RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 ZNF804BA4D1E1 1349 aa21.51■■□□□ 1.03
TM9SF1-206ENST00000528669 PLCD1P51178 756 aa21.51■■□□□ 1.03
TM9SF1-206ENST00000528669 STX17P56962 302 aa21.51■■□□□ 1.03
TM9SF1-206ENST00000528669 FUT2Q10981 343 aa21.51■■□□□ 1.03
TM9SF1-206ENST00000528669 ARHGAP29Q52LW3 1261 aa21.51■■□□□ 1.03
TM9SF1-206ENST00000528669 CATIPQ7Z7H3 387 aa21.51■■□□□ 1.03
TM9SF1-206ENST00000528669 NUTM2AQ8IVF1 878 aaPredicted RBP21.51■■□□□ 1.03
TM9SF1-206ENST00000528669 CDC5LQ99459 802 aaKnown RBP21.51■■□□□ 1.03
TM9SF1-206ENST00000528669 FCHSD1Q86WN1 690 aa21.5■■□□□ 1.03
TM9SF1-206ENST00000528669 KRT222Q8N1A0 295 aa21.5■■□□□ 1.03
TM9SF1-206ENST00000528669 SPATA20Q8TB22 786 aa21.5■■□□□ 1.03
TM9SF1-206ENST00000528669 SYMPKQ92797 1274 aaKnown RBP21.5■■□□□ 1.03
TM9SF1-206ENST00000528669 AATFQ9NY61 560 aaKnown RBP eCLIP21.5■■□□□ 1.03
TM9SF1-206ENST00000528669 H2AFXP16104 143 aaPredicted RBP21.5■■□□□ 1.03
TM9SF1-206ENST00000528669 ZNF174Q15697 407 aa21.5■■□□□ 1.03
TM9SF1-206ENST00000528669 DDB1Q16531 1140 aa21.5■■□□□ 1.03
TM9SF1-206ENST00000528669 ERFEQ4G0M1 354 aa21.5■■□□□ 1.03
TM9SF1-206ENST00000528669 ANKRD18AQ8IVF6 992 aa21.5■■□□□ 1.03
TM9SF1-206ENST00000528669 ZNF384Q8TF68 577 aa21.5■■□□□ 1.03
TM9SF1-206ENST00000528669 GNL3LQ9NVN8 582 aaKnown RBP21.5■■□□□ 1.03
TM9SF1-206ENST00000528669 CACNA1SQ13698 1873 aa21.49■■□□□ 1.03
TM9SF1-206ENST00000528669 CD44P16070 742 aaKnown RBP21.49■■□□□ 1.03
TM9SF1-206ENST00000528669 PARP3Q9Y6F1 533 aa21.49■■□□□ 1.03
TM9SF1-206ENST00000528669 DUOX1Q9NRD9 1551 aa21.49■■□□□ 1.03
TM9SF1-206ENST00000528669 PRPF3O43395 683 aaKnown RBP21.49■■□□□ 1.03
TM9SF1-206ENST00000528669 SMYD4Q8IYR2 804 aaPredicted RBP21.49■■□□□ 1.03
TM9SF1-206ENST00000528669 PAGE5Q96GU1 130 aa21.49■■□□□ 1.03
TM9SF1-206ENST00000528669 DESI2Q9BSY9 194 aa21.49■■□□□ 1.03
TM9SF1-206ENST00000528669 CARD6Q9BX69 1037 aa21.49■■□□□ 1.03
TM9SF1-206ENST00000528669 TEX33O43247 280 aa21.48■■□□□ 1.03
TM9SF1-206ENST00000528669 NR1I3Q14994 352 aa21.48■■□□□ 1.03
TM9SF1-206ENST00000528669 MNS1Q8NEH6 495 aa21.48■■□□□ 1.03
TM9SF1-206ENST00000528669 STX10O60499 249 aa21.48■■□□□ 1.03
TM9SF1-206ENST00000528669 NMT2O60551 498 aa21.48■■□□□ 1.03
TM9SF1-206ENST00000528669 CLCN6P51797 869 aa21.48■■□□□ 1.03
TM9SF1-206ENST00000528669 TROAPQ12815 778 aa21.48■■□□□ 1.03
TM9SF1-206ENST00000528669 PPP2R5BQ15173 497 aa21.48■■□□□ 1.03
TM9SF1-206ENST00000528669 IQCA1Q86XH1 822 aa21.48■■□□□ 1.03
TM9SF1-206ENST00000528669 STAMQ92783 540 aa21.48■■□□□ 1.03
TM9SF1-206ENST00000528669 WDR24Q96S15 920 aa21.48■■□□□ 1.03
TM9SF1-206ENST00000528669 USP17L12C9JPN9 530 aa21.47■■□□□ 1.03
TM9SF1-206ENST00000528669 USP17L21D6R901 530 aa21.47■■□□□ 1.03
TM9SF1-206ENST00000528669 GNG11P61952 73 aa21.47■■□□□ 1.03
TM9SF1-206ENST00000528669 CAVIN4Q5BKX8 364 aa21.47■■□□□ 1.03
TM9SF1-206ENST00000528669 CTR9Q6PD62 1173 aa21.47■■□□□ 1.03
TM9SF1-206ENST00000528669 UBXN4Q92575 508 aa21.47■■□□□ 1.03
TM9SF1-206ENST00000528669 WNK3Q9BYP7 1800 aa21.47■■□□□ 1.03
TM9SF1-206ENST00000528669 SLFN14P0C7P3 912 aa21.47■■□□□ 1.03
TM9SF1-206ENST00000528669 ERCC5P28715 1186 aaPredicted RBP21.47■■□□□ 1.03
TM9SF1-206ENST00000528669 MTF1Q14872 753 aa21.47■■□□□ 1.03
TM9SF1-206ENST00000528669 MARCH10Q8NA82 808 aaPredicted RBP21.47■■□□□ 1.03
TM9SF1-206ENST00000528669 FAM53CQ9NYF3 392 aa21.47■■□□□ 1.03
TM9SF1-206ENST00000528669 LAMB2P55268 1798 aa21.47■■□□□ 1.03
TM9SF1-206ENST00000528669 COL16A1Q07092 1604 aaPredicted RBP21.46■■□□□ 1.03
TM9SF1-206ENST00000528669 COBLO75128 1261 aa21.46■■□□□ 1.03
TM9SF1-206ENST00000528669 BICDL1Q6ZP65 573 aa21.46■■□□□ 1.03
TM9SF1-206ENST00000528669 FAM84BQ96KN1 310 aaPredicted RBP21.46■■□□□ 1.03
TM9SF1-206ENST00000528669 ST7Q9NRC1 585 aa21.46■■□□□ 1.03
TM9SF1-206ENST00000528669 A0A1B0GTH6 734 aa21.46■■□□□ 1.03
TM9SF1-206ENST00000528669 ADAMTS2O95450 1211 aa21.46■■□□□ 1.03
TM9SF1-206ENST00000528669 KLRK1P26718 216 aa21.46■■□□□ 1.03
TM9SF1-206ENST00000528669 UBE4AQ14139 1066 aa21.46■■□□□ 1.03
TM9SF1-206ENST00000528669 NPY5RQ15761 445 aa21.46■■□□□ 1.03
TM9SF1-206ENST00000528669 SH3RF1Q7Z6J0 888 aa21.46■■□□□ 1.03
TM9SF1-206ENST00000528669 NOL10Q9BSC4 688 aaKnown RBP21.46■■□□□ 1.03
TM9SF1-206ENST00000528669 BRIP1Q9BX63 1249 aa21.46■■□□□ 1.03
TM9SF1-206ENST00000528669 RBM28Q9NW13 759 aaKnown RBP21.46■■□□□ 1.03
TM9SF1-206ENST00000528669 MINPP1Q9UNW1 487 aa21.46■■□□□ 1.03
TM9SF1-206ENST00000528669 SYNRGQ9UMZ2 1314 aa21.46■■□□□ 1.03
TM9SF1-206ENST00000528669 CASQ1P31415 396 aa21.45■■□□□ 1.02
TM9SF1-206ENST00000528669 KARSQ15046 597 aaKnown RBP21.45■■□□□ 1.02
TM9SF1-206ENST00000528669 FAM47AQ5JRC9 791 aa21.45■■□□□ 1.02
TM9SF1-206ENST00000528669 TTC38Q5R3I4 469 aa21.45■■□□□ 1.02
TM9SF1-206ENST00000528669 CPLX3Q8WVH0 158 aa21.45■■□□□ 1.02
TM9SF1-206ENST00000528669 CELF1Q92879 486 aaKnown RBP21.45■■□□□ 1.02
TM9SF1-206ENST00000528669 MYH13Q9UKX3 1938 aa21.45■■□□□ 1.02
TM9SF1-206ENST00000528669 TADA3O75528 432 aa21.45■■□□□ 1.02
TM9SF1-206ENST00000528669 GABPB1Q06547 395 aaPredicted RBP21.45■■□□□ 1.02
TM9SF1-206ENST00000528669 SPATA1Q5VX52 437 aa21.45■■□□□ 1.02
TM9SF1-206ENST00000528669 TMTC3Q6ZXV5 915 aa21.45■■□□□ 1.02
TM9SF1-206ENST00000528669 SMIM5Q71RC9 77 aa21.45■■□□□ 1.02
TM9SF1-206ENST00000528669 APTXQ7Z2E3 356 aaKnown RBP21.45■■□□□ 1.02
TM9SF1-206ENST00000528669 SRBD1Q8N5C6 995 aaKnown RBP21.45■■□□□ 1.02
TM9SF1-206ENST00000528669 CCDC34Q96HJ3 373 aa21.45■■□□□ 1.02
TM9SF1-206ENST00000528669 EPC1Q9H2F5 836 aa21.45■■□□□ 1.02
TM9SF1-206ENST00000528669 BRMS1Q9HCU9 246 aa21.45■■□□□ 1.02
TM9SF1-206ENST00000528669 SOWAHDA6NJG2 315 aa21.44■■□□□ 1.02
TM9SF1-206ENST00000528669 DPYDQ12882 1025 aa21.44■■□□□ 1.02
TM9SF1-206ENST00000528669 PTGDRQ13258 359 aa21.44■■□□□ 1.02
TM9SF1-206ENST00000528669 CUL4BQ13620 913 aa21.44■■□□□ 1.02
TM9SF1-206ENST00000528669 ZNF771Q7L3S4 317 aaPredicted RBP21.44■■□□□ 1.02
TM9SF1-206ENST00000528669 TNFRSF25Q93038 417 aa21.44■■□□□ 1.02
TM9SF1-206ENST00000528669 BSDC1Q9NW68 430 aaPredicted RBP21.44■■□□□ 1.02
TM9SF1-206ENST00000528669 ZNF652Q9Y2D9 606 aa21.44■■□□□ 1.02
TM9SF1-206ENST00000528669 CNTNAP5Q8WYK1 1306 aa21.44■■□□□ 1.02
TM9SF1-206ENST00000528669 ADAMTS3O15072 1205 aa21.44■■□□□ 1.02
TM9SF1-206ENST00000528669 VEGFAP15692 232 aaPredicted RBP21.44■■□□□ 1.02
TM9SF1-206ENST00000528669 SLC4A8Q2Y0W8 1093 aa21.44■■□□□ 1.02
TM9SF1-206ENST00000528669 FERMT2Q96AC1 680 aa21.44■■□□□ 1.02
TM9SF1-206ENST00000528669 A0A1B0GUL6 1792 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms