RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 PTF1AQ7RTS3 328 aa11.13□□□□□ -0.63
COMMD9-205ENST00000528608 KLHDC7BQ96G42 594 aa11.13□□□□□ -0.63
COMMD9-205ENST00000528608 HHIPQ96QV1 700 aa11.13□□□□□ -0.63
COMMD9-205ENST00000528608 FOXD3Q9UJU5 478 aaPredicted RBP11.13□□□□□ -0.63
COMMD9-205ENST00000528608 TNS2Q63HR2 1409 aa11.12□□□□□ -0.63
COMMD9-205ENST00000528608 TM4SF5O14894 197 aa11.12□□□□□ -0.63
COMMD9-205ENST00000528608 DDX3YO15523 660 aaKnown RBP11.12□□□□□ -0.63
COMMD9-205ENST00000528608 FZD6O60353 706 aa11.12□□□□□ -0.63
COMMD9-205ENST00000528608 TRIM37O94972 964 aa11.12□□□□□ -0.63
COMMD9-205ENST00000528608 UBASH3BQ8TF42 649 aa11.12□□□□□ -0.63
COMMD9-205ENST00000528608 FOXD4L4Q8WXT5 416 aaPredicted RBP11.12□□□□□ -0.63
COMMD9-205ENST00000528608 SLC7A3Q8WY07 619 aa11.12□□□□□ -0.63
COMMD9-205ENST00000528608 WNT8BQ93098 351 aa11.12□□□□□ -0.63
COMMD9-205ENST00000528608 OSMRQ99650 979 aa11.12□□□□□ -0.63
COMMD9-205ENST00000528608 ADAM11O75078 769 aa11.11□□□□□ -0.63
COMMD9-205ENST00000528608 EDN3P14138 238 aa11.11□□□□□ -0.63
COMMD9-205ENST00000528608 FSTP19883 344 aa11.11□□□□□ -0.63
COMMD9-205ENST00000528608 PPP2R1AP30153 589 aa11.11□□□□□ -0.63
COMMD9-205ENST00000528608 DEFB132Q7Z7B7 95 aa11.11□□□□□ -0.63
COMMD9-205ENST00000528608 TMEM102Q8N9M5 508 aaPredicted RBP11.11□□□□□ -0.63
COMMD9-205ENST00000528608 UBL7Q96S82 380 aaPredicted RBP11.11□□□□□ -0.63
COMMD9-205ENST00000528608 SHANK3Q9BYB0 1731 aa11.11□□□□□ -0.63
COMMD9-205ENST00000528608 IGSF1Q8N6C5 1336 aa11.1□□□□□ -0.63
COMMD9-205ENST00000528608 OVOS2A0A0G2JMS6 1433 aa11.1□□□□□ -0.63
COMMD9-205ENST00000528608 SBF2Q86WG5 1849 aa11.1□□□□□ -0.63
COMMD9-205ENST00000528608 KIAA1211Q6ZU35 1233 aa11.1□□□□□ -0.63
COMMD9-205ENST00000528608 NBPF11Q86T75 865 aa11.1□□□□□ -0.63
COMMD9-205ENST00000528608 AEBP1Q8IUX7 1158 aa11.1□□□□□ -0.63
COMMD9-205ENST00000528608 ZCRB1Q8TBF4 217 aaKnown RBP11.1□□□□□ -0.63
COMMD9-205ENST00000528608 DDX54Q8TDD1 881 aaKnown RBP11.1□□□□□ -0.63
COMMD9-205ENST00000528608 RAPGEF4Q8WZA2 1011 aa11.1□□□□□ -0.63
COMMD9-205ENST00000528608 ZKSCAN3Q9BRR0 538 aa11.1□□□□□ -0.63
COMMD9-205ENST00000528608 OSGEPQ9NPF4 335 aa11.1□□□□□ -0.63
COMMD9-205ENST00000528608 CCDC87Q9NVE4 849 aa11.1□□□□□ -0.63
COMMD9-205ENST00000528608 RAXQ9Y2V3 346 aa11.1□□□□□ -0.63
COMMD9-205ENST00000528608 COL3A1P02461 1466 aaPredicted RBP11.1□□□□□ -0.63
COMMD9-205ENST00000528608 PARD3Q8TEW0 1356 aa11.09□□□□□ -0.63
COMMD9-205ENST00000528608 ARL4DP49703 201 aa11.09□□□□□ -0.63
COMMD9-205ENST00000528608 NLRP12P59046 1061 aa11.09□□□□□ -0.63
COMMD9-205ENST00000528608 RNF112Q9ULX5 631 aa11.09□□□□□ -0.63
COMMD9-205ENST00000528608 SOX13Q9UN79 622 aa11.09□□□□□ -0.63
COMMD9-205ENST00000528608 RGPD1P0DJD0 1748 aa11.09□□□□□ -0.63
COMMD9-205ENST00000528608 TNS1Q9HBL0 1735 aaKnown RBP11.09□□□□□ -0.63
COMMD9-205ENST00000528608 DHX15O43143 795 aaKnown RBP11.08□□□□□ -0.64
COMMD9-205ENST00000528608 KCNQ2O43526 872 aa11.08□□□□□ -0.64
COMMD9-205ENST00000528608 UVSSAQ2YD98 709 aa11.08□□□□□ -0.64
COMMD9-205ENST00000528608 GJD3Q8N144 294 aa11.08□□□□□ -0.64
COMMD9-205ENST00000528608 BSNDQ8WZ55 320 aa11.08□□□□□ -0.64
COMMD9-205ENST00000528608 UTP4Q969X6 686 aaKnown RBP11.08□□□□□ -0.64
COMMD9-205ENST00000528608 NXPE3Q969Y0 559 aa11.08□□□□□ -0.64
COMMD9-205ENST00000528608 ACSBG1Q96GR2 724 aa11.08□□□□□ -0.64
COMMD9-205ENST00000528608 BCL9O00512 1426 aa11.08□□□□□ -0.64
COMMD9-205ENST00000528608 CYP27B1O15528 508 aa11.07□□□□□ -0.64
COMMD9-205ENST00000528608 DIAPH1O60610 1272 aaKnown RBP11.07□□□□□ -0.64
COMMD9-205ENST00000528608 SULT6B1Q6IMI4 303 aa11.07□□□□□ -0.64
COMMD9-205ENST00000528608 STOML1Q9UBI4 398 aa11.07□□□□□ -0.64
COMMD9-205ENST00000528608 EGFL7Q9UHF1 273 aa11.07□□□□□ -0.64
COMMD9-205ENST00000528608 KAT6BQ8WYB5 2073 aa11.07□□□□□ -0.64
COMMD9-205ENST00000528608 H3BRB1 525 aa11.06□□□□□ -0.64
COMMD9-205ENST00000528608 HMOX1P09601 288 aa11.06□□□□□ -0.64
COMMD9-205ENST00000528608 C19orf57Q0VDD7 668 aa11.06□□□□□ -0.64
COMMD9-205ENST00000528608 SLC51AQ86UW1 340 aa11.06□□□□□ -0.64
COMMD9-205ENST00000528608 ARMC10Q8N2F6 343 aa11.06□□□□□ -0.64
COMMD9-205ENST00000528608 ASAP3Q8TDY4 903 aa11.06□□□□□ -0.64
COMMD9-205ENST00000528608 ARID3AQ99856 593 aa11.06□□□□□ -0.64
COMMD9-205ENST00000528608 TUT1Q9H6E5 874 aaKnown RBP11.06□□□□□ -0.64
COMMD9-205ENST00000528608 PKD1L3Q7Z443 1732 aa11.06□□□□□ -0.64
COMMD9-205ENST00000528608 KDRP35968 1356 aa11.05□□□□□ -0.64
COMMD9-205ENST00000528608 GSC2O15499 205 aa11.05□□□□□ -0.64
COMMD9-205ENST00000528608 HYAL3O43820 417 aaPredicted RBP11.05□□□□□ -0.64
COMMD9-205ENST00000528608 ICMTO60725 284 aa11.05□□□□□ -0.64
COMMD9-205ENST00000528608 IKBKEQ14164 716 aa11.05□□□□□ -0.64
COMMD9-205ENST00000528608 EZH2Q15910 746 aaKnown RBP11.05□□□□□ -0.64
COMMD9-205ENST00000528608 GLYCTKQ8IVS8 523 aa11.05□□□□□ -0.64
COMMD9-205ENST00000528608 CAMKK2Q96RR4 588 aa11.05□□□□□ -0.64
COMMD9-205ENST00000528608 LATS2Q9NRM7 1088 aa11.05□□□□□ -0.64
COMMD9-205ENST00000528608 SART1O43290 800 aaKnown RBP11.04□□□□□ -0.64
COMMD9-205ENST00000528608 SERPINB4P48594 390 aa11.04□□□□□ -0.64
COMMD9-205ENST00000528608 RALBP1Q15311 655 aa11.04□□□□□ -0.64
COMMD9-205ENST00000528608 FAM46AQ96IP4 442 aaKnown RBP11.04□□□□□ -0.64
COMMD9-205ENST00000528608 RUSC1Q9BVN2 902 aa11.04□□□□□ -0.64
COMMD9-205ENST00000528608 RNF208Q9H0X6 261 aa11.04□□□□□ -0.64
COMMD9-205ENST00000528608 ZFYVE28Q9HCC9 887 aa11.04□□□□□ -0.64
COMMD9-205ENST00000528608 U2SURPO15042 1029 aaKnown RBP11.03□□□□□ -0.64
COMMD9-205ENST00000528608 ANKRD34AQ69YU3 496 aa11.03□□□□□ -0.64
COMMD9-205ENST00000528608 CFAP53Q96M91 514 aa11.03□□□□□ -0.64
COMMD9-205ENST00000528608 BHLHE41Q9C0J9 482 aaPredicted RBP11.03□□□□□ -0.64
COMMD9-205ENST00000528608 BRPF3Q9ULD4 1205 aa11.03□□□□□ -0.64
COMMD9-205ENST00000528608 SPG7Q9UQ90 795 aa11.03□□□□□ -0.64
COMMD9-205ENST00000528608 NHSQ6T4R5 1651 aa11.03□□□□□ -0.64
COMMD9-205ENST00000528608 DOT1LQ8TEK3 1739 aa11.03□□□□□ -0.64
COMMD9-205ENST00000528608 PCDH11XQ9BZA7 1347 aa11.03□□□□□ -0.64
COMMD9-205ENST00000528608 PCDH11YQ9BZA8 1340 aa11.03□□□□□ -0.64
COMMD9-205ENST00000528608 TOGARAM1Q9Y4F4 1720 aa11.02□□□□□ -0.65
COMMD9-205ENST00000528608 IGLV1-40P01703 118 aa11.02□□□□□ -0.65
COMMD9-205ENST00000528608 POLR3DP05423 398 aaPredicted RBP11.02□□□□□ -0.65
COMMD9-205ENST00000528608 PHKG2P15735 406 aa11.02□□□□□ -0.65
COMMD9-205ENST00000528608 PEAR1Q5VY43 1037 aaPredicted RBP11.02□□□□□ -0.65
COMMD9-205ENST00000528608 HGSNATQ68CP4 663 aa11.02□□□□□ -0.65
COMMD9-205ENST00000528608 FDX2Q6P4F2 183 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms