RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 CHMP4BQ9H444 224 aaKnown RBP31.34■■■□□ 2.61
TRIM3-206ENST00000528227 RPTORQ8N122 1335 aa31.33■■■□□ 2.61
TRIM3-206ENST00000528227 USP14P54578 494 aa31.33■■■□□ 2.61
TRIM3-206ENST00000528227 BCL11AQ9H165 835 aa31.33■■■□□ 2.61
TRIM3-206ENST00000528227 PORCNQ9H237 461 aa31.33■■■□□ 2.61
TRIM3-206ENST00000528227 HMX1Q9NP08 348 aaPredicted RBP31.33■■■□□ 2.61
TRIM3-206ENST00000528227 CABP5Q9NP86 173 aa31.33■■■□□ 2.61
TRIM3-206ENST00000528227 RCAN3Q9UKA8 241 aa31.33■■■□□ 2.61
TRIM3-206ENST00000528227 USP17L15C9J2P7 530 aa31.32■■■□□ 2.6
TRIM3-206ENST00000528227 USP17L13C9JLJ4 530 aa31.32■■■□□ 2.6
TRIM3-206ENST00000528227 USP17L11C9JVI0 530 aa31.32■■■□□ 2.6
TRIM3-206ENST00000528227 USP17L18D6R9N7 530 aa31.32■■■□□ 2.6
TRIM3-206ENST00000528227 USP17L22D6RA61 530 aa31.32■■■□□ 2.6
TRIM3-206ENST00000528227 USP17L17D6RBQ6 530 aa31.32■■■□□ 2.6
TRIM3-206ENST00000528227 USP17L19D6RCP7 530 aa31.32■■■□□ 2.6
TRIM3-206ENST00000528227 USP17L20D6RJB6 530 aa31.32■■■□□ 2.6
TRIM3-206ENST00000528227 USP17L24Q0WX57 530 aa31.32■■■□□ 2.6
TRIM3-206ENST00000528227 ACER1Q8TDN7 264 aa31.32■■■□□ 2.6
TRIM3-206ENST00000528227 EDC3Q96F86 508 aaKnown RBP31.32■■■□□ 2.6
TRIM3-206ENST00000528227 MCM9Q9NXL9 1143 aa31.32■■■□□ 2.6
TRIM3-206ENST00000528227 NR2E3Q9Y5X4 410 aa31.32■■■□□ 2.6
TRIM3-206ENST00000528227 CEP290O15078 2479 aa31.32■■■□□ 2.6
TRIM3-206ENST00000528227 XRCC5P13010 732 aaKnown RBP31.31■■■□□ 2.6
TRIM3-206ENST00000528227 GUCY1A2P33402 732 aa31.31■■■□□ 2.6
TRIM3-206ENST00000528227 EVX2Q03828 476 aa31.31■■■□□ 2.6
TRIM3-206ENST00000528227 LCORLQ8N3X6 602 aa31.31■■■□□ 2.6
TRIM3-206ENST00000528227 PAWRQ96IZ0 340 aaKnown RBP31.31■■■□□ 2.6
TRIM3-206ENST00000528227 VCAM1P19320 739 aa31.3■■■□□ 2.6
TRIM3-206ENST00000528227 PDE3AQ14432 1141 aa31.3■■■□□ 2.6
TRIM3-206ENST00000528227 CATSPERGQ6ZRH7 1159 aa31.3■■■□□ 2.6
TRIM3-206ENST00000528227 GPR142Q7Z601 462 aa31.3■■■□□ 2.6
TRIM3-206ENST00000528227 CCAR1Q8IX12 1150 aaKnown RBP31.3■■■□□ 2.6
TRIM3-206ENST00000528227 SDR42E1Q8WUS8 393 aa31.3■■■□□ 2.6
TRIM3-206ENST00000528227 USP6NLQ92738 828 aa31.3■■■□□ 2.6
TRIM3-206ENST00000528227 DCP1AQ9NPI6 582 aaPredicted RBP31.3■■■□□ 2.6
TRIM3-206ENST00000528227 PAG1Q9NWQ8 432 aa31.3■■■□□ 2.6
TRIM3-206ENST00000528227 RABGAP1Q9Y3P9 1069 aa31.3■■■□□ 2.6
TRIM3-206ENST00000528227 MAP3K21Q5TCX8 1036 aa31.29■■■□□ 2.6
TRIM3-206ENST00000528227 ANKLE1Q8NAG6 615 aa31.29■■■□□ 2.6
TRIM3-206ENST00000528227 DIS3LQ8TF46 1054 aaKnown RBP31.29■■■□□ 2.6
TRIM3-206ENST00000528227 BOLA2Q9H3K6 86 aa31.29■■■□□ 2.6
TRIM3-206ENST00000528227 CNMDO75829 334 aa31.28■■■□□ 2.6
TRIM3-206ENST00000528227 ATP5JP18859 108 aa31.28■■■□□ 2.6
TRIM3-206ENST00000528227 MORN1Q5T089 497 aa31.28■■■□□ 2.6
TRIM3-206ENST00000528227 PLEKHH3Q7Z736 793 aa31.28■■■□□ 2.6
TRIM3-206ENST00000528227 TRMT44Q8IYL2 757 aaKnown RBP31.28■■■□□ 2.6
TRIM3-206ENST00000528227 RBM27Q9P2N5 1060 aaKnown RBP31.28■■■□□ 2.6
TRIM3-206ENST00000528227 EVI5O60447 810 aa31.27■■■□□ 2.6
TRIM3-206ENST00000528227 ADD2P35612 726 aa31.27■■■□□ 2.6
TRIM3-206ENST00000528227 SEPT2Q15019 361 aa31.27■■■□□ 2.6
TRIM3-206ENST00000528227 NECAB2Q7Z6G3 386 aa31.27■■■□□ 2.6
TRIM3-206ENST00000528227 ARMT1Q9H993 441 aa31.27■■■□□ 2.6
TRIM3-206ENST00000528227 PRKAR2AP13861 404 aaKnown RBP31.26■■■□□ 2.59
TRIM3-206ENST00000528227 RGS2P41220 211 aa31.26■■■□□ 2.59
TRIM3-206ENST00000528227 LBX2Q6XYB7 198 aa31.26■■■□□ 2.59
TRIM3-206ENST00000528227 HAUS7Q99871 368 aa31.26■■■□□ 2.59
TRIM3-206ENST00000528227 PRO3102Q9H379 93 aa31.26■■■□□ 2.59
TRIM3-206ENST00000528227 ALPK3Q96L96 1907 aa31.26■■■□□ 2.59
TRIM3-206ENST00000528227 CYP2D6P10635 497 aa31.25■■■□□ 2.59
TRIM3-206ENST00000528227 ZKSCAN1P17029 563 aaPredicted RBP31.25■■■□□ 2.59
TRIM3-206ENST00000528227 SLFNL1Q499Z3 407 aa31.25■■■□□ 2.59
TRIM3-206ENST00000528227 C20orf194Q5TEA3 1177 aa31.25■■■□□ 2.59
TRIM3-206ENST00000528227 RPAP3Q9H6T3 665 aaPredicted RBP31.25■■■□□ 2.59
TRIM3-206ENST00000528227 MPHOSPH10O00566 681 aaKnown RBP31.24■■■□□ 2.59
TRIM3-206ENST00000528227 CCNA1P78396 465 aa31.24■■■□□ 2.59
TRIM3-206ENST00000528227 APBA2Q99767 749 aa31.24■■■□□ 2.59
TRIM3-206ENST00000528227 OGDHLQ9ULD0 1010 aa31.24■■■□□ 2.59
TRIM3-206ENST00000528227 PRKAB2O43741 272 aa31.23■■■□□ 2.59
TRIM3-206ENST00000528227 MBD4O95243 580 aa31.23■■■□□ 2.59
TRIM3-206ENST00000528227 MNX1P50219 401 aaPredicted RBP31.23■■■□□ 2.59
TRIM3-206ENST00000528227 CCL14Q16627 93 aa31.23■■■□□ 2.59
TRIM3-206ENST00000528227 SLC44A5Q8NCS7 719 aa31.23■■■□□ 2.59
TRIM3-206ENST00000528227 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.23■■■□□ 2.59
TRIM3-206ENST00000528227 CWC22Q9HCG8 908 aaKnown RBP31.23■■■□□ 2.59
TRIM3-206ENST00000528227 SWAP70Q9UH65 585 aa31.23■■■□□ 2.59
TRIM3-206ENST00000528227 A0A1W2PRG0 241 aa31.22■■■□□ 2.59
TRIM3-206ENST00000528227 SPDYE16A6NNV3 312 aaPredicted RBP31.22■■■□□ 2.59
TRIM3-206ENST00000528227 CACNB2Q08289 660 aaPredicted RBP31.22■■■□□ 2.59
TRIM3-206ENST00000528227 BTBD7Q9P203 1132 aa31.22■■■□□ 2.59
TRIM3-206ENST00000528227 MAP2K5Q13163 448 aa31.21■■■□□ 2.59
TRIM3-206ENST00000528227 DYNLL2Q96FJ2 89 aa31.21■■■□□ 2.59
TRIM3-206ENST00000528227 LRRCC1Q9C099 1032 aa31.21■■■□□ 2.59
TRIM3-206ENST00000528227 NBPF3Q9H094 633 aa31.21■■■□□ 2.59
TRIM3-206ENST00000528227 ATP8A2Q9NTI2 1148 aa31.21■■■□□ 2.59
TRIM3-206ENST00000528227 MYH7P12883 1935 aa31.21■■■□□ 2.59
TRIM3-206ENST00000528227 MYH8P13535 1937 aa31.2■■■□□ 2.59
TRIM3-206ENST00000528227 TRIOBPQ9H2D6 2365 aa31.2■■■□□ 2.59
TRIM3-206ENST00000528227 GLRX3O76003 335 aaKnown RBP31.2■■■□□ 2.59
TRIM3-206ENST00000528227 CHGBP05060 677 aa31.2■■■□□ 2.59
TRIM3-206ENST00000528227 TMEM179Q6ZVK1 233 aa31.2■■■□□ 2.59
TRIM3-206ENST00000528227 BAZ2AQ9UIF9 1905 aaKnown RBP31.2■■■□□ 2.58
TRIM3-206ENST00000528227 UBE3CQ15386 1083 aa31.19■■■□□ 2.58
TRIM3-206ENST00000528227 WDR78Q5VTH9 848 aa31.18■■■□□ 2.58
TRIM3-206ENST00000528227 C11orf49Q9H6J7 331 aa31.18■■■□□ 2.58
TRIM3-206ENST00000528227 SLC15A5A6NIM6 579 aa31.17■■■□□ 2.58
TRIM3-206ENST00000528227 SMARCA5O60264 1052 aaPredicted RBP31.17■■■□□ 2.58
TRIM3-206ENST00000528227 PTPREP23469 700 aa31.17■■■□□ 2.58
TRIM3-206ENST00000528227 CCND3P30281 292 aaPredicted RBP31.17■■■□□ 2.58
TRIM3-206ENST00000528227 COG2Q14746 738 aa31.16■■■□□ 2.58
TRIM3-206ENST00000528227 C12orf60Q5U649 245 aa31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms