RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 VPS53Q5VIR6 699 aa20.11■□□□□ 0.81
HIF3A-211ENST00000528563 OTOP1Q7RTM1 612 aa20.11■□□□□ 0.81
HIF3A-211ENST00000528563 ROBO3Q96MS0 1386 aa20.1■□□□□ 0.81
HIF3A-211ENST00000528563 LOC285556D6RIA3 1793 aa20.1■□□□□ 0.81
HIF3A-211ENST00000528563 LACTBP83111 547 aaPredicted RBP20.1■□□□□ 0.81
HIF3A-211ENST00000528563 PABPC4Q13310 644 aaKnown RBP eCLIP20.1■□□□□ 0.81
HIF3A-211ENST00000528563 TTC22Q5TAA0 569 aa20.1■□□□□ 0.81
HIF3A-211ENST00000528563 C12orf42Q96LP6 360 aa20.1■□□□□ 0.81
HIF3A-211ENST00000528563 NAPBQ9H115 298 aa20.1■□□□□ 0.81
HIF3A-211ENST00000528563 ASCC2Q9H1I8 757 aaPredicted RBP20.1■□□□□ 0.81
HIF3A-211ENST00000528563 PNMA3Q9UL41 463 aa20.1■□□□□ 0.81
HIF3A-211ENST00000528563 A0A1W2PRG0 241 aa20.09■□□□□ 0.81
HIF3A-211ENST00000528563 GSPT1P15170 499 aaKnown RBP20.09■□□□□ 0.81
HIF3A-211ENST00000528563 RASA1P20936 1047 aa20.09■□□□□ 0.81
HIF3A-211ENST00000528563 EFCC1Q9HA90 598 aa20.09■□□□□ 0.81
HIF3A-211ENST00000528563 TRIM17Q9Y577 477 aa20.09■□□□□ 0.81
HIF3A-211ENST00000528563 OSBPP22059 807 aa20.08■□□□□ 0.81
HIF3A-211ENST00000528563 USP14P54578 494 aa20.08■□□□□ 0.81
HIF3A-211ENST00000528563 ARHGEF6Q15052 776 aa20.08■□□□□ 0.81
HIF3A-211ENST00000528563 FBXO46Q6PJ61 603 aaPredicted RBP20.08■□□□□ 0.81
HIF3A-211ENST00000528563 ZNF589Q86UQ0 364 aaPredicted RBP20.08■□□□□ 0.81
HIF3A-211ENST00000528563 STK11IPQ8N1F8 1099 aa20.08■□□□□ 0.81
HIF3A-211ENST00000528563 FEZ1Q99689 392 aa20.08■□□□□ 0.81
HIF3A-211ENST00000528563 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.08■□□□□ 0.81
HIF3A-211ENST00000528563 MKNK2Q9HBH9 465 aa20.08■□□□□ 0.81
HIF3A-211ENST00000528563 HIP1O00291 1037 aa20.07■□□□□ 0.8
HIF3A-211ENST00000528563 PPARAQ07869 468 aa20.07■□□□□ 0.8
HIF3A-211ENST00000528563 KIF22Q14807 665 aa20.07■□□□□ 0.8
HIF3A-211ENST00000528563 ZYXQ15942 572 aaKnown RBP20.07■□□□□ 0.8
HIF3A-211ENST00000528563 CENPQQ7L2Z9 268 aaPredicted RBP20.07■□□□□ 0.8
HIF3A-211ENST00000528563 SMCR8Q8TEV9 937 aaPredicted RBP20.07■□□□□ 0.8
HIF3A-211ENST00000528563 P2RX7Q99572 595 aaKnown RBP20.07■□□□□ 0.8
HIF3A-211ENST00000528563 ARHGAP39Q9C0H5 1083 aa20.07■□□□□ 0.8
HIF3A-211ENST00000528563 KANSL2Q9H9L4 492 aa20.07■□□□□ 0.8
HIF3A-211ENST00000528563 FGAP02671 866 aa20.06■□□□□ 0.8
HIF3A-211ENST00000528563 HSPD1P10809 573 aaKnown RBP20.06■□□□□ 0.8
HIF3A-211ENST00000528563 CTGFP29279 349 aa20.06■□□□□ 0.8
HIF3A-211ENST00000528563 GCLCP48506 637 aaPredicted RBP20.06■□□□□ 0.8
HIF3A-211ENST00000528563 ZNF287Q9HBT7 754 aa20.06■□□□□ 0.8
HIF3A-211ENST00000528563 DIAPH3Q9NSV4 1193 aa20.06■□□□□ 0.8
HIF3A-211ENST00000528563 TMX2Q9Y320 296 aa20.06■□□□□ 0.8
HIF3A-211ENST00000528563 CCDC171Q6TFL3 1326 aa20.06■□□□□ 0.8
HIF3A-211ENST00000528563 MYH8P13535 1937 aa20.06■□□□□ 0.8
HIF3A-211ENST00000528563 CWC27Q6UX04 472 aaKnown RBP20.05■□□□□ 0.8
HIF3A-211ENST00000528563 CLEC10AQ8IUN9 316 aa20.05■□□□□ 0.8
HIF3A-211ENST00000528563 ANAPC4Q9UJX5 808 aa20.05■□□□□ 0.8
HIF3A-211ENST00000528563 PTPN22Q9Y2R2 807 aa20.05■□□□□ 0.8
HIF3A-211ENST00000528563 PRDM1O75626 825 aa20.05■□□□□ 0.8
HIF3A-211ENST00000528563 GNRH1P01148 92 aa20.05■□□□□ 0.8
HIF3A-211ENST00000528563 SLC3A2P08195 630 aaKnown RBP20.05■□□□□ 0.8
HIF3A-211ENST00000528563 VCAM1P19320 739 aa20.05■□□□□ 0.8
HIF3A-211ENST00000528563 PSMC4P43686 418 aa20.05■□□□□ 0.8
HIF3A-211ENST00000528563 MFAP1P55081 439 aaKnown RBP20.05■□□□□ 0.8
HIF3A-211ENST00000528563 IRX3P78415 501 aaPredicted RBP20.05■□□□□ 0.8
HIF3A-211ENST00000528563 ICA1Q05084 483 aa20.05■□□□□ 0.8
HIF3A-211ENST00000528563 ZNF444Q8N0Y2 327 aaPredicted RBP20.05■□□□□ 0.8
HIF3A-211ENST00000528563 ANKRD13CQ8N6S4 541 aa20.05■□□□□ 0.8
HIF3A-211ENST00000528563 TRIM47Q96LD4 638 aa20.05■□□□□ 0.8
HIF3A-211ENST00000528563 HPS5Q9UPZ3 1129 aa20.05■□□□□ 0.8
HIF3A-211ENST00000528563 USP17L15C9J2P7 530 aa20.04■□□□□ 0.8
HIF3A-211ENST00000528563 USP17L13C9JLJ4 530 aa20.04■□□□□ 0.8
HIF3A-211ENST00000528563 USP17L11C9JVI0 530 aa20.04■□□□□ 0.8
HIF3A-211ENST00000528563 USP17L18D6R9N7 530 aa20.04■□□□□ 0.8
HIF3A-211ENST00000528563 USP17L22D6RA61 530 aa20.04■□□□□ 0.8
HIF3A-211ENST00000528563 USP17L17D6RBQ6 530 aa20.04■□□□□ 0.8
HIF3A-211ENST00000528563 USP17L19D6RCP7 530 aa20.04■□□□□ 0.8
HIF3A-211ENST00000528563 USP17L20D6RJB6 530 aa20.04■□□□□ 0.8
HIF3A-211ENST00000528563 EEF2P13639 858 aaKnown RBP20.04■□□□□ 0.8
HIF3A-211ENST00000528563 PDE4BQ07343 736 aa20.04■□□□□ 0.8
HIF3A-211ENST00000528563 USP17L24Q0WX57 530 aa20.04■□□□□ 0.8
HIF3A-211ENST00000528563 KIAA1755Q5JYT7 1200 aa20.04■□□□□ 0.8
HIF3A-211ENST00000528563 CATSPERGQ6ZRH7 1159 aa20.04■□□□□ 0.8
HIF3A-211ENST00000528563 ARHGEF10LQ9HCE6 1279 aa20.04■□□□□ 0.8
HIF3A-211ENST00000528563 CAPN15O75808 1086 aa20.03■□□□□ 0.8
HIF3A-211ENST00000528563 CTDSPL2Q05D32 466 aa20.03■□□□□ 0.8
HIF3A-211ENST00000528563 FAM110CQ1W6H9 321 aa20.03■□□□□ 0.8
HIF3A-211ENST00000528563 POTEEQ6S8J3 1075 aa20.03■□□□□ 0.8
HIF3A-211ENST00000528563 INCENPQ9NQS7 918 aa20.03■□□□□ 0.8
HIF3A-211ENST00000528563 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.03■□□□□ 0.8
HIF3A-211ENST00000528563 TACC3Q9Y6A5 838 aa20.03■□□□□ 0.8
HIF3A-211ENST00000528563 ZMYM6O95789 1325 aa20.02■□□□□ 0.8
HIF3A-211ENST00000528563 IGKV6D-41A0A0C4DH26 115 aa20.02■□□□□ 0.8
HIF3A-211ENST00000528563 FGRP09769 529 aa20.02■□□□□ 0.8
HIF3A-211ENST00000528563 HERVK_113P62684 666 aa20.02■□□□□ 0.8
HIF3A-211ENST00000528563 SH2D4AQ9H788 454 aa20.02■□□□□ 0.8
HIF3A-211ENST00000528563 NYAP2Q9P242 653 aa20.02■□□□□ 0.8
HIF3A-211ENST00000528563 RBPJLQ9UBG7 517 aa20.02■□□□□ 0.8
HIF3A-211ENST00000528563 MORF4L1Q9UBU8 362 aa20.02■□□□□ 0.8
HIF3A-211ENST00000528563 CCDC85CA6NKD9 419 aa20.01■□□□□ 0.79
HIF3A-211ENST00000528563 FMNL1O95466 1100 aaPredicted RBP20.01■□□□□ 0.79
HIF3A-211ENST00000528563 NEDD1Q8NHV4 660 aa20.01■□□□□ 0.79
HIF3A-211ENST00000528563 LPAR1Q92633 364 aa20.01■□□□□ 0.79
HIF3A-211ENST00000528563 RPAP3Q9H6T3 665 aaPredicted RBP20.01■□□□□ 0.79
HIF3A-211ENST00000528563 VCPKMTQ9H867 229 aa20.01■□□□□ 0.79
HIF3A-211ENST00000528563 GREB1LQ9C091 1923 aaPredicted RBP20■□□□□ 0.79
HIF3A-211ENST00000528563 ECM2O94769 699 aaPredicted RBP20■□□□□ 0.79
HIF3A-211ENST00000528563 CHMLP26374 656 aa20■□□□□ 0.79
HIF3A-211ENST00000528563 PRMT2P55345 433 aa20■□□□□ 0.79
HIF3A-211ENST00000528563 TFAP4Q01664 338 aa20■□□□□ 0.79
HIF3A-211ENST00000528563 CCDC136Q96JN2 1154 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms