredicted RBP13.66□□□□□ -0.22
USF1-208ENST00000528768 DPF3Q92784 378 aa13.66□□□□□ -0.22
USF1-208ENST00000528768 CLMNQ96JQ2 1002 aa13.66□□□□□ -0.22
USF1-208ENST00000528768 NUP62CLQ9H1M0 184 aa13.66□□□□□ -0.22
USF1-208ENST00000528768 MINPP1Q9UNW1 487 aa13.66□□□□□ -0.22
USF1-208ENST00000528768 RANBP2P49792 3224 aaKnown RBP13.66□□□□□ -0.22
USF1-208ENST00000528768 LAMA4Q16363 1823 aa13.65□□□□□ -0.22
USF1-208ENST00000528768 ERICH2A1L162 156 aa13.65□□□□□ -0.22
USF1-208ENST00000528768 ESPNB1AK53 854 aa13.65□□□□□ -0.22
USF1-208ENST00000528768 MBD4O95243 580 aa13.65□□□□□ -0.22
USF1-208ENST00000528768 CAPN2P17655 700 aa13.65□□□□□ -0.22
USF1-208ENST00000528768 TDO2P48775 406 aa13.65□□□□□ -0.22
USF1-208ENST00000528768 BCAMP50895 628 aa13.65□□□□□ -0.22
USF1-208ENST00000528768 NFXL1Q6ZNB6 911 aa13.65□□□□□ -0.22
USF1-208ENST00000528768 TTC6Q86TZ1 520 aa13.65□□□□□ -0.22
USF1-208ENST00000528768 IFNL3Q8IZI9 196 aa13.65□□□□□ -0.22
USF1-208ENST00000528768 TMTC2Q8N394 836 aa13.65□□□□□ -0.22
USF1-208ENST00000528768 BICD2Q8TD16 824 aa13.65□□□□□ -0.22
USF1-208ENST00000528768 C8orf76Q96K31 380 aa13.65□□□□□ -0.22
USF1-208ENST00000528768 PTPN18Q99952 460 aa13.65□□□□□ -0.22
USF1-208ENST00000528768 MXD3Q9BW11 206 aa13.65□□□□□ -0.22
USF1-208ENST00000528768 CCDC39Q9UFE4 941 aa13.65□□□□□ -0.22
USF1-208ENST00000528768 CTAGE5O15320 804 aa13.64□□□□□ -0.23
USF1-208ENST00000528768 FOXP2O15409 715 aa13.64□□□□□ -0.23
USF1-208ENST00000528768 CYP7A1P22680 504 aa13.64□□□□□ -0.23
USF1-208ENST00000528768 GTF2A2P52657 109 aa13.64□□□□□ -0.23
USF1-208ENST00000528768 COL9A3Q14050 684 aaPredicted RBP13.64□□□□□ -0.23
USF1-208ENST00000528768 TAF1CQ15572 869 aaPredicted RBP13.64□□□□□ -0.23
USF1-208ENST00000528768 MFSD6Q6ZSS7 791 aa13.64□□□□□ -0.23
USF1-208ENST00000528768 CHST3Q7LGC8 479 aa13.64□□□□□ -0.23
USF1-208ENST00000528768 BRAPQ7Z569 592 aa13.64□□□□□ -0.23
USF1-208ENST00000528768 WASF1Q92558 559 aa13.64□□□□□ -0.23
USF1-208ENST00000528768 ZCCHC17Q9NP64 241 aaKnown RBP13.64□□□□□ -0.23
USF1-208ENST00000528768 RTN4Q9NQC3 1192 aaKnown RBP13.64□□□□□ -0.23
USF1-208ENST00000528768 RAI14Q9P0K7 980 aa13.64□□□□□ -0.23
USF1-208ENST00000528768 ORC3Q9UBD5 711 aaPredicted RBP13.64□□□□□ -0.23
USF1-208ENST00000528768 SLC4A4Q9Y6R1 1079 aa13.64□□□□□ -0.23
USF1-208ENST00000528768 PDS5AQ29RF7 1337 aaKnown RBP13.64□□□□□ -0.23
USF1-208ENST00000528768 SALL1Q9NSC2 1324 aa13.64□□□□□ -0.23
USF1-208ENST00000528768 SSC5DA1L4H1 1573 aa13.63□□□□□ -0.23
USF1-208ENST00000528768 ZNF646O15015 1829 aaPredicted RBP13.63□□□□□ -0.23
USF1-208ENST00000528768 MAGEB6P1A0A0J9YX57 407 aa13.63□□□□□ -0.23
USF1-208ENST00000528768 CCDC69A6NI79 296 aa13.63□□□□□ -0.23
USF1-208ENST00000528768 SH2B2O14492 632 aaPredicted RBP13.63□□□□□ -0.23
USF1-208ENST00000528768 ZBTB22O15209 634 aa13.63□□□□□ -0.23
USF1-208ENST00000528768 CTDNEP1O95476 244 aa13.63□□□□□ -0.23
USF1-208ENST00000528768 CAVIN2O95810 425 aa13.63□□□□□ -0.23
USF1-208ENST00000528768 MSNP26038 577 aaKnown RBP13.63□□□□□ -0.23
USF1-208ENST00000528768 METAP2P50579 478 aaKnown RBP eCLIP13.63□□□□□ -0.23
USF1-208ENST00000528768 TNFAIP1Q13829 316 aa13.63□□□□□ -0.23
USF1-208ENST00000528768 TRIM29Q14134 588 aa13.63□□□□□ -0.23
USF1-208ENST00000528768 AKNAD1Q5T1N1 836 aa13.63□□□□□ -0.23
USF1-208ENST00000528768 TNMDQ9H2S6 317 aa13.63□□□□□ -0.23
USF1-208ENST00000528768 PRO3102Q9H379 93 aa13.63□□□□□ -0.23
USF1-208ENST00000528768 TFIP11Q9UBB9 837 aaKnown RBP13.63□□□□□ -0.23
USF1-208ENST00000528768 RCOR1Q9UKL0 485 aa13.63□□□□□ -0.23
USF1-208ENST00000528768 CCDC196A0A1B0GTZ2 297 aa13.62□□□□□ -0.23
USF1-208ENST00000528768 ZBTB43O43298 467 aa13.62□□□□□ -0.23
USF1-208ENST00000528768 USP2O75604 605 aaPredicted RBP13.62□□□□□ -0.23
USF1-208ENST00000528768 PCP11498 1178 aaKnown RBP13.62□□□□□ -0.23
USF1-208ENST00000528768 CLCN1P35523 988 aa13.62□□□□□ -0.23
USF1-208ENST00000528768 GJA5P36382 358 aa13.62□□□□□ -0.23
USF1-208ENST00000528768 LIFRP42702 1097 aa13.62□□□□□ -0.23
USF1-208ENST00000528768 TMEM67Q5HYA8 995 aa13.62□□□□□ -0.23
USF1-208ENST00000528768 SPTY2D1Q68D10 685 aaPredicted RBP13.62□□□□□ -0.23
USF1-208ENST00000528768 CCDC73Q6ZRK6 1079 aa13.62□□□□□ -0.23
USF1-208ENST00000528768 ZSCAN30Q86W11 494 aa13.62□□□□□ -0.23
USF1-208ENST00000528768 MS4A4AQ96JQ5 239 aa13.62□□□□□ -0.23
USF1-208ENST00000528768 PDLIM2Q96JY6 352 aa13.62□□□□□ -0.23
USF1-208ENST00000528768 ARMT1Q9H993 441 aa13.62□□□□□ -0.23
USF1-208ENST00000528768 NCOA5Q9HCD5 579 aaKnown RBP13.62□□□□□ -0.23
USF1-208ENST00000528768 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.62□□□□□ -0.23
USF1-208ENST00000528768 FZD1Q9UP38 647 aa13.62□□□□□ -0.23
USF1-208ENST00000528768 TCHHQ07283 1943 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 IFIT3O14879 490 aaKnown RBP13.61□□□□□ -0.23
USF1-208ENST00000528768 PTMAP06454 111 aaKnown RBP13.61□□□□□ -0.23
USF1-208ENST00000528768 NT5C2P49902 561 aa13.61□□□□□ -0.23
USF1-208ENST00000528768 RCAN1P53805 252 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms